PDB: 462 件ウェブページステータス検索Chemie searchBIRD

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1Q8K	Solution structure of alpha subunit of human eIF2 分子名称: Eukaryotic translation initiation factor 2 subunit 1 著者 Ito, T, Marintchev, A, Wagner, G. 登録日 2003-08-21 公開日 2004-09-07 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution Structure of Human Initiation Factor eIF2alpha Reveals Homology to the Elongation Factor eEF1B. STRUCTURE, 12, 2004
5F6C	The structure of E. coli RNase E catalytically inactive mutant with RNA bound 分子名称: MAGNESIUM ION, RNA (5'-R(P*GP*U)-3'), RNA (5'-R(P*GP*UP*G)-3'), ... 著者 Bandyra, K.J, Luisi, B.F. 登録日 2015-12-05 公開日 2016-12-14 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.002 Å) 主引用文献 Substrate Recognition and Autoinhibition in the Central Ribonuclease RNase E. Mol. Cell, 72, 2018
1Q46	crystal structure of the eIF2 alpha subunit from saccharomyces cerevisia 分子名称: translation initiation factor 2 alpha subunit 著者 Dhaliwal, S, Hoffman, D.W. 登録日 2003-08-01 公開日 2003-10-28 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.86 Å) 主引用文献 The crystal structure of the N-terminal region of the alpha subunit of translation initiation factor 2 (eIF2alpha) from Saccharomyces cerevisiae provides a view of the loop containing serine 51, the target of the eIF2alpha-specific kinases. J.Mol.Biol., 334, 2003
3BZK	Crystal Structure of the Tex protein from Pseudomonas aeruginosa, crystal form 2 分子名称: Tex 著者 Johnson, S.J, Close, D, Hill, C.P. 登録日 2008-01-18 公開日 2008-04-08 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure and RNA binding of the Tex protein from Pseudomonas aeruginosa. J.Mol.Biol., 377, 2008
5LM9	Structure of E. coli NusA 分子名称: MAGNESIUM ION, SULFATE ION, Transcription termination/antitermination protein NusA 著者 Said, N, Weber, G, Santos, K, Wahl, M.C. 登録日 2016-07-29 公開日 2017-04-05 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.143 Å) 主引用文献 Structural basis for lambda N-dependent processive transcription antitermination. Nat Microbiol, 2, 2017
2VRT	Crystal Structure of E. coli RNase E possessing M1 RNA fragments - Catalytic Domain 分子名称: 5'-R(*UP*UP)-3', 5'-R(*UP*UP*GP)-3', RIBONUCLEASE E, ... 著者 Koslover, D.J, Callaghan, A.J, Marcaida, M.J, Garman, E.F, Martick, M, Scott, W.G, Luisi, B.F. 登録日 2008-04-14 公開日 2008-07-22 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 The Crystal Structure of the Escherichia Coli Rnase E Apoprotein and a Mechanism for RNA Degradation. Structure, 16, 2008
2OCE	Crystal structure of Tex family protein PA5201 from Pseudomonas aeruginosa 分子名称: Hypothetical protein PA5201 著者 Jin, X, Min, T, Burley, S.K, Shapiro, L, New York SGX Research Center for Structural Genomics (NYSGXRC) 登録日 2006-12-20 公開日 2007-01-02 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Crystal structure of hypothetical protein PA5201 from Pseudomonas aeruginosa To be Published
3BZC	Crystal Structure of the Tex protein from Pseudomonas aeruginosa, crystal form I 分子名称: Tex 著者 Johnson, S.J, Close, D, Hill, C.P. 登録日 2008-01-17 公開日 2008-04-08 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.27 Å) 主引用文献 Crystal structure and RNA binding of the Tex protein from Pseudomonas aeruginosa. J.Mol.Biol., 377, 2008
2C35	Subunits Rpb4 and Rpb7 of human RNA polymerase II 分子名称: DNA-DIRECTED RNA POLYMERASE II 16 KDA POLYPEPTIDE, DNA-DIRECTED RNA POLYMERASE II 19 KDA POLYPEPTIDE 著者 Meka, H, Werner, F, Cordell, S.C, Onesti, S, Brick, P. 登録日 2005-10-04 公開日 2005-11-18 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Crystal Structure and RNA Binding of the Rpb4/Rpb7 Subunits of Human RNA Polymerase II. Nucleic Acids Res., 33, 2005
2C0B	Catalytic domain of E. coli RNase E in complex with 13-mer RNA 分子名称: 5'-R(*UP*UP*UP*AP*CP*AP*GP*UP*AP*UP*UP*UP*G)-3', MAGNESIUM ION, RIBONUCLEASE E, ... 著者 Marcaida, M.J, Callaghan, A.J, Scott, W.G, Luisi, B.F. 登録日 2005-08-30 公開日 2005-10-14 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (3.18 Å) 主引用文献 Structure of E. Coli Rnase E Catalytic Domain and Implications for RNA Processing and Turnover Nature, 437, 2005
2BX2	Catalytic domain of E. coli RNase E 分子名称: MAGNESIUM ION, RIBONUCLEASE E, RNA (5'-R(*UP*UP*UP*AP*CP*AP*GP*UP*AP*UP*UP* UP*GP*UP*U)-3'), ... 著者 Marcaida, M.J, Callaghan, A.J, Scott, W.G, Luisi, B.F. 登録日 2005-07-21 公開日 2005-10-14 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.85 Å) 主引用文献 Structure of E. Coli Rnase E Catalytic Domain and Implications for RNA Processing and Turnover Nature, 437, 2005
2C4R	Catalytic domain of E. coli RNase E 分子名称: MAGNESIUM ION, RIBONUCLEASE E, SSRNA MOLECULE: 5'-R(*AP*CP*AP*GP*UP*AP*UP*UP*UP*GP)-3', ... 著者 Marcaida, M.J, Callaghan, A.J, Luisi, B.F. 登録日 2005-10-21 公開日 2005-10-25 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 Structure of E. Coli Rnase E Catalytic Domain and Implications for RNA Processing and Turnover Nature, 437, 2005
4MTN	Crystal structure of transcription termination factor NusA from Planctomyces limnophilus DSM 3776 分子名称: SULFATE ION, Transcription termination factor NusA 著者 Chang, C, Hatzos-Skintges, C, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) 登録日 2013-09-19 公開日 2013-10-02 最終更新日 2019-07-17 実験手法 X-RAY DIFFRACTION (2.579 Å) 主引用文献 Crystal structure of transcription termination factor NusA from Planctomyces limnophilus DSM 3776 TO BE PUBLISHED
8B0J	CryoEM structure of bacterial RNaseE.RapZ.GlmZ complex central to the control of cell envelope biogenesis 分子名称: GlmZ small RNA, RNase adapter protein RapZ, Ribonuclease E 著者 Islam, M.S, Hardwick, H.W, Chirgadze, D.Y, Luisi, B.F. 登録日 2022-09-07 公開日 2022-10-05 最終更新日 2023-01-25 実験手法 ELECTRON MICROSCOPY (3.99 Å) 主引用文献 Structure of a bacterial ribonucleoprotein complex central to the control of cell envelope biogenesis. Embo J., 42, 2023
2IX1	RNase II D209N mutant 分子名称: 5'-D(*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP *AP*AP*A)-3', EXORIBONUCLEASE 2, MAGNESIUM ION 著者 Frazao, C, McVey, C.E, Amblar, M, Barbas, A, Vonrhein, C, Arraiano, C.M, Carrondo, M.A. 登録日 2006-07-05 公開日 2006-10-05 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.74 Å) 主引用文献 Unravelling the Dynamics of RNA Degradation by Ribonuclease II and its RNA-Bound Complex Nature, 443, 2006
2IX0	RNase II 分子名称: CALCIUM ION, CYTIDINE-5'-MONOPHOSPHATE, EXORIBONUCLEASE 2, ... 著者 Frazao, C, Mcvey, C.E, Amblar, M, Barbas, A, Vonrhein, C, Arraiano, C.M, Carrondo, M.A. 登録日 2006-07-05 公開日 2006-10-05 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.44 Å) 主引用文献 Unravelling the Dynamics of RNA Degradation by Ribonuclease II and its RNA-Bound Complex Nature, 7, 2006
1YZ6	Crystal structure of intact alpha subunit of aIF2 from Pyrococcus abyssi 分子名称: Probable translation initiation factor 2 alpha subunit 著者 Yatime, L, Schmitt, E, Blanquet, S, Mechulam, Y. 登録日 2005-02-28 公開日 2005-06-28 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (3.37 Å) 主引用文献 Structure-Function Relationships of the Intact aIF2alpha Subunit from the Archaeon Pyrococcus abyssi Biochemistry, 44, 2005
2ID0	Escherichia coli RNase II 分子名称: Exoribonuclease 2, MANGANESE (II) ION 著者 Zuo, Y, Zhang, J, Wang, Y, Malhotra, A. 登録日 2006-09-13 公開日 2006-10-03 最終更新日 2017-10-18 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Structural Basis for Processivity and Single-Strand Specificity of RNase II. Mol.Cell, 24, 2006
1Y14	Crystal structure of yeast subcomplex of Rpb4 and Rpb7 分子名称: DNA-directed RNA polymerase II 19 kDa polypeptide, DNA-directed RNA polymerase II 32 kDa polypeptide 著者 Armache, K.-J, Mitterweger, S, Meinhart, A, Cramer, P. 登録日 2004-11-17 公開日 2004-12-14 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structures of Complete RNA Polymerase II and Its Subcomplex, Rpb4/7 J.Biol.Chem., 280, 2005
6G63	RNase E in complex with sRNA RrpA 分子名称: RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3'), Ribonuclease E, URIDINE-5'-MONOPHOSPHATE, ... 著者 Bandyra, K.B, Luisi, B.F. 登録日 2018-03-31 公開日 2018-10-03 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.95 Å) 主引用文献 Substrate Recognition and Autoinhibition in the Central Ribonuclease RNase E. Mol. Cell, 72, 2018
7DCY	Apo form of Mycoplasma genitalium RNase R 分子名称: MAGNESIUM ION, Ribonuclease R 著者 Abula, A, Quan, X, Li, X, Yang, T, Li, T, Chen, Q, Ji, X. 登録日 2020-10-27 公開日 2021-03-17 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.972 Å) 主引用文献 Molecular mechanism of RNase R substrate sensitivity for RNA ribose methylation. Nucleic Acids Res., 49, 2021
7DIC	Mycoplasma genitalium RNase R in complex with single-stranded RNA 分子名称: MAGNESIUM ION, RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), Ribonuclease R 著者 Abula, A, Quan, X, Li, X, Yang, T, Li, T, Chen, Q, Ji, X. 登録日 2020-11-18 公開日 2021-03-17 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.242 Å) 主引用文献 Molecular mechanism of RNase R substrate sensitivity for RNA ribose methylation. Nucleic Acids Res., 49, 2021
7DOL	Mycoplasma genitalium RNase R in complex with double-stranded RNA 分子名称: MAGNESIUM ION, RNA (5'-R(P*AP*AP*AP*AP*AP*A)-3'), Ribonuclease R 著者 Abula, A, Quan, X, Li, X, Yang, T, Li, T, Chen, Q, Ji, X. 登録日 2020-12-14 公開日 2021-03-17 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.002 Å) 主引用文献 Molecular mechanism of RNase R substrate sensitivity for RNA ribose methylation. Nucleic Acids Res., 49, 2021
7DID	Mycoplasma genitalium RNase R in complex with ribose methylated single-stranded RNA 分子名称: MAGNESIUM ION, RNA (5'-R(*AP*AP*AP*A)-3'), Ribonuclease R 著者 Abula, A, Quan, X, Li, X, Yang, T, Li, T, Chen, Q, Ji, X. 登録日 2020-11-18 公開日 2021-03-17 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Molecular mechanism of RNase R substrate sensitivity for RNA ribose methylation. Nucleic Acids Res., 49, 2021
7NZM	Cryo-EM structure of pre-dephosphorylation complex of phosphorylated eIF2alpha with trapped holophosphatase (PP1A_D64A/PPP1R15A/G-actin/DNase I) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-TRIPHOSPHATE, Actin, ... 著者 Yan, Y, Hardwick, S, Ron, D. 登録日 2021-03-24 公開日 2021-09-29 最終更新日 2021-10-20 実験手法 ELECTRON MICROSCOPY (3.96 Å) 主引用文献 Higher-order phosphatase-substrate contacts terminate the integrated stress response. Nat.Struct.Mol.Biol., 28, 2021

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