PDB: 42250 件ウェブページステータス検索Chemie searchBIRD

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6ID0	Cryo-EM structure of a human intron lariat spliceosome prior to Prp43 loaded (ILS1 complex) at 2.9 angstrom resolution 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, CWF19-like protein 2, Cell division cycle 5-like protein, ... 著者 Zhang, X, Zhan, X, Yan, C, Shi, Y. 登録日 2018-09-07 公開日 2019-03-13 最終更新日 2024-10-30 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Structures of the human spliceosomes before and after release of the ligated exon. Cell Res., 29, 2019
5CXS	Crystal Structure of Isoform 2 of Purine Nucleoside Phosphorylase complexed with MES 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Purine nucleoside phosphorylase 著者 Torini, J.R, Romanello, L, Bird, L, Owens, R, Brandao-Neto, J, Pereira, H.M. 登録日 2015-07-29 公開日 2016-08-03 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 The molecular structure of Schistosoma mansoni PNP isoform 2 provides insights into the nucleoside selectivity of PNPs. PLoS ONE, 13, 2018
5B7P	Structures and functional analysis of periplasmic 5-methylthioadenosine/S-adenosylhomocysteine nucleosidase from Aeromonas hydrophila 分子名称: 5'-DEOXY-5'-METHYLTHIOADENOSINE, MTA/SAH nucleosidase 著者 Xu, Y. 登録日 2016-06-08 公開日 2016-12-14 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.49 Å) 主引用文献 Structural and Functional Analyses of Periplasmic 5'-Methylthioadenosine/S-Adenosylhomocysteine Nucleosidase from Aeromonas hydrophila. Biochemistry, 56, 2017
5B7G	Structures and functional analysis of periplasmic 5-methylthioadenosine/S-adenosylhomocysteine nucleosidase from Aeromonas hydrophila 分子名称: ADENINE, GLYCEROL, MTA/SAH nucleosidase 著者 Xu, Y. 登録日 2016-06-07 公開日 2017-01-25 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.399 Å) 主引用文献 Structural and Functional Analyses of Periplasmic 5'-Methylthioadenosine/S-Adenosylhomocysteine Nucleosidase from Aeromonas hydrophila. Biochemistry, 56, 2017
2BTJ	Fluorescent Protein EosFP - red form 分子名称: Green to red photoconvertible GFP-like protein EosFP 著者 Nar, H, Nienhaus, K, Wiedenmann, J, Nienhaus, G.U. 登録日 2005-06-01 公開日 2005-06-23 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural Basis for Photo-Induced Protein Cleavage and Green-to-Red Conversion of Fluorescent Protein Eosfp. Proc.Natl.Acad.Sci.USA, 102, 2005
3GYV	Crystal structure of nucleosome assembly protein from Plasmodium falciparum 分子名称: IODIDE ION, Nucleosome assembly protein 1, putative 著者 Yogavel, M, Gill, J, Sharma, A. 登録日 2009-04-06 公開日 2009-05-12 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Iodide-SAD, SIR and SIRAS phasing for structure solution of a nucleosome assembly protein. Acta Crystallogr.,Sect.D, 65, 2009
5B7N	Crystal structure of periplasmic 5-methylthioadenosine/S-adenosylhomocysteine nucleosidase from Aeromonas hydrophila 分子名称: GLYCEROL, MTA/SAH nucleosidase, S-ADENOSYL-L-HOMOCYSTEINE 著者 Xu, Y. 登録日 2016-06-08 公開日 2016-12-21 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.399 Å) 主引用文献 Structural and Functional Analyses of Periplasmic 5'-Methylthioadenosine/S-Adenosylhomocysteine Nucleosidase from Aeromonas hydrophila. Biochemistry, 56, 2017
4A2Y	STRUCTURE OF THE HUMAN EOSINOPHIL CATIONIC PROTEIN IN COMPLEX WITH CITRATE ANIONS 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CITRIC ACID, EOSINOPHIL CATIONIC PROTEIN 著者 Boix, E, Pulido, D, Moussaoui, M, Nogues, V, Russi, S. 登録日 2011-09-29 公開日 2012-06-27 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 The Sulfate-Binding Site Structure of the Human Eosinophil Cationic Protein as Revealed by a New Crystal Form. J.Struct.Biol., 179, 2012
5B7Q	Structures and functional analysis of periplasmic 5-methylthioadenosine/S-adenosylhomocysteine nucleosidase from Aeromonas hydrophila 分子名称: 5'-DEOXYADENOSINE, MTA/SAH nucleosidase 著者 Xu, Y. 登録日 2016-06-08 公開日 2016-12-14 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.493 Å) 主引用文献 Structural and Functional Analyses of Periplasmic 5'-Methylthioadenosine/S-Adenosylhomocysteine Nucleosidase from Aeromonas hydrophila. Biochemistry, 56, 2017
1A9N	CRYSTAL STRUCTURE OF THE SPLICEOSOMAL U2B''-U2A' PROTEIN COMPLEX BOUND TO A FRAGMENT OF U2 SMALL NUCLEAR RNA 分子名称: RNA (5'-R(*CP*CP*UP*GP*GP*UP*AP*UP*UP*GP*CP*AP*GP*UP*AP*CP*CP*UP*CP*CP*AP*GP* GP*U)-3'), SPLICEOSOMAL U2B'', U2A' 著者 Price, S.R, Evans, P.R, Nagai, K. 登録日 1998-04-08 公開日 1998-09-23 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (2.38 Å) 主引用文献 Crystal structure of the spliceosomal U2B"-U2A' protein complex bound to a fragment of U2 small nuclear RNA. Nature, 394, 1998
7U9H	Crystal Structure of Escherichia coli apo Pyridoxal 5'-phosphate homeostasis protein (YGGS) 分子名称: Pyridoxal phosphate homeostasis protein, SULFATE ION 著者 Donkor, A.K, Ghatge, M.S, Musayev, F.N, Safo, M.K. 登録日 2022-03-10 公開日 2022-03-23 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Characterization of the Escherichia coli pyridoxal 5'-phosphate homeostasis protein (YggS): Role of lysine residues in PLP binding and protein stability. Protein Sci., 31, 2022
7U9C	Crystal Structure of the wild type Escherichia coli Pyridoxal 5'-phosphate homeostasis protein (YGGS) 分子名称: PHOSPHATE ION, PYRIDOXAL-5'-PHOSPHATE, Pyridoxal phosphate homeostasis protein 著者 Donkor, A.K, Ghatge, M.S, Safo, M.K, Musayev, F.N. 登録日 2022-03-10 公開日 2022-03-23 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Characterization of the Escherichia coli pyridoxal 5'-phosphate homeostasis protein (YggS): Role of lysine residues in PLP binding and protein stability. Protein Sci., 31, 2022
2YFD	STRUCTURAL AND FUNCTIONAL INSIGHTS OF DR2231 PROTEIN, THE MAZG-LIKE NUCLEOSIDE TRIPHOSPHATE PYROPHOSPHOHYDROLASE FROM DEINOCOCCUS RADIODURANS, COMPLEXED WITH Mg and dUMP 分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, ACETATE ION, CHLORIDE ION, ... 著者 Goncalves, A.M.D, De Sanctis, D, Mcsweeney, S.M. 登録日 2011-04-05 公開日 2011-07-06 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.767 Å) 主引用文献 Structural and Functional Insights Into Dr2231 Protein, the Mazg-Like Nucleoside Triphosphate Pyrophosphohydrolase from Deinococcus Radiodurans. J.Biol.Chem., 286, 2011
2YF9	STRUCTURAL AND FUNCTIONAL INSIGHTS OF DR2231 PROTEIN, THE MAZG-LIKE NUCLEOSIDE TRIPHOSPHATE PYROPHOSPHOHYDROLASE FROM DEINOCOCCUS RADIODURANS, NATIVE FORM 分子名称: CHLORIDE ION, MAZG-LIKE NUCLEOSIDE TRIPHOSPHATE PYROPHOSPHOHYDROLASE 著者 Goncalves, A.M.D, De Sanctis, D, Mcsweeney, S.M. 登録日 2011-04-04 公開日 2011-07-06 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.899 Å) 主引用文献 Structural and Functional Insights Into Dr2231 Protein, the Mazg-Like Nucleoside Triphosphate Pyrophosphohydrolase from Deinococcus Radiodurans. J.Biol.Chem., 286, 2011
4R3F	Structure of the spliceosomal peptidyl-prolyl cis-trans isomerase Cwc27 from Chaetomium thermophilum 分子名称: 1,2-ETHANEDIOL, 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, ACETATE ION, ... 著者 Ulrich, A, Wahl, M.C. 登録日 2014-08-15 公開日 2014-11-19 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Structure and evolution of the spliceosomal peptidyl-prolyl cis-trans isomerase Cwc27. Acta Crystallogr.,Sect.D, 70, 2014
3B6B	Crystal structure of Acanthamoeba polyphaga mimivirus nucleoside diphosphate kinase complexed with dGDP 分子名称: 2'-DEOXYGUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Nucleoside diphosphate kinase 著者 Jeudy, S, Lartigue, A, Claverie, J.M, Abergel, C. 登録日 2007-10-28 公開日 2008-11-04 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Dissecting the unique nucleotide specificity of mimivirus nucleoside diphosphate kinase. J.Virol., 83, 2009
1ZOI	Crystal Structure of a Stereoselective Esterase from Pseudomonas putida IFO12996 分子名称: esterase 著者 Elmi, F, Lee, H.T, Huang, J.Y, Hsieh, Y.C, Wang, Y.L, Chen, Y.J, Shaw, S.Y, Chen, C.J. 登録日 2005-05-13 公開日 2006-05-02 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Stereoselective esterase from Pseudomonas putida IFO12996 reveals alpha/beta hydrolase folds for D-beta-acetylthioisobutyric acid synthesis J.Bacteriol., 187, 2005
9FMD	Integrative model of the human post-catalytic spliceosome (P-complex) 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent RNA helicase DHX8, ... 著者 Rothe, P, Plaschka, C, Vorlaender, M.K. 登録日 2024-06-05 公開日 2024-07-10 最終更新日 2024-12-11 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Mechanism for the initiation of spliceosome disassembly. Nature, 632, 2024
7DVQ	Cryo-EM Structure of the Activated Human Minor Spliceosome (minor Bact Complex) 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, 5'-O-[(S)-hydroxy{[(R)-hydroxy{[(S)-hydroxy(methoxy)phosphoryl]oxy}phosphoryl]oxy}phosphoryl]guanosine, Armadillo repeat-containing protein 7, ... 著者 Bai, R, Wan, R, Wang, L, Xu, K, Zhang, Q, Lei, J, Shi, Y. 登録日 2021-01-14 公開日 2021-03-31 最終更新日 2024-11-13 実験手法 ELECTRON MICROSCOPY (2.89 Å) 主引用文献 Structure of the activated human minor spliceosome. Science, 371, 2021
8OS9	Structure of Homo sapiens 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 (DNPH1) 分子名称: 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 著者 Devi, S, da Silva, R.G. 登録日 2023-04-18 公開日 2023-08-30 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Human 2'-Deoxynucleoside 5'-Phosphate N -Hydrolase 1: Mechanism of 2'-Deoxyuridine 5'-Monophosphate Hydrolysis. Biochemistry, 62, 2023
8OSC	Structure of Homo sapiens 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 (DNPH1) bound to deoxyuridine 5'- monophosphate 分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 著者 Devi, S, da Silva, R.G. 登録日 2023-04-18 公開日 2023-08-30 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.42 Å) 主引用文献 Human 2'-Deoxynucleoside 5'-Phosphate N -Hydrolase 1: Mechanism of 2'-Deoxyuridine 5'-Monophosphate Hydrolysis. Biochemistry, 62, 2023
7VPX	The cryo-EM structure of the human pre-A complex 分子名称: 5SS, DnaJ homolog subfamily C member 8, PHD finger-like domain-containing protein 5A, ... 著者 Zhang, X, Zhan, X, Shi, Y. 登録日 2021-10-18 公開日 2023-05-03 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structural insights into branch site proofreading by human spliceosome. Nat.Struct.Mol.Biol., 2024
8QVY	Human NDPK-C unliganded 分子名称: Nucleoside diphosphate kinase 3, PHOSPHATE ION 著者 Werten, S, Amjadi, R, Scheffzek, K. 登録日 2023-10-18 公開日 2024-09-18 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (2.64 Å) 主引用文献 Mechanistic Insights into Substrate Recognition of Human Nucleoside Diphosphate Kinase C Based on Nucleotide-Induced Structural Changes. Int J Mol Sci, 25, 2024
8ZOJ	The crystal structure of YegTK267A from the Nucleoside: H+ Symporter Family 分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Putative nucleoside transporter YegT 著者 Xiao, Q.J, Deng, D. 登録日 2024-05-28 公開日 2025-04-02 最終更新日 2025-04-09 実験手法 X-RAY DIFFRACTION (2.913 Å) 主引用文献 Mechanistic insights into proton-coupled substrate translocation of nucleoside proton symporters. J.Biol.Chem., 301, 2025
7ZSO	human purine nucleoside phosphorylase in complex with JS-554 分子名称: GLYCEROL, Purine nucleoside phosphorylase, SODIUM ION, ... 著者 Djukic, S, Pachl, P, Rezacova, P. 登録日 2022-05-07 公開日 2023-05-17 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Design, Synthesis, Biological Evaluation, and Crystallographic Study of Novel Purine Nucleoside Phosphorylase Inhibitors. J.Med.Chem., 66, 2023

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