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1R6A
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Structure of the dengue virus 2'O methyltransferase in complex with s-adenosyl homocysteine and ribavirin 5' triphosphate
分子名称: Genome polyprotein, RIBAVIRIN MONOPHOSPHATE, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Benarroch, D, Egloff, M.P, Mulard, L, Romette, J.L, Canard, B.
登録日2003-10-15
公開日2004-09-21
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A structural basis for the inhibition of the NS5 dengue virus mRNA 2'-O-methyltransferase domain by ribavirin 5'-triphosphate.
J.Biol.Chem., 279, 2004
1OK4
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Archaeal fructose 1,6-bisphosphate aldolase covalently bound to the substrate dihydroxyacetone phosphate
分子名称: 1,3-DIHYDROXYACETONEPHOSPHATE, FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS I
著者Lorentzen, E, Zwart, P, Stark, A, Hensel, R, Siebers, B, Pohl, E.
登録日2003-07-17
公開日2003-09-04
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of an archaeal class I aldolase and the evolution of (betaalpha)8 barrel proteins.
J. Biol. Chem., 278, 2003
1OK6
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Orthorhombic crystal form of an Archaeal fructose 1,6-bisphosphate aldolase
分子名称: FRUCTOSE-BISPHOSPHATE ALDOLASE CLASS I, GLYCEROL
著者Lorentzen, E, Zwart, P, Stark, A, Hensel, R, Siebers, B, Pohl, E.
登録日2003-07-18
公開日2003-09-04
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of an archaeal class I aldolase and the evolution of (betaalpha)8 barrel proteins.
J. Biol. Chem., 278, 2003
1RF4
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BU of 1rf4 by Molmil
Structural Studies of Streptococcus pneumoniae EPSP Synthase, Tetrahedral intermediate Bound State
分子名称: (3R,4S,5R)-5-{[(1R)-1-CARBOXY-2-FLUORO-1-(PHOSPHONOOXY)ETHYL]OXY}-4-HYDROXY-3-(PHOSPHONOOXY)CYCLOHEX-1-ENE-1-CARBOXYLIC ACID, 5-enolpyruvylshikimate-3-phosphate synthase
著者Park, H, Hilsenbeck, J.L, Kim, H.J, Shuttleworth, W.A, Park, Y.H, Evans, J.N, Kang, C.
登録日2003-11-07
公開日2004-02-17
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural studies of Streptococcus pneumoniae EPSP synthase in unliganded state, tetrahedral intermediate-bound state and S3P-GLP-bound state.
Mol.Microbiol., 51, 2004
2DMY
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BU of 2dmy by Molmil
Solution structure of DSRM domain in Spermatid perinuclear RNA-bind protein
分子名称: Spermatid perinuclear RNA-binding protein
著者Kadirvel, S, He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-04-24
公開日2006-10-24
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of DSRM domain in Spermatid perinuclear RNA-bind protein
To be Published
1PC6
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BU of 1pc6 by Molmil
Structural Genomics, NinB
分子名称: BETA-MERCAPTOETHANOL, Protein ninB
著者Zhang, R, Beasley, S, Maxwell, K.L, Edwards, A.M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2003-05-15
公開日2004-01-20
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Functional similarities between phage lambda Orf and Escherichia coli RecFOR in initiation of genetic exchange
Proc.Natl.Acad.Sci.USA, 102, 2005
1PCM
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BU of 1pcm by Molmil
Enzyme-ligand complex of P. aeruginosa PMM/PGM
分子名称: 6-O-phosphono-alpha-D-mannopyranose, Phosphomannomutase, ZINC ION
著者Regni, C, Tipton, P.A, Beamer, L.J.
登録日2003-05-16
公開日2004-01-20
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis of diverse substrate recognition by the enzyme PMM/PGM from P. aeruginosa.
Structure, 12, 2004
2DSA
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BU of 2dsa by Molmil
Ternary complex of BphK, a bacterial GST
分子名称: (2Z,4E)-2-HYDROXY-6-OXO-6-PHENYLHEXA-2,4-DIENOIC ACID, GLUTATHIONE, Glutathione S-transferase
著者Tocheva, E.I, Murphy, M.E.P.
登録日2006-06-24
公開日2006-08-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structures of ternary complexes of BphK, a bacterial glutathione S-transferase that reductively dechlorinates polychlorinated biphenyl metabolites
J.Biol.Chem., 281, 2006
1PI3
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BU of 1pi3 by Molmil
E28Q mutant Benzoylformate Decarboxylase From Pseudomonas Putida
分子名称: 2-{3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-4-METHYL-2-OXO-2,3-DIHYDRO-1,3-THIAZOL-5-YL}ETHYL TRIHYDROGEN DIPHOSPHATE, Benzoylformate decarboxylase, CALCIUM ION, ...
著者Bera, A.K, Hasson, M.S.
登録日2003-05-29
公開日2004-11-23
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献High resolution structure of Benzoylformate Decarboxylate E28Q mutant
To be Published
1PCJ
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BU of 1pcj by Molmil
Enzyme-ligand complex of P. aeruginosa PMM/PGM
分子名称: 1-O-phosphono-alpha-D-mannopyranose, Phosphomannomutase, ZINC ION
著者Regni, C, Tipton, P.A, Beamer, L.J.
登録日2003-05-16
公開日2004-01-20
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis of diverse substrate recognition by the enzyme PMM/PGM from P. aeruginosa.
Structure, 12, 2004
2DWD
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BU of 2dwd by Molmil
crystal structure of KcsA-FAB-TBA complex in Tl+
分子名称: (2S)-3-HYDROXY-2-(NONANOYLOXY)PROPYL LAURATE, ANTIBODY FAB HEAVY CHAIN, ANTIBODY FAB LIGHT CHAIN, ...
著者Yohannan, S, Zhou, Y.
登録日2006-08-10
公開日2007-02-20
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystallographic Study of the Tetrabutylammonium Block to the KcsA K(+) Channel
J.Mol.Biol., 366, 2007
2DH4
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BU of 2dh4 by Molmil
Geranylgeranyl pyrophosphate synthase
分子名称: MAGNESIUM ION, YPL069C
著者Chang, T.-H, Guo, R.-T, Ko, T.-P, Wang, A.H, Liang, P.-H.
登録日2006-03-22
公開日2006-04-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Crystal Structure of Type-III Geranylgeranyl Pyrophosphate Synthase from Saccharomyces cerevisiae and the Mechanism of Product Chain Length Determination.
J.Biol.Chem., 281, 2006
1PEW
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BU of 1pew by Molmil
High Resolution Crystal Structure of Jto2, a mutant of the non-amyloidogenic Lamba6 Light Chain, Jto
分子名称: CADMIUM ION, Jto2, a LAMBDA-6 TYPE IMMUNOGLOBULIN LIGHT CHAIN, ...
著者Dealwis, C, Gupta, V, Wilkerson, M.
登録日2003-05-22
公開日2004-07-13
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural basis of light chain amyloidogenicity: comparison of the thermodynamic properties, fibrillogenic potential and tertiary structural features of four V(lambda)6 proteins
J.Mol.Recog., 17, 2004
2DK6
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BU of 2dk6 by Molmil
Solution structure of WWE domain in poly (ADP-ribose) polymerase family, member 11 (PARP 11)
分子名称: PARP11 protein
著者He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-04-06
公開日2007-04-24
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of WWE domain in poly (ADP-ribose) polymerase family, member 11 (PARP 11)
To be Published
2DWE
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BU of 2dwe by Molmil
Crystal structure of KcsA-FAB-TBA complex in Rb+
分子名称: (2S)-3-HYDROXY-2-(NONANOYLOXY)PROPYL LAURATE, ANTIBODY FAB HEAVY CHAIN, ANTIBODY FAB LIGHT CHAIN, ...
著者Yohannan, S, Zhou, Y.
登録日2006-08-10
公開日2007-02-20
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystallographic Study of the Tetrabutylammonium Block to the KcsA K(+) Channel
J.Mol.Biol., 366, 2007
2DK7
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BU of 2dk7 by Molmil
Solution structure of WW domain in transcription elongation regulator 1
分子名称: Transcription elongation regulator 1
著者He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-04-06
公開日2007-04-24
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of WW domain in transcription elongation regulator 1
To be Published
1PI8
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Structure of the channel-forming trans-membrane domain of Virus protein "u" (Vpu) from HIV-1
分子名称: VPU protein
著者Park, S.H, Mrse, A.A, Nevzorov, A.A, Mesleh, M.F, Oblatt-Montal, M, Montal, M, Opella, S.J.
登録日2003-05-29
公開日2003-11-11
最終更新日2024-05-22
実験手法SOLID-STATE NMR
主引用文献Three-dimensional structure of the channel-forming trans-membrane domain of virus protein "u" (Vpu) from HIV-1
J.Mol.Biol., 333, 2003
1UFN
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BU of 1ufn by Molmil
Solution structure of the SAND domain of the putative nuclear protein homolog (5830484A20Rik)
分子名称: putative nuclear protein homolog 5830484A20Rik
著者Tochio, N, Kobayashi, N, Koshiba, S, Kigawa, T, Inoue, M, Shirouzu, M, Terada, T, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Yoshida, M, Tanaka, A, Osanai, T, Matsuo, Y, Arakawa, T, Carninci, P, Kawai, J, Hayashizaki, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-06-02
公開日2004-06-22
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of the SAND domain of the putative nuclear protein homolog (5830484A20Rik)
To be Published
1U1X
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Structure and function of phenazine-biosynthesis protein PhzF from Pseudomonas fluorescens 2-79
分子名称: (2S,3S)-TRANS-2,3-DIHYDRO-3-HYDROXYANTHRANILIC ACID, Phenazine biosynthesis protein phzF
著者Blankenfeldt, W, Kuzin, A.P, Skarina, T, Korniyenko, Y, Tong, L, Bayer, P, Janning, P, Thomashow, L.S, Mavrodi, D.V.
登録日2004-07-16
公開日2004-11-02
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Structure and function of the phenazine biosynthetic protein PhzF from Pseudomonas fluorescens.
Proc.Natl.Acad.Sci.USA, 101, 2004
1PIX
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BU of 1pix by Molmil
Crystal structure of the carboxyltransferase subunit of the bacterial ion pump glutaconyl-coenzyme A decarboxylase
分子名称: FORMIC ACID, Glutaconyl-CoA decarboxylase A subunit, SULFATE ION
著者Wendt, K.S, Schall, I, Huber, R, Buckel, W, Jacob, U.
登録日2003-05-30
公開日2003-08-05
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of the carboxyltransferase subunit of the bacterial sodium ion pump glutaconyl-coenzyme A decarboxylase
Embo J., 22, 2003
2BIT
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BU of 2bit by Molmil
Crystal structure of human cyclophilin D at 1.7 A resolution
分子名称: PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
著者Hennig, M, Thoma, R, Stihle, M, Schlatter, D.
登録日2005-01-26
公開日2005-01-26
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Crystal Engineering Yields Crystals of Cyclophilin D Diffracting to 1.7 A Resolution
Acta Crystallogr.,Sect.D, 61, 2005
2C26
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Structural basis for the promiscuous specificity of the carbohydrate- binding modules from the beta-sandwich super family
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, ENDOGLUCANASE
著者Najmudin, S, Guerreiro, C.I.P.D, Carvalho, A.L, Bolam, D.N, Prates, J.A.M, Correia, M.A.S, Alves, V.D, Ferreira, L.M.A, Romao, M.J, Gilbert, H.J, Fontes, C.M.G.A.
登録日2005-09-26
公開日2005-10-18
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Xyloglucan is Recognized by Carbohydrate-Binding Modules that Interact with Beta-Glucan Chains.
J.Biol.Chem., 281, 2006
2C4X
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Structural basis for the promiscuous specificity of the carbohydrate- binding modules from the beta-sandwich super family
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, ENDOGLUCANASE
著者Najmudin, S, Guerreiro, C.I.P.D, Carvalho, A.L, Bolam, D.N, Prates, J.A.M, Correia, M.A.S, Alves, V.D, Ferreira, L.M.A, Romao, M.J, Gilbert, H.J, Fontes, C.M.G.A.
登録日2005-10-25
公開日2005-10-27
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Xyloglucan is Recognized by Carbohydrate-Binding Modules that Interact with Beta-Glucan Chains.
J.Biol.Chem., 281, 2006
1UFM
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BU of 1ufm by Molmil
Solution structure of the PCI domain
分子名称: COP9 complex subunit 4
著者Suzuki, S, Hatanaka, H, Kigawa, T, Shirouzu, M, Hayashizaki, Y, The RIKEN Genome Exploration Research Group Phase I & II Teams, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-06-02
公開日2004-06-29
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of the PCI domain
To be Published
1NP3
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Crystal structure of class I acetohydroxy acid isomeroreductase from Pseudomonas aeruginosa
分子名称: Ketol-acid reductoisomerase
著者Ahn, H.J, Eom, S.J, Yoon, H.-J, Lee, B.I, Cho, H, Suh, S.W.
登録日2003-01-17
公開日2003-05-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of Class I Acetohydroxy Acid Isomeroreductase from Pseudomonas aeruginosa
J.Mol.Biol., 328, 2003

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