Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8GZW
DownloadVisualize
BU of 8gzw by Molmil
Klebsiella pneumoniae FtsZ complexed with monobody (P21)
分子名称: Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE, Monobody
著者Matsumura, H, Yoshizawa, T, Fujita, J, Tanaka, S, Amesaka, H.
登録日2022-09-27
公開日2023-07-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structures of a FtsZ single protofilament and a double-helical tube in complex with a monobody.
Nat Commun, 14, 2023
8GZV
DownloadVisualize
BU of 8gzv by Molmil
Klebsiella pneumoniae FtsZ complexed with monobody (P212121)
分子名称: Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE, Monobody
著者Matsumura, H, Yoshizawa, T, Fujita, J, Tanaka, S, Amesaka, H.
登録日2022-09-27
公開日2023-07-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structures of a FtsZ single protofilament and a double-helical tube in complex with a monobody.
Nat Commun, 14, 2023
8GZU
DownloadVisualize
BU of 8gzu by Molmil
Cryo-EM structure of Tetrahymena thermophila respiratory Megacomplex MC (IV2+I+III2+II)2
分子名称: 2 iron, 2 sulfur cluster-binding protein, 2-oxoglutarate/malate carrier protein, ...
著者Wu, M.C, Hu, Y.Q, Han, F.Z, Zhou, L.
登録日2022-09-27
公開日2023-06-14
実験手法ELECTRON MICROSCOPY (4.18 Å)
主引用文献Structures of Tetrahymena thermophila respiratory megacomplexes on the tubular mitochondrial cristae.
Nat Commun, 14, 2023
8GZR
DownloadVisualize
BU of 8gzr by Molmil
Cryo-EM structure of the the NS5-NS3 RNA-elongation complex
分子名称: CYTIDINE-5'-DIPHOSPHATE, Genome polyprotein, MANGANESE (II) ION, ...
著者Osawa, T, Ehara, H, Sekine, S.
登録日2022-09-27
公開日2023-08-02
最終更新日2023-08-23
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structures of dengue virus RNA replicase complexes.
Mol.Cell, 83, 2023
8GZQ
DownloadVisualize
BU of 8gzq by Molmil
Cryo-EM structure of the NS5-NS3-SLA complex
分子名称: GUANOSINE-5'-DIPHOSPHATE, Genome polyprotein, RNA, ...
著者Osawa, T, Ehara, H, Sekine, S.
登録日2022-09-27
公開日2023-08-02
最終更新日2023-08-23
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structures of dengue virus RNA replicase complexes.
Mol.Cell, 83, 2023
8GZP
DownloadVisualize
BU of 8gzp by Molmil
Cryo-EM structure of the NS5-SLA complex
分子名称: GUANOSINE-5'-DIPHOSPHATE, Genome polyprotein, MAGNESIUM ION, ...
著者Osawa, T, Ehara, H, Sekine, S.
登録日2022-09-27
公開日2023-08-02
最終更新日2023-08-23
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structures of dengue virus RNA replicase complexes.
Mol.Cell, 83, 2023
8GZN
DownloadVisualize
BU of 8gzn by Molmil
IgM-var2CSA complex
分子名称: Erythrocyte membrane protein 1, Immunoglobulin J chain, Immunoglobulin heavy constant mu
著者Akhouri, R.R, Goel, S, Skoglund, U.
登録日2022-09-27
公開日2023-10-25
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Cryo-electron microscopy of IgM-VAR2CSA complex reveals IgM inhibits binding of Plasmodium falciparum to Chondroitin Sulfate A.
Nat Commun, 14, 2023
8GZI
DownloadVisualize
BU of 8gzi by Molmil
Crystal Structure of ApiI in complex with SAH
分子名称: 1,2-ETHANEDIOL, ApiI, GLYCEROL, ...
著者Zhou, J.H, Lu, J.Y.
登録日2022-09-27
公開日2023-09-27
実験手法X-RAY DIFFRACTION (2.12209678 Å)
主引用文献Crystal Structure of ApiI in complex with SAH
To Be Published
8GZ6
DownloadVisualize
BU of 8gz6 by Molmil
Crystal structure of neutralizing VHH P17 in complex with SARS-CoV-2 Alpha variant spike receptor-binding domain
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Nanobody P17
著者Yamaguchi, K, Anzai, I, Maeda, R, Moriguchi, M, Watanabe, T, Imura, A, Takaori-Kondo, A, Inoue, T.
登録日2022-09-25
公開日2022-12-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Structural insights into the rational design of a nanobody that binds with high affinity to the SARS-CoV-2 spike variant.
J.Biochem., 173, 2023
8GZ5
DownloadVisualize
BU of 8gz5 by Molmil
Crystal structure of neutralizing VHH P17 in complex with SARS-CoV-2 Alpha variant spike receptor-binding domain
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Nanobody P17, ...
著者Yamaguchi, K, Anzai, I, Maeda, R, Moriguchi, M, Watanabe, T, Imura, A, Takaori-Kondo, A, Inoue, T.
登録日2022-09-25
公開日2022-12-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural insights into the rational design of a nanobody that binds with high affinity to the SARS-CoV-2 spike variant.
J.Biochem., 173, 2023
8GZ0
DownloadVisualize
BU of 8gz0 by Molmil
Structure of hypothetical protein TTHA1873 with phosphate from Thermus thermophilus
分子名称: CALCIUM ION, PHOSPHATE ION, hypothetical protein TTHA1873
著者Yuvaraj, I, Sekar, K.
登録日2022-09-24
公開日2022-11-09
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Functional characterization of a hypothetical protein (TTHA1873) from Thermus thermophilus.
Proteins, 2023
8GYT
DownloadVisualize
BU of 8gyt by Molmil
Cryo-EM structure of human Pannexin-3 R36S/F40R variant in pre-open state.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Pannexin-3
著者Cong, Y, Jin, X, Kong, F, Wu, T, Yan, C.
登録日2022-09-23
公開日2024-04-17
実験手法ELECTRON MICROSCOPY (3.68 Å)
主引用文献Inner channel lipids regulated gating mechanism of human pannexins.
To Be Published
8GYR
DownloadVisualize
BU of 8gyr by Molmil
Crystal structure of a variable region segment of Leptospira host-interacting outer surface protein, LigA
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
著者Kumar, P, Akif, M.
登録日2022-09-23
公開日2023-06-28
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Crystal structure of a variable region segment of Leptospira host-interacting outer surface protein, LigA, reveals the orientation of Ig-like domains.
Int.J.Biol.Macromol., 244, 2023
8GYQ
DownloadVisualize
BU of 8gyq by Molmil
Cryo-EM structure of human Pannexin-2 in pre-open state.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Pannexin-2
著者Cong, Y, Jin, X, Kong, F, Yan, C.
登録日2022-09-23
公開日2024-04-17
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Inner channel lipids regulated gating mechanism of human pannexins.
To Be Published
8GYP
DownloadVisualize
BU of 8gyp by Molmil
Cryo-EM structure of human Pannexin-3 in closed state.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Pannexin-3
著者Cong, Y, Jin, X, Kong, F, Yan, C.
登録日2022-09-23
公開日2024-04-17
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Inner channel lipids regulated gating mechanism of human pannexins.
To Be Published
8GYO
DownloadVisualize
BU of 8gyo by Molmil
Inner channel lipids regulated gating mechanism of human pannexins.
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, Digitonin, ...
著者Cong, Y, Jin, X, Kong, F, Yan, C.
登録日2022-09-23
公開日2024-04-17
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Inner channel lipids regulated gating mechanism of human pannexins.
To Be Published
8GYN
DownloadVisualize
BU of 8gyn by Molmil
zebrafish TIPE1 strucutre in complex with PE
分子名称: Tumor necrosis factor alpha-induced protein 8-like protein 1, [(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate
著者Wang, W, Cao, S.J.
登録日2022-09-23
公開日2023-04-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Structural insight into TIPE1 functioning as a lipid transfer protein.
J.Biomol.Struct.Dyn., 41, 2023
8GYM
DownloadVisualize
BU of 8gym by Molmil
Cryo-EM structure of Tetrahymena thermophila respiratory mega-complex MC IV2+(I+III2+II)2
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DILAUROYL-SN-GLYCERO-3-PHOSPHATE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, ...
著者Wu, M.C, Hu, Y.Q, Han, F.Z, Zhou, L.
登録日2022-09-23
公開日2023-06-14
実験手法ELECTRON MICROSCOPY (2.96 Å)
主引用文献Structures of Tetrahymena thermophila respiratory megacomplexes on the tubular mitochondrial cristae.
Nat Commun, 14, 2023
8GYJ
DownloadVisualize
BU of 8gyj by Molmil
Crystal structure of Fic25 complexed with PLP-(5S,6S)-N2-acetyl-DADH adduct from Streptomyces ficellus
分子名称: (2~{S},5~{S},6~{S})-2-acetamido-6-[[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylamino]-5,7-bis(oxidanyl)heptanoic acid, DegT/DnrJ/EryC1/StrS family aminotransferase, GLYCEROL, ...
著者Kurosawa, S, Yoshida, A, Tomita, T, Nishiyama, M.
登録日2022-09-22
公開日2023-02-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Mechanisms of Sugar Aminotransferase-like Enzymes to Synthesize Stereoisomers of Non-proteinogenic Amino Acids in Natural Product Biosynthesis.
Acs Chem.Biol., 18, 2023
8GYI
DownloadVisualize
BU of 8gyi by Molmil
Crystal structure of Fic25 (holo form) from Streptomyces ficellus
分子名称: DegT/DnrJ/EryC1/StrS family aminotransferase, GLYCEROL, IMIDAZOLE, ...
著者Kurosawa, S, Yoshida, A, Tomita, T, Nishiyama, M.
登録日2022-09-22
公開日2023-02-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Mechanisms of Sugar Aminotransferase-like Enzymes to Synthesize Stereoisomers of Non-proteinogenic Amino Acids in Natural Product Biosynthesis.
Acs Chem.Biol., 18, 2023
8GYH
DownloadVisualize
BU of 8gyh by Molmil
Crystal structure of Fic25 (apo form) from Streptomyces ficellus
分子名称: DegT/DnrJ/EryC1/StrS family aminotransferase, GLYCEROL, IMIDAZOLE
著者Kurosawa, S, Yoshida, A, Tomita, T, Nishiyama, M.
登録日2022-09-22
公開日2023-02-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Mechanisms of Sugar Aminotransferase-like Enzymes to Synthesize Stereoisomers of Non-proteinogenic Amino Acids in Natural Product Biosynthesis.
Acs Chem.Biol., 18, 2023
8GYE
DownloadVisualize
BU of 8gye by Molmil
Crystal Structure of the 4-1BB in complex with ZG033 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Tumor necrosis factor receptor superfamily member 9, ...
著者Zhu, M, Cheng, L.S, Gao, Y.
登録日2022-09-22
公開日2023-09-27
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of the 4-1BB in complex with ZG033 Fab
To Be Published
8GYD
DownloadVisualize
BU of 8gyd by Molmil
Structure of Schistosoma japonicum Glutathione S-transferase bound with the ligand complex of 16
分子名称: (2R)-2-[[2-(5-chloranylthiophen-2-yl)-4-oxidanylidene-6-[2-(1H-1,2,3,4-tetrazol-5-yl)phenyl]quinazolin-3-yl]methyl]-3-(4-chlorophenyl)propanoic acid, ETHANOL, Glutathione S-transferase class-mu 26 kDa isozyme
著者Wen, X, Jin, R, Hu, H, Zhu, J, Song, W, Lu, X.
登録日2022-09-22
公開日2023-08-23
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Discovery, SAR Study of GST Inhibitors from a Novel Quinazolin-4(1 H )-one Focused DNA-Encoded Library.
J.Med.Chem., 66, 2023
8GY3
DownloadVisualize
BU of 8gy3 by Molmil
Cryo-EM Structure of Membrane-Bound Aldehyde Dehydrogenase from Gluconobacter oxydans
分子名称: (MOLYBDOPTERIN-CYTOSINE DINUCLEOTIDE-S,S)-DIOXO-AQUA-MOLYBDENUM(V), Cytochrome c subunit of aldehyde dehydrogenase, FE2/S2 (INORGANIC) CLUSTER, ...
著者Adachi, T, Miyata, T, Makino, F, Tanaka, H, Namba, K, Sowa, K, Kitazumi, Y, Shirai, O.
登録日2022-09-21
公開日2023-08-02
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Experimental and Theoretical Insights into Bienzymatic Cascade for Mediatorless Bioelectrochemical Ethanol Oxidation with Alcohol and Aldehyde Dehydrogenases
Acs Catalysis, 13, 2023
8GY2
DownloadVisualize
BU of 8gy2 by Molmil
Cryo-EM Structure of Membrane-Bound Alcohol Dehydrogenase from Gluconobacter oxydans
分子名称: Alcohol dehydrogenase (quinone), cytochrome c subunit, dehydrogenase subunit, ...
著者Adachi, T, Miyata, T, Makino, F, Tanaka, H, Namba, K, Sowa, K, Kitazumi, Y, Shirai, O.
登録日2022-09-21
公開日2023-08-02
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Experimental and Theoretical Insights into Bienzymatic Cascade for Mediatorless Bioelectrochemical Ethanol Oxidation with Alcohol and Aldehyde Dehydrogenases
Acs Catalysis, 13, 2023

223532

件を2024-08-07に公開中

PDB statisticsPDBj update infoContact PDBjnumon