Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8YB5
DownloadVisualize
BU of 8yb5 by Molmil
SARS-CoV-2 DMV nsp3-4 pore complex (consensus-pore, C6 symmetry)
分子名称: Non-structural protein 4, Papain-like protease nsp3
著者Huang, Y.X, Zhong, L.J, Zhang, W.X, Ni, T.
登録日2024-02-11
公開日2024-06-19
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Molecular Architecture of Coronavirus Double Membrane Vesicle Pore Complex
To Be Published
8YRH
DownloadVisualize
BU of 8yrh by Molmil
Complex of SARS-CoV-2 main protease and Rosmarinic acid
分子名称: (2R)-3-(3,4-dihydroxyphenyl)-2-{[(2E)-3-(3,4-dihydroxyphenyl)prop-2-enoyl]oxy}propanoic acid, 3C-like proteinase nsp5
著者Wang, Q.S, Li, Q.H.
登録日2024-03-21
公開日2024-07-03
実験手法X-RAY DIFFRACTION (1.841 Å)
主引用文献Structural basis of rosmarinic acid inhibitory mechanism on SARS-CoV-2 main protease.
Biochem.Biophys.Res.Commun., 724, 2024
9BRQ
DownloadVisualize
BU of 9brq by Molmil
Intact V-ATPase State 3 and synaptophysin complex in mouse brain isolated synaptic vesicles
分子名称: Renin receptor cytoplasmic fragment, Ribonuclease kappa, Synaptophysin, ...
著者Wang, C, Jiang, W, Yang, K, Wang, X, Guo, Q, Brunger, A.T.
登録日2024-05-11
公開日2024-06-19
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Structure and topography of the synaptic V-ATPase-synaptophysin complex.
Nature, 2024
8YIF
DownloadVisualize
BU of 8yif by Molmil
Crystal structure of GH13_30 alpha-glucosidase CmmB in complex with acarviosin
分子名称: Acarviosin, Alpha-glucosidase
著者Saburi, W, Tagami, T, Yu, J, Ose, T, Yao, M, Mori, H.
登録日2024-02-29
公開日2024-07-03
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Molecular mechanism for the substrate specificity of Arthrobacter globiformis M6 alpha-glucosidase CmmB, belonging to glycoside hydrolase family 13 subfamily 30
Food Biosci, 61, 2024
8ZB8
DownloadVisualize
BU of 8zb8 by Molmil
Crystal structure of T2R-TTL-DPP21 complex
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, Detyrosinated tubulin alpha-1B chain, ...
著者Wu, C.Y, Chen, J.J.
登録日2024-04-26
公開日2024-06-26
実験手法X-RAY DIFFRACTION (2.94 Å)
主引用文献Crystal structure of T2R-TTL-DPP21 complex
To Be Published
9EX2
DownloadVisualize
BU of 9ex2 by Molmil
X-ray structure of a polyoxidovanadate/lysozyme adduct obtained when the protein is treated with [VIVO(acac)2] in 1.1 M NaCl, 0.1 M sodium acetate at pH 4.0 (Structure C)
分子名称: CHLORIDE ION, Lysozyme C, Polyoxidovanadate complex, ...
著者Tito, G, Merlino, A, Ferraro, G.
登録日2024-04-05
公開日2024-06-26
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (1.172 Å)
主引用文献Non-Covalent and Covalent Binding of New Mixed-Valence Cage-like Polyoxidovanadate Clusters to Lysozyme.
Angew.Chem.Int.Ed.Engl., 2024
8Z50
DownloadVisualize
BU of 8z50 by Molmil
Crystal structure of the ASF1-H3T-H4 complex
分子名称: Histone H3.1t, Histone H4, Histone chaperone ASF1A
著者Xu, L.
登録日2024-04-18
公開日2024-07-03
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural insights into instability of the nucleosome driven by histone variant H3T.
Biochem.Biophys.Res.Commun., 727, 2024
7M1X
DownloadVisualize
BU of 7m1x by Molmil
Cryo-EM Structure of Nucleosome containing mouse histone variant H2A.Z
分子名称: DNA (136-MER), Histone H2A.Z, Histone H2B 1.1, ...
著者Tan, D, Lewis, T.
登録日2021-03-15
公開日2021-09-29
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural basis of chromatin regulation by histone variant H2A.Z.
Nucleic Acids Res., 49, 2021
2FS7
DownloadVisualize
BU of 2fs7 by Molmil
Crystal Structure of Apo-Cellular Retinoic Acid Binding Protein Type II At 1.55 Angstroms Resolution
分子名称: ACETATE ION, CHLORIDE ION, Cellular retinoic acid-binding protein 2
著者Vaezeslami, S, Geiger, J.H.
登録日2006-01-21
公開日2006-09-19
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献The structure of Apo-wild-type cellular retinoic acid binding protein II at 1.4 A and its relationship to ligand binding and nuclear translocation.
J.Mol.Biol., 363, 2006
9FEB
DownloadVisualize
BU of 9feb by Molmil
Short-chain dehydrogenase/reductase (SDR) from Thermus caliditerrae in complex with NADP
分子名称: MAGNESIUM ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SDR family oxidoreductase
著者Kapur, B, Nar, H.
登録日2024-05-17
公開日2024-06-26
実験手法X-RAY DIFFRACTION (1.698 Å)
主引用文献In silico enzyme screening identifies an SDR ketoreductase from Thermus caliditerrae as an attractive biocatalyst and promising candidate for protein engineering
Front Chem Biol, 2024
8ZX6
DownloadVisualize
BU of 8zx6 by Molmil
Heparin bound Tau fibril PHF
分子名称: Isoform Tau-F of Microtubule-associated protein tau
著者Tao, Y.Q, Liu, C, Li, D.
登録日2024-06-13
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Heparin bound Tau fibril PHF
To Be Published
9BRC
DownloadVisualize
BU of 9brc by Molmil
Synaptic Vesicle V-ATPase with synaptophysin and SidK, State 2
分子名称: ATPase H+-transporting V1 subunit D, ATPase, H+ transporting, ...
著者Coupland, C.E, Rubinstein, J.L.
登録日2024-05-11
公開日2024-06-26
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献High-resolution electron cryomicroscopy of V-ATPase in native synaptic vesicles.
Science, 2024
8Y83
DownloadVisualize
BU of 8y83 by Molmil
Crystal structure of a ketoreductase from Sphingobacterium siyangense SY1 with co-enzyme
分子名称: NAD(P)-dependent dehydrogenase (Short-subunit alcohol dehydrogenase family), NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Zheng, Z.R, Wei, H.L, Liu, W.D, You, S.
登録日2024-02-05
公開日2024-06-12
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of a ketoreductase from Sphingobacterium siyangense SY1 with co-enzyme
To Be Published
8ZNG
DownloadVisualize
BU of 8zng by Molmil
Cryo-EM structure of W89F mutated Glutamate dehydrogenase from Thermococcus profundus in complex with NADPH and AKG in the steady stage of reaction
分子名称: 2-OXOGLUTARIC ACID, Glutamate dehydrogenase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Wakabayashi, T, Nakasako, M.
登録日2024-05-26
公開日2024-06-12
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Mechanism for drastic reduction in catalytic activity of Trp89Phe-mutated glutamate dehydrogenase revealed by crystal structure and cryoEM-sampling of metastable conformation in action
To Be Published
9F9L
DownloadVisualize
BU of 9f9l by Molmil
Crystal structure of MUS81-EME1 bound by compound 16.
分子名称: 2-[2-[4-(cyanomethyl)phenyl]phenyl]-5-oxidanyl-6-oxidanylidene-1H-pyrimidine-4-carboxylic acid, Crossover junction endonuclease EME1, Crossover junction endonuclease MUS81, ...
著者Collie, G.W.
登録日2024-05-07
公開日2024-07-03
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Fragment-Based Discovery of Novel MUS81 Inhibitors
Acs Med.Chem.Lett., 2024
8ZOZ
DownloadVisualize
BU of 8zoz by Molmil
Crystal structure of the complex of glyceraldehyde-3-phosphate dehydrogenase of type B from Acinetobacter baumannii with Adenosine monophosphate at 3.20 A resolution.
分子名称: ADENOSINE MONOPHOSPHATE, Glyceraldehyde-3-phosphate dehydrogenase, SULFATE ION
著者Pahuja, P, Viswanathan, V, Kumari, A, Singh, A, Kumar, A, Sharma, P, Chopra, S, Sharma, S, Raje, C.I, Singh, T.P.
登録日2024-05-29
公開日2024-06-12
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal structure of the complex of glyceraldehyde-3-phosphate dehydrogenase of type B from Acinetobacter baumannii with Adenosine monophosphate at 3.20 A resolution.
To Be Published
9FP6
DownloadVisualize
BU of 9fp6 by Molmil
Structure of the NbNRC2 hexameric resistosome
分子名称: ADENOSINE-5'-TRIPHOSPHATE, NRC2a
著者Webster, M.W, Madhuprakash, J, Kamoun, S.
登録日2024-06-13
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Cryo-EM structure of the NbNRC2 hexameric resistosome
To Be Published
9BBH
DownloadVisualize
BU of 9bbh by Molmil
Co-crystal structure of human DDB1 bound to fragment UB028670
分子名称: 1,2-ETHANEDIOL, 4-methoxy-1H-indole, DNA damage-binding protein 1, ...
著者Zeng, H, Dong, A, Frommlet, A, Seitova, A, Loppnau, P, Ackloo, S, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
登録日2024-04-05
公開日2024-06-12
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Co-crystal structure of human DDB1 bound to fragment UB028670
To be published
9BZQ
DownloadVisualize
BU of 9bzq by Molmil
Structure of Class A Beta-lactamase from Bordetella bronchiseptica RB50 in a complex with Avibactam
分子名称: (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide, 1,2-ETHANEDIOL, FORMIC ACID, ...
著者Maltseva, N, Kim, Y, Endres, M, Joachimiak, A, Center for Structural Biology of Infectious Diseases (CSBID)
登録日2024-05-24
公開日2024-06-12
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Structure of Class A Beta-lactamase from Bordetella bronchiseptica RB50 in a complex with Avibactam
To Be Published
9EUA
DownloadVisualize
BU of 9eua by Molmil
The FK1 domain of FKBP51 in complex with SAFit-analog 23d
分子名称: (1-propylpyrazol-4-yl)methyl (2S)-1-[(2S)-2-cyclohexyl-2-(3,4,5-trimethoxyphenyl)ethanoyl]piperidine-2-carboxylate, Peptidyl-prolyl cis-trans isomerase FKBP5
著者Meyners, C, Buffa, V, Hausch, F.
登録日2024-03-27
公開日2024-06-12
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献1,4-Pyrazolyl-containing SAFit-analogues are selective FKBP51 inhibitors with improved ligand efficiency and drug-like profile.
Chemmedchem, 2024
2FT1
DownloadVisualize
BU of 2ft1 by Molmil
Bacteriophage HK97 Head II
分子名称: major capsid protein
著者Gan, L, Speir, J.A, Conway, J.F, Lander, G, Cheng, N, Firek, B.A, Hendrix, R.W, Duda, R.L, Liljas, L, Johnson, J.E.
登録日2006-01-23
公開日2006-02-07
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.9 Å)
主引用文献Capsid Conformational Sampling in HK97 Maturation Visualized by X-Ray Crystallography and Cryo-EM.
Structure, 14, 2006
9EU9
DownloadVisualize
BU of 9eu9 by Molmil
The FK1 domain of FKBP51 in complex with SAFit-analog 15i
分子名称: (4-chloranyl-1,3-thiazol-5-yl)methyl (2S)-1-[(2S)-2-cyclohexyl-2-(3,4,5-trimethoxyphenyl)ethanoyl]piperidine-2-carboxylate, Peptidyl-prolyl cis-trans isomerase FKBP5
著者Meyners, C, Buffa, V, Hausch, F.
登録日2024-03-27
公開日2024-06-12
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献1,4-Pyrazolyl-containing SAFit-analogues are selective FKBP51 inhibitors with improved ligand efficiency and drug-like profile.
Chemmedchem, 2024
9FGP
DownloadVisualize
BU of 9fgp by Molmil
cilia and flagella associated protein 299
分子名称: Cilia- and flagella-associated protein 299, ZINC ION
著者Wright, N.D, Koekemoer, L, Structural Genomics Consortium (SGC)
登録日2024-05-24
公開日2024-06-12
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献cilia and flagella associated protein 299
To Be Published
9BG1
DownloadVisualize
BU of 9bg1 by Molmil
Tri-complex of Compound-3, KRAS G12V, and CypA
分子名称: (2R)-N-[(1P,7S,9S,13R,20M)-21-ethyl-20-{2-[(1S)-1-methoxyethyl]pyridin-3-yl}-17,17-dimethyl-8,14-dioxo-15-oxa-4-thia-9,21,27,28-tetraazapentacyclo[17.5.2.1~2,5~.1~9,13~.0~22,26~]octacosa-1(24),2,5(28),19,22,25-hexaen-7-yl]-3-methyl-2-(N-methylacetamido)butanamide (non-preferred name), GTPase KRas, MAGNESIUM ION, ...
著者Tomlinson, A.C.A, Saldajeno-Concar, M, Knox, J.E, Yano, J.K.
登録日2024-04-18
公開日2024-06-12
最終更新日2024-06-26
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Tri-complex of Compound-3, KRAS G12V, and CypA
To be published
9EUE
DownloadVisualize
BU of 9eue by Molmil
The FK1 domain of FKBP51 in complex with SAFit-analog 23a
分子名称: (1-methylpyrazol-4-yl)methyl (2S)-1-[(2S)-2-cyclohexyl-2-(3,4,5-trimethoxyphenyl)ethanoyl]piperidine-2-carboxylate, Peptidyl-prolyl cis-trans isomerase FKBP5
著者Meyners, C, Buffa, V, Hausch, F.
登録日2024-03-27
公開日2024-06-12
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献1,4-Pyrazolyl-containing SAFit-analogues are selective FKBP51 inhibitors with improved ligand efficiency and drug-like profile.
Chemmedchem, 2024

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon