PDB: 186017 件ウェブページステータス検索Chemie searchBIRD

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3QMS	Crystal structure of the mutant T159V,V182A,Y206F of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with the inhibitor BMP 分子名称: 6-HYDROXYURIDINE-5'-PHOSPHATE, GLYCEROL, Orotidine 5'-phosphate decarboxylase 著者 Fedorov, A.A, Fedorov, E.V, Desai, B, Gerlt, J.A, Almo, S.C. 登録日 2011-02-05 公開日 2012-02-08 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.32 Å) 主引用文献 Conformational changes in orotidine 5'-monophosphate decarboxylase: a structure-based explanation for how the 5'-phosphate group activates the enzyme. Biochemistry, 51, 2012
3WNT	Multiple binding modes of benzyl isothiocyanate inhibitor complexed with Macrophage Migration Inhibitory Factor 分子名称: ISOPROPYL ALCOHOL, Macrophage migration inhibitory factor, N-benzylthioformamide, ... 著者 Spencer, E.S, Dale, E.J, Gommans, A.L, Rutledge, M.T, Gamble, A.B, Smith, R.A.J, Wilbanks, S.M, Hampton, M.B, Tyndall, J.D.A. 登録日 2013-12-16 公開日 2014-03-05 最終更新日 2015-04-01 実験手法 X-RAY DIFFRACTION (2.074 Å) 主引用文献 Multiple binding modes of isothiocyanates that inhibit macrophage migration inhibitory factor Eur.J.Med.Chem., 93, 2015
1EVS	CRYSTAL STRUCTURE OF HUMAN ONCOSTATIN M 分子名称: ONCOSTATIN M 著者 Deller, M.C, Hudson, K.R, Ikemizu, S, Bravo, J, Jones, E.Y, Heath, J.K. 登録日 2000-04-20 公開日 2000-09-13 最終更新日 2018-01-31 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal structure and functional dissection of the cytostatic cytokine oncostatin M. Structure Fold.Des., 8, 2000
3WNS	Allyl isothiocyanate inhibitor complexed with Macrophage Migration Inhibitory Factor 分子名称: CHLORIDE ION, GLYCEROL, ISOPROPYL ALCOHOL, ... 著者 Spencer, E.S, Dale, E.J, Gommans, A.L, Rutledge, M.T, Gamble, A.B, Smith, R.A.J, Wilbanks, S.M, Hampton, M.B, Tyndall, J.D.A. 登録日 2013-12-16 公開日 2014-03-05 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.658 Å) 主引用文献 Multiple binding modes of isothiocyanates that inhibit macrophage migration inhibitory factor Eur.J.Med.Chem., 93, 2015
3GVK	Crystal structure of endo-neuraminidase NF mutant 分子名称: Endo-N-acetylneuraminidase, N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-beta-neuraminic acid, N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-beta-neuraminic acid, ... 著者 Schulz, E.C, Dickmanns, A, Ficner, R. 登録日 2009-03-31 公開日 2010-03-02 最終更新日 2021-10-13 実験手法 X-RAY DIFFRACTION (1.84 Å) 主引用文献 Structural basis for the recognition and cleavage of polysialic acid by the bacteriophage K1F tailspike protein EndoNF. J.Mol.Biol., 397, 2010
3HCR	Human Ferrochelatase with deuteroporphyrin and Ni Bound 分子名称: CHLORIDE ION, CHOLIC ACID, FE(III) DEUTEROPORPHYRIN IX, ... 著者 Medlock, A.E, Dailey, H.A, Lanzilotta, W.N. 登録日 2009-05-06 公開日 2009-11-10 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Product release rather than chelation determines metal specificity for ferrochelatase. J.Mol.Biol., 393, 2009
1Z34	Crystal structure of Trichomonas vaginalis purine nucleoside phosphorylase complexed with 2-fluoro-2'-deoxyadenosine 分子名称: 5-(6-AMINO-2-FLUORO-PURIN-9-YL)-2-HYDROXYMETHYL-TETRAHYDRO-FURAN-3-OL, purine nucleoside phosphorylase 著者 Zhang, Y, Wang, W.H, Wu, S.W, Wang, C.C, Ealick, S.E. 登録日 2005-03-10 公開日 2005-03-29 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Identification of a subversive substrate of Trichomonas vaginalis purine nucleoside phosphorylase and the crystal structure of the enzyme-substrate complex. J.Biol.Chem., 280, 2005
3ET4	Structure of Recombinant Haemophilus Influenzae E(P4) Acid Phosphatase 分子名称: MAGNESIUM ION, Outer membrane protein P4, NADP phosphatase, ... 著者 Tanner, J.J. 登録日 2008-10-06 公開日 2008-10-14 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structure of Recombinant Haemophilus Influenzae E (P4) Acid Phosphatase Reveals a New Member of the Haloacid Dehalogenase Superfamily. Biochemistry, 46, 2007
1Z14	Structural Determinants of Tissue Tropism and In Vivo Pathogenicity for the Parvovirus Minute Virus of Mice 分子名称: VP2 著者 Kontou, M, Govindasamy, L, Nam, H.J, Bryant, N, Llamas-Saiz, A.L, Foces-Foces, C, Hernando, E, Rubio, M.P, McKenna, R, Almendral, J.M, Agbandje-McKenna, M. 登録日 2005-03-03 公開日 2005-09-06 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (3.25 Å) 主引用文献 Structural determinants of tissue tropism and in vivo pathogenicity for the parvovirus minute virus of mice. J.Virol., 79, 2005
4JS5	Crystal structure of E. coli Exonuclease I in complex with a dT13 oligonucleotide 分子名称: Exodeoxyribonuclease I, SULFATE ION, dT13 oligonucleotide 著者 Bell, C.E. 登録日 2013-03-22 公開日 2013-05-08 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Crystal structures of Escherichia coli exonuclease I in complex with single-stranded DNA provide insights into the mechanism of processive digestion. Nucleic Acids Res., 41, 2013
3EXY	Crystal structure of the 2[4Fe-4S] ferredoxin V13G variant from allochromatium vinosum 分子名称: Ferredoxin, IRON/SULFUR CLUSTER 著者 Giastas, P, Saridakis, E, Mavridis, I.M. 登録日 2008-10-17 公開日 2009-05-05 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.48 Å) 主引用文献 Insight into the protein and solvent contributions to the reduction potentials of [4Fe-4S]2+/+ clusters: crystal structures of the Allochromatium vinosum ferredoxin variants C57A and V13G and the homologous Escherichia coli ferredoxin. J.Biol.Inorg.Chem., 14, 2009
1X9K	An all-RNA Hairpin Ribozyme with mutation U39C 分子名称: 5'-R(*AP*AP*UP*AP*GP*AP*GP*AP*AP*GP*CP*GP*A)-3', 5'-R(*GP*GP*CP*AP*GP*AP*GP*AP*AP*AP*CP*AP*CP*AP*CP*GP*A)-3', 5'-R(*UP*CP*GP*CP*AP*GP*UP*CP*CP*UP*AP*UP*U)-3', ... 著者 Alam, S, Grum-Tokars, V, Krucinska, J, Kundracik, M.L, Wedekind, J.E. 登録日 2004-08-21 公開日 2005-11-22 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (3.17 Å) 主引用文献 Conformational Heterogeneity at Position U37 of an All-RNA Hairpin Ribozyme with Implications for Metal Binding and the Catalytic Structure of the S-Turn. Biochemistry, 44, 2005
3HCN	Hg and protoporphyrin bound Human Ferrochelatase 分子名称: BICARBONATE ION, CHOLIC ACID, FE2/S2 (INORGANIC) CLUSTER, ... 著者 Medlock, A.E, Dailey, H.A, Lanzilotta, W.N. 登録日 2009-05-06 公開日 2009-11-10 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Product release rather than chelation determines metal specificity for ferrochelatase. J.Mol.Biol., 393, 2009
3D75	Crystal structure of a pheromone binding protein mutant D35N, from Apis mellifera, at pH 5.5 分子名称: N-BUTYL-BENZENESULFONAMIDE, Pheromone-binding protein ASP1 著者 Pesenti, M.E, Spinelli, S, Bezirard, V, Briand, L, Pernollet, J.C, Tegoni, M, Cambillau, C. 登録日 2008-05-20 公開日 2009-05-26 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Queen bee pheromone binding protein pH-induced domain swapping favors pheromone release J.Mol.Biol., 390, 2009
3HCP	Human ferrochelatase with Mn and deuteroporphyrin bound 分子名称: CHOLIC ACID, FE(III) DEUTEROPORPHYRIN IX, FE2/S2 (INORGANIC) CLUSTER, ... 著者 Medlock, A.E, Dailey, H.A, Lanzilotta, W.N. 登録日 2009-05-06 公開日 2009-11-10 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Product release rather than chelation determines metal specificity for ferrochelatase. J.Mol.Biol., 393, 2009
1RA0	Bacterial cytosine deaminase D314G mutant bound to 5-fluoro-4-(S)-hydroxy-3,4-dihydropyrimidine. 分子名称: (4S)-5-FLUORO-4-HYDROXY-3,4-DIHYDROPYRIMIDIN-2(1H)-ONE, Cytosine deaminase, FE (III) ION 著者 Mahan, S.D, Ireton, G.C, Stoddard, B.L, Black, M.E. 登録日 2003-10-31 公開日 2004-10-05 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.12 Å) 主引用文献 Random mutagenesis and selection of Escherichia coli cytosine deaminase for cancer gene therapy. Protein Eng.Des.Sel., 17, 2004
2AMM	Crystal structure of L122V/L132V mutant of nitrophorin 2 分子名称: Nitrophorin 2, PROTOPORPHYRIN IX CONTAINING FE 著者 Weichsel, A, Berry, R.E, Walker, F.A, Montfort, W.R. 登録日 2005-08-09 公開日 2006-07-18 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structures, ligand induced conformational change and heme deformation in complexes of nitrophorin 2, a nitric oxide transport protein from rhodnius prolixus To be Published
3HFN	Crystal Structure of an Hfq protein from Anabaena sp. 分子名称: Asl2047 protein 著者 Boggild, A, Overgaard, M, Valentin-Hansen, P, Brodersen, D.E. 登録日 2009-05-12 公開日 2009-07-14 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.31 Å) 主引用文献 Cyanobacteria contain a structural homologue of the Hfq protein with altered RNA-binding properties. Febs J., 276, 2009
2ALL	Crystal structure of L122V/L132V mutant of nitrophorin 2 分子名称: Nitrophorin 2, PROTOPORPHYRIN IX CONTAINING FE 著者 Weichsel, A, Berry, R.E, Walker, F.A, Montfort, W.R. 登録日 2005-08-05 公開日 2006-07-18 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (1.47 Å) 主引用文献 Crystal structures, ligand induced conformational change and heme deformation in complexes of nitrophorin 2, a nitric oxide transport protein from rhodnius prolixus To be Published
2AJI	Crystal structure of the editing domain of E. coli leucyl-tRNA synthetase complexes with isoleucine 分子名称: ISOLEUCINE, Leucyl-tRNA synthetase 著者 Liu, Y, Liao, J, Zhu, B, Wang, E.D, Ding, J. 登録日 2005-08-02 公開日 2006-01-24 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Crystal structures of the editing domain of Escherichia coli leucyl-tRNA synthetase and its complexes with Met and Ile reveal a lock-and-key mechanism for amino acid discrimination Biochem.J., 394, 2006
3SJ3	Crystal structure of the mutant R160A.Y206F of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with the inhibitor BMP 分子名称: 6-HYDROXYURIDINE-5'-PHOSPHATE, Orotidine 5'-phosphate decarboxylase 著者 Fedorov, A.A, Fedorov, E.V, Desai, B, Gerlt, J.A, Almo, S.C. 登録日 2011-06-20 公開日 2011-06-29 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.26 Å) 主引用文献 Conformational changes in orotidine 5'-monophosphate decarboxylase: a structure-based explanation for how the 5'-phosphate group activates the enzyme. Biochemistry, 51, 2012
2AWM	GFP R96A chromophore maturation recovery mutant R96A Q183R 分子名称: MAGNESIUM ION, green fluorescent protein 著者 Wood, T.I, Barondeau, D.P, Hitomi, C, Kassmann, C.J, Tainer, J.A, Getzoff, E.D. 登録日 2005-09-01 公開日 2006-04-18 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Defining the role of arginine 96 in green fluorescent protein fluorophore biosynthesis. Biochemistry, 44, 2005
3ZDV	Crystal structure of the LecB lectin from Pseudomonas aeruginosa in complex with Methyl 6-(2,4,6-trimethylphenylsulfonylamido)-6-deoxy-alpha-D-mannopyranoside 分子名称: 1,2-ETHANEDIOL, 2,4,6-trimethylbenzenesulfonamide, CALCIUM ION, ... 著者 Hauck, D, Joachim, I, Frommeyer, B, Varrot, A, Philipp, B, MOller, H.M, Imberty, A, Exner, T.E, Titz, A. 登録日 2012-11-30 公開日 2013-09-18 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.41 Å) 主引用文献 Discovery of Two Classes of Potent Glycomimetic Inhibitors of Pseudomonas Aeruginosa Lecb with Distinct Binding Modes. Acs Chem.Biol., 8, 2013
4CIU	Crystal structure of E. coli ClpB 分子名称: ADENOSINE-5'-DIPHOSPHATE, CHAPERONE PROTEIN CLPB 著者 Kopp, J, Sinning, I, Bukau, B, Kummer, E, Mogk, A. 登録日 2013-12-16 公開日 2014-05-14 最終更新日 2019-05-22 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Head-to-Tail Interactions of the Coiled-Coil Domains Regulate Clpb Cooperation with Hsp70 in Protein Disaggregation Elife, 3, 2014
2B9R	Crystal Structure of Human Cyclin B1 分子名称: Human cyclin B1 著者 Basavappa, R, Petri, E. 登録日 2005-10-12 公開日 2006-10-17 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 The Crystal Structure of Human Cyclin B. Cell Cycle, 6, 2007

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