PDB: 45522 件ウェブページステータス検索Chemie searchBIRD

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3X0B	Crystal structure of PIP4KIIBETA I368A complex with AMP 分子名称: ADENOSINE MONOPHOSPHATE, Phosphatidylinositol 5-phosphate 4-kinase type-2 beta 著者 Takeuchi, K, Lo, Y.H, Sumita, K, Senda, M, Terakawa, J, Dimitoris, A, Locasale, J.W, Sasaki, M, Yoshino, H, Zhang, Y, Kahoud, E.R, Takano, T, Yokota, T, Emerling, B, Asara, J.A, Ishida, T, Shimada, I, Daikoku, T, Cantley, L.C, Senda, T, Sasaki, A.T. 登録日 2014-10-09 公開日 2015-10-14 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 The Lipid Kinase PI5P4K beta Is an Intracellular GTP Sensor for Metabolism and Tumorigenesis Mol.Cell, 61, 2016
3WZX	S266A mutant 3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1 at 0.1MPa - complex with IPM and Mg 分子名称: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, MAGNESIUM ION 著者 Nagae, T, Watanabe, N. 登録日 2014-10-08 公開日 2015-10-14 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Pressure Adaptation of 3-Isopropylmalate Dehydrogenase from the Extremely Piezophilic Bacterium Shewanella benthica is Attributed to just One Amino Acid Substitution To be Published
3X0C	Crystal structure of PIP4KIIBETA I368A complex with GMP 分子名称: GUANOSINE-5'-MONOPHOSPHATE, Phosphatidylinositol 5-phosphate 4-kinase type-2 beta 著者 Takeuchi, K, Lo, Y.H, Sumita, K, Senda, M, Terakawa, J, Dimitoris, A, Locasale, J.W, Sasaki, M, Yoshino, H, Zhang, Y, Kahoud, E.R, Takano, T, Yokota, T, Emerling, B, Asara, J.A, Ishida, T, Shimada, I, Daikoku, T, Cantley, L.C, Senda, T, Sasaki, A.T. 登録日 2014-10-09 公開日 2015-10-14 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 The Lipid Kinase PI5P4K beta Is an Intracellular GTP Sensor for Metabolism and Tumorigenesis Mol.Cell, 61, 2016
3X1S	Crystal structure of the nucleosome core particle 分子名称: CHLORIDE ION, DNA (146-MER), Histone H2A type 1-B/E, ... 著者 Sivaraman, P, Kumarevel, T.S. 登録日 2014-11-27 公開日 2015-09-23 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.805 Å) 主引用文献 Structural and functional analyses of nucleosome complexes with mouse histone variants TH2a and TH2b, involved in reprogramming Biochem.Biophys.Res.Commun., 464, 2015
3X3U	Crystal structure of wild-type of E. coli CutA1 分子名称: Divalent-cation tolerance protein CutA 著者 Tanaka, T, Matsuura, Y, Yutani, K. 登録日 2015-02-12 公開日 2015-04-15 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.09 Å) 主引用文献 Crystal structure of wild-type of E. coli CutA1 To be Published
3X3Q	Structure of recombinant thaumatin in the presence of 1.0M PST, pH7 at 293K 分子名称: L(+)-TARTARIC ACID, thaumatin I 著者 Masuda, T, Okubo, K, Mikami, B. 登録日 2015-01-26 公開日 2016-02-03 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structure of the recombinant thaumatin in the presence of PST at room temperature To be Published
3NT3	CRYSTAL STRUCTURE OF LSSmKate2 red fluorescent proteins with large Stokes shift 分子名称: GLYCEROL, LSSmKate2 red fluorescent protein 著者 Malashkevich, V.N, Piatkevich, K, Almo, S.C, Verkhusha, V. 登録日 2010-07-02 公開日 2010-08-18 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Engineering ESPT Pathways Based on Structural Analysis of LSSmKate Red Fluorescent Proteins with Large Stokes Shift. J.Am.Chem.Soc., 132, 2010
3O6E	Crystal Structure of human Hiwi1 PAZ domain (residues 277-399) in complex with 14-mer RNA (12-bp + 2-nt overhang) containing 2'-OCH3 at its 3'-end 分子名称: Piwi-like protein 1, RNA (5'-R(*GP*CP*GP*AP*AP*UP*AP*UP*UP*CP*GP*CP*UP*(OMU))-3') 著者 Tian, Y, Simanshu, D.K, Ma, J.-B, Patel, D.J. 登録日 2010-07-28 公開日 2011-01-12 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (2.904 Å) 主引用文献 Inaugural Article: Structural basis for piRNA 2'-O-methylated 3'-end recognition by Piwi PAZ (Piwi/Argonaute/Zwille) domains. Proc.Natl.Acad.Sci.USA, 108, 2011
3NUA	Crystal Structure of Phosphoribosylaminoimidazole-Succinocarboxamide Synthase from Clostridium perfringens 分子名称: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, CITRIC ACID, ... 著者 Kim, Y, Mulligan, R, Kwon, K, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2010-07-06 公開日 2010-08-25 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Crystal Structure of Phosphoribosylaminoimidazole-Succinocarboxamide Synthase from Clostridium perfringens To be Published
3X08	Crystal structure of PIP4KIIBETA N203A complex with GMP 分子名称: GUANOSINE-5'-MONOPHOSPHATE, Phosphatidylinositol 5-phosphate 4-kinase type-2 beta 著者 Takeuchi, K, Lo, Y.H, Sumita, K, Senda, M, Terakawa, J, Dimitoris, A, Locasale, J.W, Sasaki, M, Yoshino, H, Zhang, Y, Kahoud, E.R, Takano, T, Yokota, T, Emerling, B, Asara, J.A, Ishida, T, Shimada, I, Daikoku, T, Cantley, L.C, Senda, T, Sasaki, A.T. 登録日 2014-10-09 公開日 2015-10-14 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 The Lipid Kinase PI5P4K beta Is an Intracellular GTP Sensor for Metabolism and Tumorigenesis Mol.Cell, 61, 2016
3O7V	Crystal Structure of human Hiwi1 (V361M) PAZ domain (residues 277-399) in complex with 14-mer RNA (12-bp + 2-nt overhang) containing 2'-OCH3 at its 3'-end 分子名称: Piwi-like protein 1, RNA (5'-R(*GP*CP*GP*AP*AP*UP*AP*UP*UP*CP*GP*CP*UP*(OMU))-3') 著者 Tian, Y, Simanshu, D.K, Ma, J.-B, Patel, D.J. 登録日 2010-08-01 公開日 2011-01-12 最終更新日 2017-11-08 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Inaugural Article: Structural basis for piRNA 2'-O-methylated 3'-end recognition by Piwi PAZ (Piwi/Argonaute/Zwille) domains. Proc.Natl.Acad.Sci.USA, 108, 2011
3X07	Crystal structure of PIP4KIIBETA N203A complex with AMP 分子名称: ADENOSINE MONOPHOSPHATE, Phosphatidylinositol 5-phosphate 4-kinase type-2 beta 著者 Takeuchi, K, Lo, Y.H, Sumita, K, Senda, M, Terakawa, J, Dimitoris, A, Locasale, J.W, Sasaki, M, Yoshino, H, Zhang, Y, Kahoud, E.R, Takano, T, Yokota, T, Emerling, B, Asara, J.A, Ishida, T, Shimada, I, Daikoku, T, Cantley, L.C, Senda, T, Sasaki, A.T. 登録日 2014-10-09 公開日 2015-10-14 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 The Lipid Kinase PI5P4K beta Is an Intracellular GTP Sensor for Metabolism and Tumorigenesis Mol.Cell, 61, 2016
3WZZ	Crystal structure of PIP4KIIBETA 分子名称: Phosphatidylinositol 5-phosphate 4-kinase type-2 beta 著者 Takeuchi, K, Lo, Y.H, Sumita, K, Senda, M, Terakawa, J, Dimitoris, A, Locasale, J.W, Sasaki, M, Yoshino, H, Zhang, Y, Kahoud, E.R, Takano, T, Yokota, T, Emerling, B, Asara, J.A, Ishida, T, Shimada, I, Daikoku, T, Cantley, L.C, Senda, T, Sasaki, A.T. 登録日 2014-10-08 公開日 2015-10-14 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 The Lipid Kinase PI5P4K beta Is an Intracellular GTP Sensor for Metabolism and Tumorigenesis Mol.Cell, 61, 2016
3MM9	Dissimilatory sulfite reductase nitrite complex 分子名称: IRON/SULFUR CLUSTER, NITRITE ION, SIROHEME, ... 著者 Parey, K, Warkentin, E, Kroneck, P.M.H, Ermler, U. 登録日 2010-04-19 公開日 2010-07-21 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Reaction cycle of the dissimilatory sulfite reductase from Archaeoglobus fulgidus. Biochemistry, 49, 2010
3X0U	Crystal structure of PirB 分子名称: Uncharacterized protein 著者 Wang, H.C, Ko, T.P, Wang, A.H.J, Lo, C.F. 登録日 2014-10-22 公開日 2015-08-26 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 The opportunistic marine pathogen Vibrio parahaemolyticus becomes virulent by acquiring a plasmid that expresses a deadly toxin. Proc.Natl.Acad.Sci.USA, 112, 2015
3MJZ	The crystal structure of native FG41 MSAD 分子名称: FG41 Malonate Semialdehyde Decarboxylase 著者 Guo, Y, Serrano, H, Poelarends, G.J, Johnson, W.H.Jr, Hackert, M.L, Whitman, C.P. 登録日 2010-04-13 公開日 2011-04-27 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Kinetic, Mutational, and Structural Analysis of Malonate Semialdehyde Decarboxylase from Coryneform Bacterium Strain FG41: Mechanistic Implications for the Decarboxylase and Hydratase Activities. Biochemistry, 52, 2013
3ZRC	pVHL54-213-EloB-EloC complex (4R)-4-HYDROXY-1-[(3-METHYLISOXAZOL-5-YL)ACETYL]-N-[4-(1,3-OXAZOL-5-YL)BENZYL]-L-PROLINAMIDE bound 分子名称: (4R)-4-HYDROXY-1-[(3-METHYLISOXAZOL-5-YL)ACETYL]-N-[4-(1,3-OXAZOL-5-YL)BENZYL]-L-PROLINAMIDE, TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1, TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2, ... 著者 Van Molle, I, Buckley, D.L, Crews, C.M, Ciulli, A. 登録日 2011-06-15 公開日 2012-03-07 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Targeting the Von Hippel-Lindau E3 Ubiquitin Ligase Using Small Molecules to Disrupt the Vhl/Hif-1Alpha Interaction J.Am.Chem.Soc., 134, 2012
3ML4	Crystal structure of a complex between Dok7 PH-PTB and the MuSK juxtamembrane region 分子名称: Muscle, skeletal receptor tyrosine-protein kinase, Protein Dok-7 著者 Bergamin, E, Hubbard, S.R. 登録日 2010-04-16 公開日 2010-07-14 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 The Cytoplasmic Adaptor Protein Dok7 Activates the Receptor Tyrosine Kinase MuSK via Dimerization. Mol.Cell, 39, 2010
3MLT	Crystal structure of anti-HIV-1 V3 Fab 2557 in complex with a UG1033 V3 peptide 分子名称: HIV-1 gp120 third variable region (V3) crown, Human monoclonal anti-HIV-1 gp120 V3 antibody 2557 Fab heavy chain, Human monoclonal anti-HIV-1 gp120 V3 antibody 2557 Fab light chain 著者 Kong, X.-P. 登録日 2010-04-18 公開日 2010-07-14 最終更新日 2017-11-08 実験手法 X-RAY DIFFRACTION (2.49 Å) 主引用文献 Conserved structural elements in the V3 crown of HIV-1 gp120. Nat.Struct.Mol.Biol., 17, 2010
3ZM5	CRYSTAL STRUCTURE OF MURF LIGASE IN COMPLEX WITH CYANOTHIOPHENE INHIBITOR 分子名称: 2,4-bis(chloranyl)-N-[3-cyano-6-[(4-hydroxyphenyl)methyl]-5,7-dihydro-4H-thieno[2,3-c]pyridin-2-yl]-5-morpholin-4-ylsulfonyl-benzamide, UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D-ALANINE LIGASE 著者 Hrast, M, Turk, S, Sosic, I, Knez, D, Randall, C.P, Barreteau, H, Contreras-Martel, C, Dessen, A, ONeill, A.J, Mengin-Lecreulx, D, Blanot, D, Gobec, S. 登録日 2013-02-05 公開日 2013-07-03 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.94 Å) 主引用文献 Structure-Activity Relationships of New Cyanothiophene Inhibitors of the Essential Peptidoglycan Biosynthesis Enzyme Murf. Eur.J.Med.Chem., 66C, 2013
3ZOF	Crystal structure of FMN-binding protein (YP_005476) from Thermus thermophilus with bound benzene-1,4-diol 分子名称: FLAVIN MONONUCLEOTIDE, FLAVOREDOXIN, benzene-1,4-diol 著者 Pavkov-Keller, T, Steinkellner, G, Gruber, C.C, Steiner, K, Winkler, C, Schwamberger, O, Schwab, H, Faber, K, Gruber, K. 登録日 2013-02-21 公開日 2014-05-14 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Identification of Promiscuous Ene-Reductase Activity by Mining Structural Databases Using Active Site Constellations. Nat.Commun., 5, 2014
3ZSF	Crystal structure of the L-cystine solute receptor of Neisseria gonorrhoeae in the unliganded open conformation 分子名称: ABC TRANSPORTER, PERIPLASMIC BINDING PROTEIN, AMINO ACID 著者 Bulut, H, Moniot, S, Scheffel, F, Gathmann, S, Licht, A, Saenger, W, Schneider, E. 登録日 2011-06-27 公開日 2011-12-14 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.32 Å) 主引用文献 Crystal Structures of Two Solute Receptors for L-Cystine and L-Cysteine, Respectively, of the Human Pathogen Neisseria Gonorrhoeae. J.Mol.Biol., 415, 2012
3MPJ	Structure of the glutaryl-coenzyme A dehydrogenase 分子名称: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, Glutaryl-CoA dehydrogenase, ... 著者 Wischgoll, S, Warkentin, E, Boll, M, Ermler, U. 登録日 2010-04-27 公開日 2010-08-18 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural basis for promoting and preventing decarboxylation in glutaryl-coenzyme a dehydrogenases. Biochemistry, 49, 2010
3ZQX	Carbohydrate-binding module CBM3b from the cellulosomal cellobiohydrolase 9A from Clostridium thermocellum 分子名称: CALCIUM ION, CELLULOSE 1,4-BETA-CELLOBIOSIDASE 著者 Yaniv, O, Petkun, S, Shimon, L.J.W, Bayer, E.A, Lamed, R, Frolow, F. 登録日 2011-06-12 公開日 2012-04-25 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.04 Å) 主引用文献 A Single Mutation Reforms the Binding Activity of an Adhesion-Deficient Family 3 Carbohydrate-Binding Module Acta Crystallogr.,Sect.D, 68, 2012
3MRU	Crystal Structure of Aminoacylhistidine Dipeptidase from Vibrio alginolyticus 分子名称: Aminoacyl-histidine dipeptidase, ZINC ION 著者 Chang, C.-Y, Hsieh, Y.-C, Wu, T.-K, Chen, C.-J. 登録日 2010-04-29 公開日 2010-09-01 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Crystal structure and mutational analysis of aminoacylhistidine dipeptidase from vibrio alginolyticus reveal a new architecture of M20 metallopeptidases J.Biol.Chem., 285, 2010

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