PDB: 471 件ウェブページステータス検索Chemie searchBIRD

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4V8O	Crystal structure of the hybrid state of ribosome in complex with the guanosine triphosphatase release factor 3 分子名称: 16S RRNA, 23S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ... 著者 Jin, H, Kelley, A.C, Ramakrishnan, V. 登録日 2011-07-26 公開日 2014-07-09 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.8 Å) 主引用文献 Crystal Structure of the Hybrid State of Ribosome in Complex with the Guanosine Triphosphatase Release Factor 3. Proc.Natl.Acad.Sci.USA, 108, 2011
4V8U	Crystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex. 分子名称: 16S RIBOSOMAL RNA, 23S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ... 著者 Gao, Y.G, Feng, S, Chen, Y. 登録日 2012-08-28 公開日 2014-07-09 最終更新日 2019-10-30 実験手法 X-RAY DIFFRACTION (3.7 Å) 主引用文献 Crystal structure of 70S ribosome with both cognate tRNAs in the E and P sites representing an authentic elongation complex. PLoS ONE, 8, 2013
4V9M	70S Ribosome translocation intermediate FA-4.2A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state. 分子名称: 23S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Zhou, J, Lancaster, L, Donohue, J.P, Noller, H.F. 登録日 2013-04-25 公開日 2014-07-09 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (4 Å) 主引用文献 Crystal structures of EF-G-ribosome complexes trapped in intermediate states of translocation. Science, 340, 2013
4W29	70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state. 分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... 著者 Zhou, J, Lancaster, L, Donohue, J.P, Noller, H.F. 登録日 2014-07-02 公開日 2014-10-01 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3.8 Å) 主引用文献 How the ribosome hands the A-site tRNA to the P site during EF-G-catalyzed translocation. Science, 345, 2014
4V5S	The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome. 分子名称: 16S RRNA, 23S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ... 著者 Schmeing, T.M, Voorhees, R.M, Ramakrishnan, V. 登録日 2010-12-07 公開日 2014-07-09 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 How Mutations in tRNA Distant from the Anticodon Affect the Fidelity of Decoding. Nat.Struct.Mol.Biol., 18, 2011
4V9O	Control of ribosomal subunit rotation by elongation factor G 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Pulk, A, Cate, J.H.D. 登録日 2013-05-03 公開日 2014-07-09 最終更新日 2014-12-17 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Control of ribosomal subunit rotation by elongation factor G. Science, 340, 2013
4V6K	Structural insights into cognate vs. near-cognate discrimination during decoding. 分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Agirrezabala, X, Schreiner, E, Trabuco, L.G, Lei, J, Ortiz-Meoz, R.F, Schulten, K, Green, R, Frank, J. 登録日 2011-01-07 公開日 2014-07-09 最終更新日 2024-02-28 実験手法 ELECTRON MICROSCOPY (8.25 Å) 主引用文献 Structural insights into cognate versus near-cognate discrimination during decoding. Embo J., 30, 2011
4V6L	Structural insights into cognate vs. near-cognate discrimination during decoding. 分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Agirrezabala, X, Schreiner, E, Trabuco, L.G, Lei, J, Ortiz-Meoz, R.F, Schulten, K, Green, R, Frank, J. 登録日 2011-01-07 公開日 2014-07-09 最終更新日 2024-02-28 実験手法 ELECTRON MICROSCOPY (13.2 Å) 主引用文献 Structural insights into cognate versus near-cognate discrimination during decoding. Embo J., 30, 2011
4V7B	Visualization of two tRNAs trapped in transit during EF-G-mediated translocation 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Ramrath, D.J.F, Lancaster, L, Sprink, T, Mielke, T, Loerke, J, Noller, H.F, Spahn, C.M.T. 登録日 2013-10-27 公開日 2014-07-09 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (6.8 Å) 主引用文献 Visualization of two transfer RNAs trapped in transit during elongation factor G-mediated translocation. Proc.Natl.Acad.Sci.USA, 110, 2013
4V9P	Control of ribosomal subunit rotation by elongation factor G 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Pulk, A, Cate, J.H.D. 登録日 2013-05-03 公開日 2014-07-09 最終更新日 2014-12-17 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Control of ribosomal subunit rotation by elongation factor G. Science, 340, 2013
4V5F	The structure of the ribosome with elongation factor G trapped in the post-translocational state 分子名称: 16S ribosomal RNA, 23S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ... 著者 Gao, Y.-G, Selmer, M, Dunham, C.M, Weixlbaumer, A, Kelley, A.C, Ramakrishnan, V. 登録日 2009-09-01 公開日 2014-07-09 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 The structure of the ribosome with elongation factor G trapped in the posttranslocational state. Science, 326, 2009
4V6X	Structure of the human 80S ribosome 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ... 著者 Anger, A.M, Armache, J.-P, Berninghausen, O, Habeck, M, Subklewe, M, Wilson, D.N, Beckmann, R. 登録日 2013-02-27 公開日 2014-07-09 最終更新日 2023-02-01 実験手法 ELECTRON MICROSCOPY (5 Å) 主引用文献 Structures of the human and Drosophila 80S ribosome. Nature, 497, 2013
4V9K	70S ribosome translocation intermediate GDPNP-I containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state. 分子名称: 23S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Zhou, J, Lancaster, L, Donohue, J.P, Noller, H.F. 登録日 2013-04-24 公開日 2014-07-09 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Crystal structures of EF-G-ribosome complexes trapped in intermediate states of translocation. Science, 340, 2013
5JUT	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure IV (almost non-rotated 40S subunit) 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 5.8S ribosomal RNA, ... 著者 Abeyrathne, P, Koh, C.S, Grant, T, Grigorieff, N, Korostelev, A.A. 登録日 2016-05-10 公開日 2016-10-05 最終更新日 2019-11-27 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Ensemble cryo-EM uncovers inchworm-like translocation of a viral IRES through the ribosome. Elife, 5, 2016
4V5L	The structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analog 分子名称: 16S RRNA, 23S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ... 著者 Voorhees, R.M, Schmeing, T.M, Ramakrishnan, V. 登録日 2010-09-02 公開日 2014-07-09 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 The Mechanism for Activation of GTP Hydrolysis on the Ribosome. Science, 330, 2010
7OSA	Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands 分子名称: 18S rRNA, 25S rRNA, 40S ribosomal protein S0, ... 著者 Djumagulov, M, Jenner, L, Rozov, A, Demeshkina, N, Yusupov, M, Yusupova, G. 登録日 2021-06-08 公開日 2021-12-08 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Accuracy mechanism of eukaryotic ribosome translocation. Nature, 600, 2021
7OSM	Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands 分子名称: 18S rRNA, 25S rRNA, 40S ribosomal protein S0, ... 著者 Djumagulov, M, Jenner, L, Rozov, A, Demeshkina, N, Yusupov, M, Yusupova, G. 登録日 2021-06-09 公開日 2021-12-08 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Accuracy mechanism of eukaryotic ribosome translocation. Nature, 600, 2021
7OLD	Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state 分子名称: 18S rRNA, 26S rRNA, 40S ribosomal protein S0, ... 著者 Kisonaite, M, Wild, K, Sinning, I. 登録日 2021-05-19 公開日 2022-01-26 最終更新日 2022-02-09 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 High-resolution structures of a thermophilic eukaryotic 80S ribosome reveal atomistic details of translocation. Nat Commun, 13, 2022
5JUO	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure I (fully rotated 40S subunit) 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 5.8S ribosomal RNA, ... 著者 Abeyrathne, P, Koh, C.S, Grant, T, Grigorieff, N, Korostelev, A.A. 登録日 2016-05-10 公開日 2016-10-05 最終更新日 2019-11-27 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Ensemble cryo-EM uncovers inchworm-like translocation of a viral IRES through the ribosome. Elife, 5, 2016
7OTC	Cryo-EM structure of an Escherichia coli 70S ribosome in complex with elongation factor G and the antibiotic Argyrin B 分子名称: 1,4-DIAMINOBUTANE, 16S ribosomal RNA, 23S ribosomal RNA, ... 著者 Wieland, M, Koller, T.O, Wilson, D.N. 登録日 2021-06-10 公開日 2022-05-11 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 The cyclic octapeptide antibiotic argyrin B inhibits translation by trapping EF-G on the ribosome during translocation. Proc.Natl.Acad.Sci.USA, 119, 2022
7PAK	70S ribosome with EF-Tu-tRNA and P-site tRNA in Mycoplasma pneumoniae cells 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Xue, L, Lenz, S, Rappsilber, J, Mahamid, J. 登録日 2021-07-30 公開日 2022-05-25 最終更新日 2022-10-19 実験手法 ELECTRON MICROSCOPY (5.3 Å) 主引用文献 Visualizing translation dynamics at atomic detail inside a bacterial cell. Nature, 610, 2022
7PAR	70S ribosome with EF-G, ap/P- and pe/E-site tRNAs in Mycoplasma pneumoniae cells 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Xue, L, Lenz, S, Rappsilber, J, Mahamid, J. 登録日 2021-07-30 公開日 2022-05-25 最終更新日 2022-10-19 実験手法 ELECTRON MICROSCOPY (8.2 Å) 主引用文献 Visualizing translation dynamics at atomic detail inside a bacterial cell. Nature, 610, 2022
7PAQ	70S ribosome with EF-G, A/P- and P/E-site tRNAs in Mycoplasma pneumoniae cells 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Xue, L, Lenz, S, Rappsilber, J, Mahamid, J. 登録日 2021-07-30 公開日 2022-05-25 最終更新日 2022-10-19 実験手法 ELECTRON MICROSCOPY (8.9 Å) 主引用文献 Visualizing translation dynamics at atomic detail inside a bacterial cell. Nature, 610, 2022
7PAJ	70S ribosome with EF-Tu-tRNA, P- and E-site tRNAs in Mycoplasma pneumoniae cells 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Xue, L, Lenz, S, Rappsilber, J, Mahamid, J. 登録日 2021-07-30 公開日 2022-05-25 最終更新日 2022-10-19 実験手法 ELECTRON MICROSCOPY (7.3 Å) 主引用文献 Visualizing translation dynamics at atomic detail inside a bacterial cell. Nature, 610, 2022
7PAO	70S ribosome with EF-G, A*- and P/E-site tRNAs in Mycoplasma pneumoniae cells 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Xue, L, Lenz, S, Rappsilber, J, Mahamid, J. 登録日 2021-07-30 公開日 2022-05-25 最終更新日 2022-10-19 実験手法 ELECTRON MICROSCOPY (7 Å) 主引用文献 Visualizing translation dynamics at atomic detail inside a bacterial cell. Nature, 610, 2022

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