PDB: 1104 件ウェブページステータス検索Chemie searchBIRD

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4JGE	Crystal structure of red fluorescent gene-engineered variant with improved folding - lanRFP_delS83 (Branchiostoma lanceolatum) 分子名称: GLYCEROL, Red fluorescent protein blFP-R5 著者 Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V. 登録日 2013-03-01 公開日 2013-09-18 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.94 Å) 主引用文献 Structure of the red fluorescent protein from a lancelet (Branchiostoma lanceolatum): a novel GYG chromophore covalently bound to a nearby tyrosine. Acta Crystallogr.,Sect.D, 69, 2013
4JRB	Structure of Cockroach Allergen Bla g 1 Tandem Repeat as a EGFP fusion 分子名称: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, CHLORIDE ION, DODECANE, ... 著者 Mueller, G.A, Pedersen, L.C, Lih, F.B, Glesner, J, Moon, A.F, Chapman, M.D, Tomer, K, London, R.E. 登録日 2013-03-21 公開日 2013-07-24 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (2.414 Å) 主引用文献 The novel structure of the cockroach allergen Bla g 1 has implications for allergenicity and exposure assessment. J.Allergy Clin.Immunol., 132, 2013
4KAG	Crystal structure analysis of a single amino acid deletion mutation in EGFP 分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Green fluorescent protein, ... 著者 Arpino, J.A.J, Rizkallah, P.J. 登録日 2013-04-22 公開日 2014-08-06 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.12 Å) 主引用文献 Structural and dynamic changes associated with beneficial engineered single-amino-acid deletion mutations in enhanced green fluorescent protein. Acta Crystallogr.,Sect.D, 70, 2014
4KA9	Crystal structure analysis of single amino acid deletion mutations in EGFP 分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Green fluorescent protein, ... 著者 Arpino, J.A.J, Rizkallah, P.J. 登録日 2013-04-22 公開日 2014-05-07 最終更新日 2015-11-25 実験手法 X-RAY DIFFRACTION (1.58 Å) 主引用文献 Random single amino acid deletion sampling unveils structural tolerance and the benefits of helical registry shift on GFP folding and structure. Structure, 22, 2014
4KEX	Crystal structure analysis of a single amino acid deletion mutation in EGFP 分子名称: Green fluorescent protein 著者 Arpino, J.A.J, Rizkallah, P.J. 登録日 2013-04-26 公開日 2014-08-06 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structural and dynamic changes associated with beneficial engineered single-amino-acid deletion mutations in enhanced green fluorescent protein. Acta Crystallogr.,Sect.D, 70, 2014
4KF5	Crystal Structure of Split GFP complexed with engineered sfCherry with an insertion of GFP fragment 分子名称: fluorescent protein GFP1-9, fluorescent protein sfCherry+GFP10-11 著者 Nguyen, H.B, Hung, L.-W, Yeates, T.O, Waldo, G.S, Terwilliger, T.C. 登録日 2013-04-26 公開日 2013-12-18 実験手法 X-RAY DIFFRACTION (2.599 Å) 主引用文献 Split green fluorescent protein as a modular binding partner for protein crystallization. Acta Crystallogr.,Sect.D, 69, 2013
4KF4	Crystal Structure of sfCherry 分子名称: fluorescent protein sfCherry 著者 Nguyen, H.B, Hung, L.-W, Yeates, T.O, Waldo, G.S, Terwilliger, T.C. 登録日 2013-04-26 公開日 2013-12-18 実験手法 X-RAY DIFFRACTION (1.994 Å) 主引用文献 Split green fluorescent protein as a modular binding partner for protein crystallization. Acta Crystallogr.,Sect.D, 69, 2013
4KGF	Crystal structure of near-infrared fluorescent protein with an extended stokes shift, ph 8.0 分子名称: CHLORIDE ION, TagRFP675, red fluorescent protein 著者 Malashkevich, V.N, Piatkevich, K, Almo, S.C, Verkhusha, V, New York Structural Genomics Research Consortium (NYSGRC) 登録日 2013-04-29 公開日 2013-05-08 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Extended Stokes shift in fluorescent proteins: chromophore-protein interactions in a near-infrared TagRFP675 variant. Sci Rep, 3, 2013
4KGE	Crystal structure of near-infrared fluorescent protein with an extended stokes shift, pH 4.5 分子名称: CHLORIDE ION, TagRFP675, red fluorescent protein 著者 Malashkevich, V.N, Piatkevich, K, Almo, S.C, Verkhusha, V, New York Structural Genomics Research Consortium (NYSGRC) 登録日 2013-04-29 公開日 2013-05-08 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Extended Stokes shift in fluorescent proteins: chromophore-protein interactions in a near-infrared TagRFP675 variant. Sci Rep, 3, 2013
4KW8	Crystal Structure of Green Fluorescent Protein 分子名称: Green fluorescent protein, NICKEL (II) ION 著者 Barnard, T.J, Yu, X, Noinaj, N, Taraska, J.W. 登録日 2013-05-23 公開日 2014-04-09 最終更新日 2022-12-21 実験手法 X-RAY DIFFRACTION (2.459 Å) 主引用文献 Crystal Structure of Green Fluorescent Protein To be Published
4KW4	Crystal Structure of Green Fluorescent Protein 分子名称: Green fluorescent protein 著者 Barnard, T.J, Yu, X, Noinaj, N, Taraska, J.W. 登録日 2013-05-23 公開日 2014-04-09 最終更新日 2022-12-21 実験手法 X-RAY DIFFRACTION (1.746 Å) 主引用文献 Crystal Structure of Green Fluorescent Protein To be Published
4KW9	Crystal Structure of Green Fluorescent Protein 分子名称: CHLORIDE ION, Green fluorescent protein, ZINC ION 著者 Barnard, T.J, Yu, X, Noinaj, N, Taraska, J.W. 登録日 2013-05-23 公開日 2014-04-09 最終更新日 2022-12-21 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Crystal Structure of Green Fluorescent Protein To be Published
3WCK	Crystal structure of monomeric photosensitizing fluorescent protein, Supernova 分子名称: Monomeric photosenitizing fluorescent protein supernova 著者 Sakai, N, Matsuda, T, Takemoto, K, Nagai, T. 登録日 2013-05-27 公開日 2013-10-02 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 SuperNova, a monomeric photosensitizing fluorescent protein for chromophore-assisted light inactivation Sci Rep, 3, 2013
4KZE	Crystal structure of an RNA aptamer in complex with Fab 分子名称: BL3-6 Fab antibody, heavy chain, light chain, ... 著者 Huang, H, Suslov, N.B, Li, N, Koldobskaya, Y, Rice, P.A, Piccirilli, J.A. 登録日 2013-05-29 公開日 2014-06-18 最終更新日 2014-07-30 実験手法 X-RAY DIFFRACTION (2.404 Å) 主引用文献 A G-quadruplex-containing RNA activates fluorescence in a GFP-like fluorophore. Nat.Chem.Biol., 10, 2014
4KZD	Crystal structure of an RNA aptamer in complex with fluorophore and Fab 分子名称: 4-(3,5-difluoro-4-hydroxybenzyl)-1,2-dimethyl-1H-imidazol-5-ol, BL3-6 Fab antibody, heavy chain, ... 著者 Huang, H, Suslov, N.B, Li, N, Koldobskaya, Y, Rice, P.A, Piccirilli, J.A. 登録日 2013-05-29 公開日 2014-06-18 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.186 Å) 主引用文献 A G-quadruplex-containing RNA activates fluorescence in a GFP-like fluorophore. Nat.Chem.Biol., 10, 2014
4L13	Crystal structure of Ligand Free EGFP-based Calcium Sensor CatchER 分子名称: ACETIC ACID, EGFP-based Calcium Sensor CatchER 著者 Zhang, Y, Weber, I.T. 登録日 2013-06-01 公開日 2013-12-11 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.66 Å) 主引用文献 Structural basis for a hand-like site in the calcium sensor CatchER with fast kinetics. Acta Crystallogr.,Sect.D, 69, 2013
4L12	Crystal structure of EGFP-based Calcium Sensor CatchER complexed with Gd 分子名称: EGFP-based Calcium Sensor CatchER, GADOLINIUM ATOM 著者 Zhang, Y, Weber, I.T. 登録日 2013-06-01 公開日 2013-12-11 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.78 Å) 主引用文献 Structural basis for a hand-like site in the calcium sensor CatchER with fast kinetics. Acta Crystallogr.,Sect.D, 69, 2013
4L1I	Crystal structure of EGFP-based Calcium Sensor CatchER complexed with Ca 分子名称: CALCIUM ION, EGFP-based Calcium Sensor CatchER 著者 Zhang, Y, Weber, I.T. 登録日 2013-06-03 公開日 2013-12-11 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Structural basis for a hand-like site in the calcium sensor CatchER with fast kinetics. Acta Crystallogr.,Sect.D, 69, 2013
4LQT	1.10A resolution crystal structure of a superfolder green fluorescent protein (W57A) mutant 分子名称: 1,2-ETHANEDIOL, Green fluorescent protein 著者 Lovell, S, Xia, Y, Vo, B, Battaile, K.P, Egan, C, Karanicolas, J. 登録日 2013-07-19 公開日 2013-12-18 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 The designability of protein switches by chemical rescue of structure: mechanisms of inactivation and reactivation. J.Am.Chem.Soc., 135, 2013
4LQU	1.60A resolution crystal structure of a superfolder green fluorescent protein (W57G) mutant 分子名称: Green fluorescent protein 著者 Lovell, S, Xia, Y, Vo, B, Battaile, K.P, Egan, C, Karanicolas, J. 登録日 2013-07-19 公開日 2013-12-18 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 The designability of protein switches by chemical rescue of structure: mechanisms of inactivation and reactivation. J.Am.Chem.Soc., 135, 2013
4LW5	Crystal structure of all-trans green fluorescent protein 分子名称: Green fluorescent protein 著者 Rosenman, D.J, Huang, Y.-M, Xia, K, Vanroey, P, Colon, W, Bystroff, C. 登録日 2013-07-26 公開日 2014-02-05 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 Green-lighting green fluorescent protein: Faster and more efficient folding by eliminating a cis-trans peptide isomerization event. Protein Sci., 23, 2014
4M48	X-ray structure of dopamine transporter elucidates antidepressant mechanism 分子名称: 9D5 antibody, heavy chain, light chain, ... 著者 Gouaux, E, Penmatsa, A, Wang, K. 登録日 2013-08-06 公開日 2013-09-18 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.955 Å) 主引用文献 X-ray structure of dopamine transporter elucidates antidepressant mechanism. Nature, 503, 2013
4N3D	Crystal structure of the dimeric variant EGFP-K162Q in P61 space group 分子名称: GLYCEROL, Green fluorescent protein, PHOSPHATE ION, ... 著者 Pletneva, N.V, Pletnev, V.Z, Pletnev, S.V. 登録日 2013-10-07 公開日 2014-08-27 実験手法 X-RAY DIFFRACTION (1.34 Å) 主引用文献 Three dimensional structure of the dimeric gene-engineered variant of green fluorescent protein egfp-K162Q in P61 crystal space group Rus.J.Bioorg.Chem., 40, 2014
4NDK	Crystal structure of a computational designed engrailed homeodomain variant fused with YFP 分子名称: E23P-YFP, GFP-like fluorescent chromoprotein FP506, related, ... 著者 Mou, Y, Mayo, S.L. 登録日 2013-10-26 公開日 2014-11-05 最終更新日 2017-10-18 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Using Molecular Dynamics Simulations as an Aid in the Prediction of Domain Swapping of Computationally Designed Protein Variants. J.Mol.Biol., 427, 2015
4NDJ	Crystal Structure of a computational designed engrailed homeodomain variant fused with YFP 分子名称: Green fluorescent protein, chimeric construct,GFP-like fluorescent chromoprotein FP506, related 著者 Mou, Y, Mayo, S.L. 登録日 2013-10-26 公開日 2014-11-05 最終更新日 2017-10-18 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Using Molecular Dynamics Simulations as an Aid in the Prediction of Domain Swapping of Computationally Designed Protein Variants. J.Mol.Biol., 427, 2015

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