PDB: 5515 件ウェブページステータス検索Chemie searchBIRD

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4YLN	E. coli Transcription Initiation Complex - 17-bp spacer and 4-nt RNA 分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... 著者 Zuo, Y, Steitz, T.A. 登録日 2015-03-05 公開日 2015-04-22 最終更新日 2019-12-25 実験手法 X-RAY DIFFRACTION (5.5 Å) 主引用文献 Crystal Structures of the E. coli Transcription Initiation Complexes with a Complete Bubble. Mol.Cell, 58, 2015
4YDT	Beta1 synthetic solenoid protein 分子名称: beta1 protein 著者 Murray, J.W. 登録日 2015-02-23 公開日 2016-03-09 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.31 Å) 主引用文献 Synthetic beta-solenoid proteins with the fragment-free computational design of a beta-hairpin extension. Proc.Natl.Acad.Sci.USA, 113, 2016
5XZI	Crystal structure of the Zn-directed tetramer of the engineered cyt cb562 variant, AB5 分子名称: CHLORIDE ION, HEME C, Soluble cytochrome b562, ... 著者 Song, W.J, Tezcan, F.A. 登録日 2017-07-12 公開日 2017-12-20 最終更新日 2019-10-02 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Importance of Scaffold Flexibility/Rigidity in the Design and Directed Evolution of Artificial Metallo-beta-lactamases. J. Am. Chem. Soc., 139, 2017
5W98	Pyridine synthase, PbtD, from GE2270 biosynthesis 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, PbtD 著者 Cogan, D.P, Nair, S.K. 登録日 2017-06-22 公開日 2017-11-22 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.23 Å) 主引用文献 Structural insights into enzymatic [4+2] aza-cycloaddition in thiopeptide antibiotic biosynthesis. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5WA3	Pyridine synthase, TbtD, from thiomuracin biosynthesis 分子名称: Pyridine synthase TbtD 著者 Cogan, D.P, Nair, S.K. 登録日 2017-06-24 公開日 2017-11-22 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural insights into enzymatic [4+2] aza-cycloaddition in thiopeptide antibiotic biosynthesis. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5XZJ	Crystal structure of the Zn-directed tetramer of the engineered cyt cb562 variant, C96T/AB5 分子名称: CHLORIDE ION, HEME C, Soluble cytochrome b562, ... 著者 Song, W.J, Tezcan, F.A. 登録日 2017-07-12 公開日 2017-12-20 最終更新日 2022-03-23 実験手法 X-RAY DIFFRACTION (1.98 Å) 主引用文献 Importance of Scaffold Flexibility/Rigidity in the Design and Directed Evolution of Artificial Metallo-beta-lactamases. J. Am. Chem. Soc., 139, 2017
8WOV	Crystal structure of Arabidopsis thaliana UDP-glucose 4-epimerase 2 (AtUGE2) complexed with UDP, G233A mutant 分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, UDP-glucose 4-epimerase 2, URIDINE-5'-DIPHOSPHATE 著者 Matsumoto, M, Umezawa, A, Kotake, T, Fushinobu, S. 登録日 2023-10-07 公開日 2024-05-15 最終更新日 2024-07-10 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Cytosolic UDP-L-arabinose synthesis by bifunctional UDP-glucose 4-epimerases in Arabidopsis. Plant J., 119, 2024
8WOW	Crystal structure of Arabidopsis thaliana UDP-glucose 4-epimerase 2 (AtUGE2) complexed with UDP, I160L/G233A mutant 分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION, UDP-glucose 4-epimerase 2, ... 著者 Matsumoto, M, Umezawa, A, Kotake, T, Fushinobu, S. 登録日 2023-10-08 公開日 2024-05-15 最終更新日 2024-07-10 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Cytosolic UDP-L-arabinose synthesis by bifunctional UDP-glucose 4-epimerases in Arabidopsis. Plant J., 119, 2024
8WOP	Crystal structure of Arabidopsis thaliana UDP-glucose 4-epimerase 2 (AtUGE2) complexed with UDP, wild-type 分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, UDP-glucose 4-epimerase 2, URIDINE-5'-DIPHOSPHATE 著者 Matsumoto, M, Umezawa, A, Kotake, T, Fushinobu, S. 登録日 2023-10-07 公開日 2024-05-08 最終更新日 2024-07-10 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Cytosolic UDP-L-arabinose synthesis by bifunctional UDP-glucose 4-epimerases in Arabidopsis. Plant J., 119, 2024
5F73	Crystal structure of Mutant S12T of Adenosine/Methylthioadenosine Phosphorylase in APO form 分子名称: Methylthioadenosine phosphorylase, SULFATE ION 著者 Torini, J.R.S, Brandao-Neto, J, DeMarco, R, Pereira, H.M. 登録日 2015-12-07 公開日 2016-12-14 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.06 Å) 主引用文献 Crystal Structure of Schistosoma mansoni Adenosine Phosphorylase/5'-Methylthioadenosine Phosphorylase and Its Importance on Adenosine Salvage Pathway. PLoS Negl Trop Dis, 10, 2016
5F77	Crystal structure of Mutant S12T of adenosine/Methylthioadenosine phosphorylase from Schistosoma mansoni in complex with Adenine 分子名称: ADENINE, Methylthioadenosine phosphorylase, SULFATE ION 著者 Torini, J.R.S, Brandao-Neto, J, DeMarco, R, Pereira, H.M. 登録日 2015-12-07 公開日 2016-12-14 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.02 Å) 主引用文献 Crystal Structure of Schistosoma mansoni Adenosine Phosphorylase/5'-Methylthioadenosine Phosphorylase and Its Importance on Adenosine Salvage Pathway. PLoS Negl Trop Dis, 10, 2016
5F76	Crystal structure of Mutant S12T of Adenosine/Methylthioadenosine Phosphorylase from Schistosoma mansoni in complex with Methylthioadenosine 分子名称: 5'-DEOXY-5'-METHYLTHIOADENOSINE, Methylthioadenosine phosphorylase, SULFATE ION 著者 Torini, J.R.S, Brandao-Neto, J, DeMarco, R, Pereira, H.M. 登録日 2015-12-07 公開日 2016-12-14 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Crystal Structure of Schistosoma mansoni Adenosine Phosphorylase/5'-Methylthioadenosine Phosphorylase and Its Importance on Adenosine Salvage Pathway. PLoS Negl Trop Dis, 10, 2016
5F7X	Crystal structure of Mutant Q289L of adenosine/Methylthioadenosine phosphorylase from Schistosoma mansoni in complex with Tubercidin 分子名称: '2-(4-AMINO-PYRROLO[2,3-D]PYRIMIDIN-7-YL)-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-3,4-DIOL, Methylthioadenosine phosphorylase, SULFATE ION 著者 Torini, J.R, Brandao-Neto, J, DeMarco, R, Pereira, H.M. 登録日 2015-12-08 公開日 2016-12-14 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.77 Å) 主引用文献 Crystal Structure of Schistosoma mansoni Adenosine Phosphorylase/5'-Methylthioadenosine Phosphorylase and Its Importance on Adenosine Salvage Pathway. PLoS Negl Trop Dis, 10, 2016
5F78	Crystal structure of Mutant N87T of adenosine/Methylthioadenosine phosphorylase from Schistosoma mansoni in APO form 分子名称: Methylthioadenosine phosphorylase, SULFATE ION 著者 Torini, J.R.S, Brandao-Neto, J, DeMarco, R, Pereira, H.M. 登録日 2015-12-07 公開日 2016-12-21 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.8518 Å) 主引用文献 Crystal Structure of Schistosoma mansoni Adenosine Phosphorylase/5'-Methylthioadenosine Phosphorylase and Its Importance on Adenosine Salvage Pathway. PLoS Negl Trop Dis, 10, 2016
5FAK	Crystal structure of Double Mutant S12T and N87T of Adenosine/Methylthioadenosine Phosphorylase from Schistosoma mansoni in complex with Adenine 分子名称: ADENINE, Methylthioadenosine phosphorylase, SULFATE ION 著者 Torini, J.R, Brandao-Neto, J, DeMarco, R, Pereira, H.M. 登録日 2015-12-11 公開日 2016-12-14 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.87 Å) 主引用文献 Crystal Structure of Schistosoma mansoni Adenosine Phosphorylase/5'-Methylthioadenosine Phosphorylase and Its Importance on Adenosine Salvage Pathway. PLoS Negl Trop Dis, 10, 2016
5F7O	Crystal structure of Mutant Q289L of adenosine/Methylthioadenosine phosphorylase from Schistosoma mansoni in complex with Adenine 分子名称: ADENINE, Methylthioadenosine phosphorylase, SULFATE ION 著者 Torini, J.R, Brandao-Neto, J, DeMarco, R, Pereira, H.M. 登録日 2015-12-08 公開日 2016-12-14 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.8148 Å) 主引用文献 Crystal Structure of Schistosoma mansoni Adenosine Phosphorylase/5'-Methylthioadenosine Phosphorylase and Its Importance on Adenosine Salvage Pathway. PLoS Negl Trop Dis, 10, 2016
5FGT	Thaumatin solved by native sulphur-SAD using free-electron laser radiation 分子名称: L(+)-TARTARIC ACID, Thaumatin-1 著者 Nass, K.J, Meinhart, A, Barends, T.R.M, Foucar, L, Gorel, A, Aquila, A, Botha, S, Doak, R.B, Koglin, J, Liang, M, Shoeman, R.L, Williams, G.K, Boutet, S, Schlichting, I. 登録日 2015-12-21 公開日 2016-06-08 最終更新日 2018-11-14 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Protein structure determination by single-wavelength anomalous diffraction phasing of X-ray free-electron laser data. Iucrj, 3, 2016
5FGX	Thaumatin solved by native sulphur SAD using synchrotron radiation 分子名称: L(+)-TARTARIC ACID, Thaumatin-1 著者 Nass, K.J, Meinhart, A, Barends, T.R.M, Foucar, L, Gorel, A, Aquila, A, Botha, S, Doak, R.B, Koglin, J, Liang, M, Shoeman, R.L, Williams, G.J, Boutet, S, Schlichting, I. 登録日 2015-12-21 公開日 2016-06-08 実験手法 X-RAY DIFFRACTION (2.134 Å) 主引用文献 Protein structure determination by single-wavelength anomalous diffraction phasing of X-ray free-electron laser data. Iucrj, 3, 2016
5D1Y	Low resolution crystal structure of human ribonucleotide reductase alpha6 hexamer in complex with dATP 分子名称: Ribonucleoside-diphosphate reductase large subunit 著者 Ando, N, Li, H, Brignole, E.J, Thompson, S, McLaughlin, M.I, Page, J, Asturias, F, Stubbe, J, Drennan, C.L. 登録日 2015-08-04 公開日 2016-01-20 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (9.005 Å) 主引用文献 Allosteric Inhibition of Human Ribonucleotide Reductase by dATP Entails the Stabilization of a Hexamer. Biochemistry, 55, 2016
5D4E	Crystal structure of Thermus thermophilus product complex for transcription initiation with 3'-dephosphate-CoA and CTP 分子名称: CYTIDINE-5'-MONOPHOSPHATE, DEPHOSPHO COENZYME A, DIPHOSPHATE, ... 著者 Zhang, Y, Ebright, R.H. 登録日 2015-08-07 公開日 2016-07-06 最終更新日 2024-07-03 実験手法 X-RAY DIFFRACTION (3.08 Å) 主引用文献 The mechanism of RNA 5' capping with NAD(+), NADH and desphospho-CoA. Nature, 535, 2016
3HSD	Crystal structure of E. coli HPPK(Y53A) 分子名称: CHLORIDE ION, GLYCEROL, HPPK, ... 著者 Blaszczyk, J, Li, Y, Yan, H, Ji, X. 登録日 2009-06-10 公開日 2010-06-23 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.652 Å) 主引用文献 Pterin-binding site mutation Y53A, N55A or F123A and activity of E. coli HPPK. To be Published
3ILL	Crystal structure of E. coli HPPK(D97A) 分子名称: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, CHLORIDE ION 著者 Blaszczyk, J, Li, Y, Yan, H, Ji, X. 登録日 2009-08-07 公開日 2010-08-11 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.73 Å) 主引用文献 Structural and functional roles of residues D95 and D97 in E. coli HPPK To be Published
3ILI	Crystal structure of E. coli HPPK(D95A) 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, ACETATE ION, ... 著者 Blaszczyk, J, Li, Y, Yan, H, Ji, X. 登録日 2009-08-07 公開日 2010-08-11 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Structural and functional roles of residues D95 and D97 in E. coli HPPK To be Published
3HCX	Crystal structure of E. coli HPPK(N10A) 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, CHLORIDE ION 著者 Blaszczyk, J, Li, Y, Yan, H, Ji, X. 登録日 2009-05-06 公開日 2010-05-19 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Role of loop coupling in enzymatic catalysis and conformational dynamics To be Published
3HSZ	Crystal structure of E. coli HPPK(F123A) 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, CHLORIDE ION, ... 著者 Blaszczyk, J, Li, Y, Yan, H, Ji, X. 登録日 2009-06-11 公開日 2010-06-23 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Pterin-binding site mutation Y53A, N55A or F123A and activity of E. coli HPPK To be Published

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