PDB: 41454 件ウェブページステータス検索Chemie searchBIRD

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3VVW	NDP52 in complex with LC3C 分子名称: Calcium-binding and coiled-coil domain-containing protein 2, Microtubule-associated proteins 1A/1B light chain 3C 著者 Akutsu, M, Muhlinen, N.V, Randow, F, Komander, D. 登録日 2012-07-28 公開日 2013-02-27 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 LC3C, bound selectively by a noncanonical LIR motif in NDP52, is required for antibacterial autophagy Mol.Cell, 48, 2012
4I9X	Crystal structure of human cytomegalovirus glycoprotein UL141 targeting the death receptor TRAIL-R2 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... 著者 Nemcovicova, I, Zajonc, D.M. 登録日 2012-12-05 公開日 2013-04-03 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure of Human Cytomegalovirus UL141 Binding to TRAIL-R2 Reveals Novel, Non-canonical Death Receptor Interactions. Plos Pathog., 9, 2013
8PSE	(3+1) hybrid G-quadruplex from a G-rich sequence with five G-runs 分子名称: DNA (5'-D(*AP*GP*GP*GP*TP*AP*GP*GP*GP*CP*GP*GP*CP*GP*(BG)P*GP*TP*AP*CP*GP*GP*GP*T)-3') 著者 Jana, J, Vianney, Y.M, Schroder, N, Weisz, K. 登録日 2023-07-13 公開日 2023-09-27 最終更新日 2023-10-18 実験手法 SOLUTION NMR 主引用文献 Showcasing Different G-Quadruplex Folds of a G-Rich Sequence: Between Rule-Based Prediction and Butterfly Effect. J.Am.Chem.Soc., 145, 2023
8PSI	G-quadruplex with a 1-nt V-shaped loop from a G-rich sequence with five G-runs 分子名称: DNA (5'-D(*GP*GP*GP*TP*AP*GP*GP*GP*CP*GP*GP*CP*GP*GP*GP*GP*CP*AP*GP*GP*GP*T)-3') 著者 Vianney, Y.M, Schroeder, N, Jana, J, Weisz, K. 登録日 2023-07-13 公開日 2023-09-27 最終更新日 2023-10-18 実験手法 SOLUTION NMR 主引用文献 Showcasing Different G-Quadruplex Folds of a G-Rich Sequence: Between Rule-Based Prediction and Butterfly Effect. J.Am.Chem.Soc., 145, 2023
8PSC	Three-layered basket-type G-quadruplex from a G-rich sequence with five G-runs 分子名称: DNA (5'-D(*AP*GP*(BG)P*GP*TP*AP*GP*GP*GP*CP*GP*GP*CP*GP*GP*GP*GP*CP*AP*GP*GP*GP*T)-3') 著者 Vianney, Y.M, Schroeder, N, Jana, J, Weisz, K. 登録日 2023-07-13 公開日 2023-09-27 最終更新日 2023-10-18 実験手法 SOLUTION NMR 主引用文献 Showcasing Different G-Quadruplex Folds of a G-Rich Sequence: Between Rule-Based Prediction and Butterfly Effect. J.Am.Chem.Soc., 145, 2023
8PSB	Three-layered parallel G-quadruplex with snapback loop from a G-rich sequence with five G-runs 分子名称: DNA (5'-D(*AP*GP*GP*GP*TP*AP*GP*GP*GP*CP*GP*GP*CP*GP*GP*GP*GP*AP*CP*GP*GP*GP*T)-3') 著者 Vianney, Y.M, Schroeder, N, Jana, J, Chojetzki, G, Weisz, K. 登録日 2023-07-13 公開日 2023-09-27 最終更新日 2023-10-25 実験手法 SOLUTION NMR 主引用文献 Showcasing Different G-Quadruplex Folds of a G-Rich Sequence: Between Rule-Based Prediction and Butterfly Effect. J.Am.Chem.Soc., 145, 2023
8PU0	Cryo-EM structure of human Elp123 in complex with tRNA, desulpho-CoA, 5'-deoxyadenosine and methionine 分子名称: 5'-DEOXYADENOSINE, DESULFO-COENZYME A, Elongator complex protein 1, ... 著者 Abbassi, N, Jaciuk, M, Lin, T.-Y, Glatt, S. 登録日 2023-07-16 公開日 2024-04-17 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (4.25 Å) 主引用文献 Cryo-EM structures of the human Elongator complex at work. Nat Commun, 15, 2024
8PTZ	Cryo-EM structure of human Elp123 in complex with tRNA, S-ethyl-CoA, 5'-deoxyadenosine and methionine 分子名称: 5'-DEOXYADENOSINE, Elongator complex protein 1, Elongator complex protein 2, ... 著者 Abbassi, N, Jaciuk, M, Lin, T.-Y, Glatt, S. 登録日 2023-07-16 公開日 2024-04-17 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3.35 Å) 主引用文献 Cryo-EM structures of the human Elongator complex at work. Nat Commun, 15, 2024
8PTY	Cryo-EM structure of human Elp123 in complex with 5'-deoxyadenosine and methionine 分子名称: 5'-DEOXYADENOSINE, Elongator complex protein 1, Elongator complex protein 2, ... 著者 Abbassi, N, Jaciuk, M, Lin, T.-Y, Glatt, S. 登録日 2023-07-16 公開日 2024-04-17 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3.58 Å) 主引用文献 Cryo-EM structures of the human Elongator complex at work. Nat Commun, 15, 2024
6IZ2	Crystal structure of DinB/YfiT protein DR0053 from D. radiodurans R1 分子名称: ACETATE ION, DinB/YfiT family protein, ZINC ION 著者 Kim, M.-K, Zhang, J, Zhao, L. 登録日 2018-12-18 公開日 2019-05-15 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2.069 Å) 主引用文献 Crystal structure of the highly radiation-inducible DinB/YfiT superfamily protein DR0053 from Deinococcus radiodurans R1. Biochem.Biophys.Res.Commun., 513, 2019
4LNQ	Crystal structure of Ifi202 HINa domain in complex with 20bp dsDNA 分子名称: 20bp DNA, Interferon-activable protein 202 著者 Li, H, Wang, Z.-X, Wu, J.-W. 登録日 2013-07-12 公開日 2014-01-08 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural mechanism of DNA recognition by the p202 HINa domain: insights into the inhibition of Aim2-mediated inflammatory signalling. Acta Crystallogr F Struct Biol Commun, 70, 2014
6HE0	Crystal structure of 2-Hydroxyisobutyryl-CoA Ligase (HCL) in complex with 2-HIB-AMP and CoA in the thioesterfication state 分子名称: 2-hydroxyisobutyryl-CoA synthetase, ADENOSINE MONOPHOSPHATE, COENZYME A, ... 著者 Zahn, M, Rohwerder, T, Strater, N. 登録日 2018-08-20 公開日 2019-08-28 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.31 Å) 主引用文献 Structures of 2-Hydroxyisobutyric Acid-CoA Ligase Reveal Determinants of Substrate Specificity and Describe a Multi-Conformational Catalytic Cycle. J.Mol.Biol., 431, 2019
8PTX	Cryo-EM structure of human Elp123 in complex with tRNA, acetyl-CoA, 5'-deoxyadenosine and methionine 分子名称: 5'-DEOXYADENOSINE, ACETYL COENZYME *A, Elongator complex protein 1, ... 著者 Abbassi, N, Jaciuk, M, Lin, T.-Y, Glatt, S. 登録日 2023-07-16 公開日 2024-04-17 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (2.87 Å) 主引用文献 Cryo-EM structures of the human Elongator complex at work. Nat Commun, 15, 2024
3ZNY	Crystal structure of the class A extended-spectrum beta-lactamase CTX- M-96, a natural D240G mutant derived from CTX-M-12 分子名称: CTX-M-12A ENZYME 著者 Power, P, Herman, R, Bouillenne, F, Ghiglione, B, Rodriguez, M.M, Galleni, M, Gutkind, G, Charlier, P, Sauvage, E. 登録日 2013-02-18 公開日 2014-01-08 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Structural and Kinetic Insights Into the "Ceftazidimase" Behavior of the Extended-Spectrum Beta-Lactamase Ctx-M-96. Biochemistry, 54, 2015
3ZRH	Crystal structure of the Lys29, Lys33-linkage-specific TRABID OTU deubiquitinase domain reveals an Ankyrin-repeat ubiquitin binding domain (AnkUBD) 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, UBIQUITIN THIOESTERASE ZRANB1 著者 Licchesi, J.D.F, Akutsu, M, Komander, D. 登録日 2011-06-16 公開日 2011-12-14 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.23 Å) 主引用文献 An Ankyrin-Repeat Ubiquitin-Binding Domain Determines Trabid'S Specificity for Atypical Ubiquitin Chains. Nat.Struct.Mol.Biol., 19, 2011
8QBJ	Structure of mBaoJin at pH 4.6 分子名称: CHLORIDE ION, mBaoJin 著者 Samygina, V.R, Vlaskina, A.V, Gabdulkhakov, A, Subach, O.M, Subach, F.V. 登録日 2023-08-24 公開日 2023-12-27 最終更新日 2024-04-24 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Bright and stable monomeric green fluorescent protein derived from StayGold. Nat.Methods, 21, 2024
4AGO	Structure of the p53 core domain mutant Y220C bound to the stabilizing small molecule PhiKan5174 分子名称: CELLULAR TUMOR ANTIGEN P53, TERT-BUTYL [3-(3-{[4-(DIETHYLAMINO)PIPERIDIN-1-YL]METHYL}-4-HYDROXY-5-IODOPHENYL)PROP-2-YN-1-YL]CARBAMATE, ZINC ION 著者 Joerger, A.C, Wilcken, R, Fersht, A.R, Boeckler, F.M. 登録日 2012-01-30 公開日 2012-03-21 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Halogen-Enriched Fragment Libraries as Leads for Drug Rescue of Mutant P53. J.Am.Chem.Soc., 134, 2012
6JFP	Crystal structure of the beta-glucosidase Bgl15 分子名称: beta-D-glucopyranose, beta-glucosidase 15 著者 Xie, W, Chen, R. 登録日 2019-02-11 公開日 2020-02-12 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Engineering of beta-Glucosidase Bgl15 with Simultaneously Enhanced Glucose Tolerance and Thermostability To Improve Its Performance in High-Solid Cellulose Hydrolysis. J.Agric.Food Chem., 68, 2020
4AGN	Structure of the p53 core domain mutant Y220C bound to the stabilizing small molecule PhiKan5116 分子名称: 2-{[4-(DIETHYLAMINO)PIPERIDIN-1-YL]METHYL}-4-(3-HYDROXYPROP-1-YN-1-YL)-6-IODOPHENOL, CELLULAR TUMOR ANTIGEN P53, ZINC ION 著者 Joerger, A.C, Wilcken, R, Boeckler, F.M, Fersht, A.R. 登録日 2012-01-30 公開日 2012-03-21 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Halogen-Enriched Fragment Libraries as Leads for Drug Rescue of Mutant P53. J.Am.Chem.Soc., 134, 2012
8QDD	Structure of mBaoJin at pH 8.5 分子名称: CHLORIDE ION, SULFATE ION, mBaoJin 著者 Samygina, V.R, Vlaskina, A.V, Gabdulkhakov, A, Subach, O.M, Subach, F.V. 登録日 2023-08-28 公開日 2023-12-27 最終更新日 2024-04-24 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Bright and stable monomeric green fluorescent protein derived from StayGold. Nat.Methods, 21, 2024
8Q79	Structure of mBaoJin at pH 6.5 分子名称: CHLORIDE ION, mBaoJin 著者 Samygina, V.R, Subach, O.M, Vlaskina, A.V, Nikolaeva, A.Y, Borshchevsky, V, Qin, W, Subach, F.V. 登録日 2023-08-15 公開日 2023-12-27 最終更新日 2024-04-24 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Bright and stable monomeric green fluorescent protein derived from StayGold. Nat.Methods, 21, 2024
3UZW	Crystal structure of 5beta-reductase (AKR1D1) E120H mutant in complex with NADP+ 分子名称: 3-oxo-5-beta-steroid 4-dehydrogenase, CHLORIDE ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE 著者 Chen, M, Christianson, D.W, Penning, T.M. 登録日 2011-12-07 公開日 2012-03-21 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.892 Å) 主引用文献 Conversion of Human Steroid 5beta-Reductase (AKR1D1) into 3β-Hydroxysteroid Dehydrogenase by Single Point Mutation E120H: EXAMPLE OF PERFECT ENZYME ENGINEERING. J.Biol.Chem., 287, 2012
3UZY	Crystal structure of 5beta-reductase (AKR1D1) E120H mutant in complex with NADP+ and 5beta-dihydrotestosterone 分子名称: 3-oxo-5-beta-steroid 4-dehydrogenase, 5-beta-DIHYDROTESTOSTERONE, CHLORIDE ION, ... 著者 Chen, M, Christianson, D.W, Penning, T.M. 登録日 2011-12-07 公開日 2012-03-21 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.832 Å) 主引用文献 Conversion of Human Steroid 5beta-Reductase (AKR1D1) into 3β-Hydroxysteroid Dehydrogenase by Single Point Mutation E120H: EXAMPLE OF PERFECT ENZYME ENGINEERING. J.Biol.Chem., 287, 2012
6K3D	Structure of multicopper oxidase mutant 分子名称: COPPER (II) ION, CU-O-CU LINKAGE, Multicopper oxidase 著者 Sakuraba, H, Ohshida, T, Satomura, T, Yoneda, K, Ohshima, T. 登録日 2019-05-17 公開日 2020-05-20 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.919 Å) 主引用文献 Activity enhancement of multicopper oxidase from a hyperthermophile via directed evolution, and its application as the element of a high performance biocathode. J.Biotechnol., 325, 2021
4AGQ	Structure of the p53 core domain mutant Y220C bound to the stabilizing small molecule PhiKan5196 分子名称: 2-{[4-(diethylamino)piperidin-1-yl]methyl}-6-iodo-4-[3-(phenylamino)prop-1-yn-1-yl]phenol, CELLULAR TUMOR ANTIGEN P53, ZINC ION 著者 Joerger, A.C, Wilcken, R, Boeckler, F.M, Fersht, A.R. 登録日 2012-01-30 公開日 2012-03-21 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.42 Å) 主引用文献 Halogen-Enriched Fragment Libraries as Leads for Drug Rescue of Mutant P53. J.Am.Chem.Soc., 134, 2012

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