PDB: 434 件ウェブページステータス検索Chemie searchBIRD

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8A7H	Crystal structure of a chimeric LOV-Histidine kinase SB2F1-I66R mutant (light state; asymmetrical variant, trigonal form with long c axis) 分子名称: ADENOSINE-5'-TRIPHOSPHATE, Flavin mononucleotide (semi-quinone intermediate), Putative Sensory box protein,Sensor protein FixL 著者 Arinkin, V, Granzin, J, Batra-Safferling, R. 登録日 2022-06-21 公開日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.145 Å) 主引用文献 Crystal structure of a chimeric LOV-Histidine kinase SB2F1-I66R mutant (light state; asymmetrical variant, trigonal form with long c axis) To Be Published
2C2A	Structure of the entire cytoplasmic portion of a sensor histidine kinase protein 分子名称: ADENOSINE-5'-DIPHOSPHATE, SENSOR HISTIDINE KINASE, SULFATE ION 著者 Marina, A, Waldburger, C.D, Hendrickson, W.A. 登録日 2005-09-27 公開日 2005-11-21 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure of the Entire Cytoplasmic Portion of a Sensor Histidine-Kinase Protein. Embo J., 24, 2005
8AVX	Cryo-EM structure of DrBphP in Pfr state 分子名称: BILIVERDINE IX ALPHA, Bacteriophytochrome,Response regulator 著者 Wahlgren, W.Y, Takala, H, Westenhoff, S. 登録日 2022-08-27 公開日 2022-12-21 最終更新日 2022-12-28 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structural mechanism of signal transduction in a phytochrome histidine kinase. Nat Commun, 13, 2022
8AVV	Cryo-EM structure of DrBphP photosensory module in Pr state 分子名称: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, Bacteriophytochrome,Response regulator 著者 Wahlgren, W.Y, Takala, H, Westenhoff, S. 登録日 2022-08-27 公開日 2022-12-21 最終更新日 2022-12-28 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structural mechanism of signal transduction in a phytochrome histidine kinase. Nat Commun, 13, 2022
8AVW	Cryo-EM structure of DrBphP in Pr state 分子名称: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, Bacteriophytochrome,Response regulator 著者 Wahlgren, W.Y, Takala, H, Westenhoff, S. 登録日 2022-08-27 公開日 2022-12-21 最終更新日 2022-12-28 実験手法 ELECTRON MICROSCOPY (3.62 Å) 主引用文献 Structural mechanism of signal transduction in a phytochrome histidine kinase. Nat Commun, 13, 2022
2CG9	Crystal structure of an Hsp90-Sba1 closed chaperone complex 分子名称: ADENOSINE-5'-TRIPHOSPHATE, ATP-DEPENDENT MOLECULAR CHAPERONE HSP82, CO-CHAPERONE PROTEIN SBA1 著者 Ali, M.M.U, Roe, S.M, Prodromou, C, Pearl, L.H. 登録日 2006-03-01 公開日 2006-04-12 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Crystal Structure of an Hsp90-Nucleotide-P23/Sba1 Closed Chaperone Complex Nature, 440, 2006
2CH4	Complex between Bacterial Chemotaxis histidine kinase CheA domains P4 and P5 and receptor-adaptor protein CheW 分子名称: CHEMOTAXIS PROTEIN CHEA, CHEMOTAXIS PROTEIN CHEW, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER 著者 Park, S.Y, Bilwes, A.M, Crane, B.R. 登録日 2006-03-10 公開日 2006-04-18 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Reconstruction of the Chemotaxis Receptor-Kinase Assembly Nat.Struct.Mol.Biol., 13, 2006
4PRX	E. coli GyrB 43-kDa N-terminal fragment in complex with ADP+Pi 分子名称: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, GyrB, ... 著者 Stanger, F.V, Schirmer, T. 登録日 2014-03-06 公開日 2014-09-24 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structure of the N-Terminal Gyrase B Fragment in Complex with ADPPi Reveals Rigid-Body Motion Induced by ATP Hydrolysis Plos One, 9, 2014
4PU9	E. coli GyrB 43-kDa N-terminal fragment in complex with ADP-BeF3 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, GyrB, ... 著者 Stanger, F.V, Schirmer, T. 登録日 2014-03-12 公開日 2014-09-24 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structure of the N-Terminal Gyrase B Fragment in Complex with ADPPi Reveals Rigid-Body Motion Induced by ATP Hydrolysis Plos One, 9, 2014
4PRV	E. coli GyrB 43-kDa N-terminal fragment in complex with ADP 分子名称: ADENOSINE-5'-DIPHOSPHATE, GyrB, MAGNESIUM ION 著者 Stanger, F.V, Schirmer, T. 登録日 2014-03-06 公開日 2014-09-24 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structure of the N-Terminal Gyrase B Fragment in Complex with ADPPi Reveals Rigid-Body Motion Induced by ATP Hydrolysis Plos One, 9, 2014
4Q20	Crystal structure of a C-terminal part of tyrosine kinase (DivL) from Caulobacter crescentus CB15 at 2.50 A resolution (PSI Community Target, Shapiro) 分子名称: Sensor protein DivL 著者 Joint Center for Structural Genomics (JCSG) 登録日 2014-04-04 公開日 2014-04-23 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Cell fate regulation governed by a repurposed bacterial histidine kinase. Plos Biol., 12, 2014
4R1F	Re-refined Human DNA topoisomerase IIa (ATPase and transducer domains) in complex with ADP and SO4 分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA topoisomerase 2-alpha, GLYCEROL, ... 著者 Stanger, F.V, Schirmer, T. 登録日 2014-08-05 公開日 2014-09-24 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.51 Å) 主引用文献 Structure of the N-Terminal Gyrase B Fragment in Complex with ADPPi Reveals Rigid-Body Motion Induced by ATP Hydrolysis Plos One, 9, 2014
6RFV	Revisiting pH-gated conformational switch. Complex HK853-RR468 pH 7 分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Response regulator, ... 著者 Mideros-Mora, C, Casino, P, Marina, A. 登録日 2019-04-16 公開日 2020-02-19 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.83 Å) 主引用文献 Revisiting the pH-gated conformational switch on the activities of HisKA-family histidine kinases. Nat Commun, 11, 2020
6RKW	CryoEM structure of the complete E. coli DNA Gyrase complex bound to a 130 bp DNA duplex 分子名称: (3~{R})-3-[[4-(3,4-dihydro-2~{H}-pyrano[2,3-c]pyridin-6-ylmethylamino)piperidin-1-yl]methyl]-1,4,7-triazatricyclo[6.3.1.0^{4,12}]dodeca-6,8(12),9-triene-5,11-dione, DNA (58-MER), DNA (62-MER), ... 著者 Vanden Broeck, A, Lamour, V. 登録日 2019-04-30 公開日 2019-11-06 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (6.6 Å) 主引用文献 Cryo-EM structure of the complete E. coli DNA gyrase nucleoprotein complex. Nat Commun, 10, 2019
6RKS	E. coli DNA Gyrase - DNA binding and cleavage domain in State 1 without TOPRIM insertion 分子名称: (3~{R})-3-[[4-(3,4-dihydro-2~{H}-pyrano[2,3-c]pyridin-6-ylmethylamino)piperidin-1-yl]methyl]-1,4,7-triazatricyclo[6.3.1.0^{4,12}]dodeca-6,8(12),9-triene-5,11-dione, DNA Strand 1, DNA Strand 2, ... 著者 Vanden Broeck, A, Lamour, V. 登録日 2019-04-30 公開日 2019-11-06 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Cryo-EM structure of the complete E. coli DNA gyrase nucleoprotein complex. Nat Commun, 10, 2019
6S1K	E. coli Core Signaling Unit, carrying QQQQ receptor mutation 分子名称: CheW, Chemotaxis protein CheA, Methyl-accepting chemotaxis protein I 著者 Cassidy, C.K. 登録日 2019-06-18 公開日 2020-01-22 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (8.38 Å) 主引用文献 Structure and dynamics of the E. coli chemotaxis core signaling complex by cryo-electron tomography and molecular simulations. Commun Biol, 3, 2020
6RH2	Revisiting pH-gated conformational switch. Complex HK853-RR468 D53A pH 5.3 分子名称: ADENOSINE-5'-DIPHOSPHATE, Response regulator, SULFATE ION, ... 著者 Mideros-Mora, C, Casino, P, Marina, A. 登録日 2019-04-18 公開日 2020-02-19 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Revisiting the pH-gated conformational switch on the activities of HisKA-family histidine kinases. Nat Commun, 11, 2020
6RH7	Revisiting pH-gated conformational switch. Complex HK853 mutant H260A -RR468 mutant D53A pH 7.5 分子名称: ADENOSINE-5'-DIPHOSPHATE, Response regulator, SULFATE ION, ... 著者 Mideros-Mora, C, Casino, P, Marina, A. 登録日 2019-04-18 公開日 2020-02-19 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Revisiting the pH-gated conformational switch on the activities of HisKA-family histidine kinases. Nat Commun, 11, 2020
6RH1	Revisiting pH-gated conformational switch. Complex HK853-RR468 D53A pH 7 分子名称: ADENOSINE-5'-DIPHOSPHATE, Response regulator, SULFATE ION, ... 著者 Mideros-Mora, C, Casino, P, Marina, A. 登録日 2019-04-18 公開日 2020-02-19 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Revisiting the pH-gated conformational switch on the activities of HisKA-family histidine kinases. Nat Commun, 11, 2020
6RH0	Revisiting pH-gated conformational switch. Complex HK853-RR468 pH 5.5 分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Response regulator, ... 著者 Mideros-Mora, C, Casino, P, Marina, A. 登録日 2019-04-18 公開日 2020-02-19 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.87 Å) 主引用文献 Revisiting the pH-gated conformational switch on the activities of HisKA-family histidine kinases. Nat Commun, 11, 2020
6RKV	E. coli DNA Gyrase - DNA binding and cleavage domain in State 2 分子名称: DNA Strand 1, DNA Strand 2, DNA gyrase subunit A, ... 著者 Vanden Broeck, A, Lamour, V. 登録日 2019-04-30 公開日 2019-11-06 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (4.6 Å) 主引用文献 Cryo-EM structure of the complete E. coli DNA gyrase nucleoprotein complex. Nat Commun, 10, 2019
6RKU	E. coli DNA Gyrase - DNA binding and cleavage domain in State 1 分子名称: (3~{R})-3-[[4-(3,4-dihydro-2~{H}-pyrano[2,3-c]pyridin-6-ylmethylamino)piperidin-1-yl]methyl]-1,4,7-triazatricyclo[6.3.1.0^{4,12}]dodeca-6,8(12),9-triene-5,11-dione, DNA Strand 1, DNA Strand 2, ... 著者 Vanden Broeck, A, Lamour, V. 登録日 2019-04-30 公開日 2019-11-06 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Cryo-EM structure of the complete E. coli DNA gyrase nucleoprotein complex. Nat Commun, 10, 2019
8C5V	Chemotaxis core signalling unit from E protein lysed E. coli cells 分子名称: Chemotaxis protein CheA, Chemotaxis protein CheW, Methyl-accepting chemotaxis protein I 著者 Cassidy, C.K, Qin, Z, Zhang, P. 登録日 2023-01-10 公開日 2023-09-13 最終更新日 2023-11-29 実験手法 ELECTRON MICROSCOPY (12 Å) 主引用文献 Structure of the native chemotaxis core signaling unit from phage E-protein lysed E. coli cells. Mbio, 14, 2023
3CRL	Crystal structure of the PDHK2-L2 complex. 分子名称: Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial, MAGNESIUM ION, ... 著者 Popov, K.M, Luo, M, Green, T.J, Grigorian, A, Klyuyeva, A, Tuganova, A. 登録日 2008-04-07 公開日 2008-04-29 最終更新日 2017-10-25 実験手法 X-RAY DIFFRACTION (2.61 Å) 主引用文献 Structural and functional insights into the molecular mechanisms responsible for the regulation of pyruvate dehydrogenase kinase 2. J.Biol.Chem., 283, 2008
3CRK	Crystal structure of the PDHK2-L2 complex. 分子名称: Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial, POTASSIUM ION, ... 著者 Green, T.J, Popov, K.M, Luo, M, Grigorian, A, Klyuyeva, A, Tuganova, A. 登録日 2008-04-07 公開日 2008-04-29 最終更新日 2017-10-25 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural and functional insights into the molecular mechanisms responsible for the regulation of pyruvate dehydrogenase kinase 2. J.Biol.Chem., 283, 2008

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