PDB: 10530 件ウェブページステータス検索Chemie searchBIRD

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2FOA	Structure of porcine pancreatic elastase in 40/50/10 % benzene 分子名称: CALCIUM ION, ISOPROPYL ALCOHOL, SULFATE ION, ... 著者 Mattos, C, Bellamacina, C.R, Peisach, E, Pereira, A, Vitkup, D, Petsko, G.A, Ringe, D. 登録日 2006-01-13 公開日 2006-04-18 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Multiple solvent crystal structures: Probing binding sites, plasticity and hydration J.Mol.Biol., 357, 2006
3V3R	Crystal Structure of GES-11 分子名称: Extended spectrum class A beta-lactamase GES-11, IODIDE ION, SODIUM ION 著者 Delbruck, H, Hoffmann, K.M.V, Bebrone, C. 登録日 2011-12-14 公開日 2012-09-26 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.898 Å) 主引用文献 Kinetic and crystallographic studies of extended-spectrum GES-11, GES-12, and GES-14 beta-lactamases. Antimicrob.Agents Chemother., 56, 2012
4O76	Crystal structure of the first bromodomain of human BRD4 in complex with TG101209 分子名称: 1,2-ETHANEDIOL, Bromodomain-containing protein 4, N-tert-butyl-3-[(5-methyl-2-{[4-(4-methylpiperazin-1-yl)phenyl]amino}pyrimidin-4-yl)amino]benzenesulfonamide 著者 Zhu, J.-Y, Ember, S.W, Watts, C, Schonbrunn, E. 登録日 2013-12-24 公開日 2014-03-05 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Acetyl-lysine Binding Site of Bromodomain-Containing Protein 4 (BRD4) Interacts with Diverse Kinase Inhibitors. Acs Chem.Biol., 9, 2014
3UQ8	Structure of adenylation domain of Haemophilus influenzae DNA ligases bound to NAD+ in adenylated state. 分子名称: ADENOSINE MONOPHOSPHATE, DNA ligase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE 著者 Lahiri, S.D. 登録日 2011-11-19 公開日 2012-01-25 最終更新日 2014-11-12 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structure Guided Understanding of NAD(+) Recognition in Bacterial DNA Ligases. Acs Chem.Biol., 7, 2012
6LFX	Crystal structure of PCB4scFv(hN56D) in complex with PCB#77 分子名称: 1,2-bis(chloranyl)-4-(3-chloranyl-4-methoxy-phenyl)benzene, PCB4scFv(hN56D) 著者 Nakamura, T, Yamagata, Y, Morioka, H. 登録日 2019-12-03 公開日 2020-12-09 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.43 Å) 主引用文献 Crystal structure of PCB4scFv(hN56D) in complex with PCB#77 To Be Published
4OBD	Crystal Structure of Nelfinavir-Resistant, Inactive HIV-1 Protease (D30N/N88D) in Complex with the p1-p6 substrate variant (L449F/S451N) 分子名称: 1,2-ETHANEDIOL, GLYCEROL, HIV-1 Protease, ... 著者 Kolli, M. 登録日 2014-01-07 公開日 2014-11-26 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 HIV-1 protease-substrate coevolution in nelfinavir resistance. J.Virol., 88, 2014
6LH8	Structure of aerolysin-like protein (Bombina maxima) 分子名称: aerolysin-like protein 著者 Bian, X.L, Wang, Q.Q, Li, X, Teng, M.Q, Zhang, Y. 登録日 2019-12-07 公開日 2020-06-10 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.729 Å) 主引用文献 A cellular endolysosome-modulating pore-forming protein from a toad is negatively regulated by its paralog under oxidizing conditions. J.Biol.Chem., 295, 2020
4OBK	Crystal structure of inactive HIV-1 protease in complex with the P1-P6 substrate variant (L449F/S451N) 分子名称: 1,2-ETHANEDIOL, ACETATE ION, GLYCEROL, ... 著者 Kolli, M. 登録日 2014-01-07 公開日 2014-11-26 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 HIV-1 protease-substrate coevolution in nelfinavir resistance. J.Virol., 88, 2014
5KO9	Crystal Structure of the SRAP Domain of Human HMCES Protein 分子名称: Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein, UNKNOWN ATOM OR ION 著者 Halabelian, L, Li, Y, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Structural Genomics Consortium (SGC) 登録日 2016-06-29 公開日 2016-08-24 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structural basis of HMCES interactions with abasic DNA and multivalent substrate recognition. Nat.Struct.Mol.Biol., 26, 2019
4ZH3	Crystal structure of Escherichia coli RNA polymerase in complex with CBRH16-Br 分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... 著者 Feng, Y, Ebright, R.H. 登録日 2015-04-24 公開日 2015-08-05 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (4.082 Å) 主引用文献 Structural Basis of Transcription Inhibition by CBR Hydroxamidines and CBR Pyrazoles. Structure, 23, 2015
6LAN	Structure of CCDC50 and LC3B complex 分子名称: Coiled-coil domain-containing protein 50,Microtubule-associated proteins 1A/1B light chain 3B 著者 Liu, L, Li, J, Hou, P. 登録日 2019-11-12 公開日 2020-09-30 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.41 Å) 主引用文献 A novel selective autophagy receptor, CCDC50, delivers K63 polyubiquitination-activated RIG-I/MDA5 for degradation during viral infection. Cell Res., 31, 2021
6LHZ	Structure of aerolysin-like protein (Bombina maxima) 分子名称: aerolysin-like protein 著者 Bian, X.L, Wang, Q.Q, Li, X, Teng, M.Q, Zhang, Y. 登録日 2019-12-10 公開日 2020-06-10 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.52 Å) 主引用文献 A cellular endolysosome-modulating pore-forming protein from a toad is negatively regulated by its paralog under oxidizing conditions. J.Biol.Chem., 295, 2020
6LFW	Crystal structure of PCB4scFv(hN56D) in complex with PCB#126 分子名称: 1,2,3-tris(chloranyl)-5-(3-chloranyl-4-methoxy-phenyl)benzene, PCB4scFv(hN56D), SODIUM ION 著者 Nakamura, T, Yamagata, Y, Morioka, H. 登録日 2019-12-03 公開日 2020-12-09 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.41 Å) 主引用文献 Crystal structure of PCB4scFv(hN56D) in complex with PCB#126 To Be Published
184L	SPECIFICITY OF LIGAND BINDING IN A BURIED NON-POLAR CAVITY OF T4 LYSOZYME: LINKAGE OF DYNAMICS AND STRUCTURAL PLASTICITY 分子名称: 2-HYDROXYETHYL DISULFIDE, CHLORIDE ION, ISOBUTYLBENZENE, ... 著者 Morton, A, Matthews, B.W. 登録日 1995-04-19 公開日 1995-07-10 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Specificity of ligand binding in a buried nonpolar cavity of T4 lysozyme: linkage of dynamics and structural plasticity. Biochemistry, 34, 1995
3VFK	The structure of monodechloro-teicoplanin in complex with its ligand, using ubiquitin as a ligand carrier 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-amino-2-deoxy-beta-D-glucopyranose, 8-METHYLNONANOIC ACID, ... 著者 Economou, N.J, Weeks, S.D, Grasty, K.C, Loll, P.J. 登録日 2012-01-09 公開日 2013-01-09 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structure of the complex between teicoplanin and a bacterial cell-wall peptide: use of a carrier-protein approach. Acta Crystallogr.,Sect.D, 69, 2013
4OGJ	Crystal Structure of the first bromodomain of human BRD4 in complex with the inhibitor TG-101348 分子名称: 1,2-ETHANEDIOL, Bromodomain-containing protein 4, N-tert-butyl-3-{[5-methyl-2-({4-[2-(pyrrolidin-1-yl)ethoxy]phenyl}amino)pyrimidin-4-yl]amino}benzenesulfonamide 著者 Filippakopoulos, P, Picaud, S, Jose, B, Martin, S, Fedorov, O, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC) 登録日 2014-01-16 公開日 2014-02-26 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Dual kinase-bromodomain inhibitors for rationally designed polypharmacology. Nat.Chem.Biol., 10, 2014
6L1B	Crystal Structure of P450BM3 with N-(3-cyclopentylpropanoyl)-L-pipecolyl-L-phenylalanine 分子名称: (2S)-2-[[(2S)-1-(3-cyclopentylpropanoyl)piperidin-2-yl]carbonylamino]-3-phenyl-propanoic acid, Bifunctional cytochrome P450/NADPH--P450 reductase, DIMETHYL SULFOXIDE, ... 著者 Shoji, O, Yonemura, K. 登録日 2019-09-28 公開日 2020-09-30 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.74 Å) 主引用文献 Systematic Evolution of Decoy Molecules for the Highly Efficient Hydroxylation of Benzene and Small Alkanes Catalyzed by Wild-Type Cytochrome P450BM3 Acs Catalysis, 10, 2020
4ZPE	BACE1 in complex with 4-(cyclohexylamino)-1-(3-fluorophenyl)-8-(3-isopropoxybenzyl)-1,3,8-triazaspiro[4.5]dec-3-en-2-one 分子名称: 4-(cyclohexylamino)-1-(3-fluorophenyl)-8-[3-(propan-2-yloxy)benzyl]-1,3,8-triazaspiro[4.5]dec-3-en-2-one, Beta-secretase 1 著者 Orth, P. 登録日 2015-05-07 公開日 2015-08-05 最終更新日 2015-10-28 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Methyl-substitution of an iminohydantoin spiropiperidine beta-secretase (BACE-1) inhibitor has a profound effect on its potency. Bioorg.Med.Chem.Lett., 25, 2015
3VTW	Crystal structure of T7-tagged Optineurin LIR-fused human LC3B_2-119 分子名称: Optineurin, microtubule-associated proteins 1A/1B light chain 3B, SULFATE ION 著者 Suzuki, H, Kawasaki, M, Kato, R, Wakatsuki, S. 登録日 2012-06-08 公開日 2013-06-26 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.52 Å) 主引用文献 Structural basis for phosphorylation-triggered autophagic clearance of Salmonella Biochem.J., 454, 2013
4ZGY	STRUCTURE of HUMAN ORNITHINE DECARBOXYLASE IN COMPLEX WITH A C-TERMINAL FRAGMENT OF ANTIZYME 分子名称: MAGNESIUM ION, Ornithine decarboxylase, Ornithine decarboxylase antizyme 1, ... 著者 Wu, H.Y, Chan, N.L. 登録日 2015-04-24 公開日 2015-09-02 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.63 Å) 主引用文献 Structural basis of antizyme-mediated regulation of polyamine homeostasis Proc.Natl.Acad.Sci.USA, 112, 2015
4PS5	Crystal structure of the first bromodomain of human BRD4 in complex with TG101348 分子名称: 1,2-ETHANEDIOL, ACETATE ION, Bromodomain-containing protein 4, ... 著者 Ember, S.W, Zhu, J.-Y, Watts, C, Schonbrunn, E. 登録日 2014-03-06 公開日 2014-03-19 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Acetyl-lysine Binding Site of Bromodomain-Containing Protein 4 (BRD4) Interacts with Diverse Kinase Inhibitors. Acs Chem.Biol., 9, 2014
4P8O	S. aureus gyrase bound to an aminobenzimidazole urea inhibitor 分子名称: 1-ethyl-3-[5-(5-fluoropyridin-3-yl)-7-(pyrimidin-2-yl)-1H-benzimidazol-2-yl]urea, DNA gyrase subunit B 著者 Jacobs, M.D. 登録日 2014-03-31 公開日 2014-10-29 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Second-generation antibacterial benzimidazole ureas: discovery of a preclinical candidate with reduced metabolic liability. J.Med.Chem., 57, 2014
4PL5	Crystal structure of murine IRE1 in complex with OICR573 inhibitor 分子名称: 2,5,8,11,14,17,20,23,26,29,32,35,38,41,44,47,50,53,56,59,62,65,68,71,74,77,80-HEPTACOSAOXADOOCTACONTAN-82-OL, 3-methoxy-5-methyl-4'-(morpholin-4-yl)biphenyl-4-ol, ADENOSINE-5'-DIPHOSPHATE, ... 著者 Sanches, M, Duffy, N, Talukdar, M, Thevakumaran, N, Chiovitti, D, Al-awar, R, Patterson, J.B, Sicheri, F. 登録日 2014-05-16 公開日 2014-09-03 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Structure and mechanism of action of the hydroxy-aryl-aldehyde class of IRE1 endoribonuclease inhibitors. Nat Commun, 5, 2014
6LD3	Zika NS5 polymerase domain 分子名称: 2,4-dimethoxy-5-thiophen-2-yl-benzoic acid, RNA-directed RNA polymerase NS5, ZINC ION, ... 著者 El Sahili, A, Lescar, J. 登録日 2019-11-20 公開日 2020-08-19 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Non-nucleoside Inhibitors of Zika Virus RNA-Dependent RNA Polymerase. J.Virol., 94, 2020
1AAX	CRYSTAL STRUCTURE OF PROTEIN TYROSINE PHOSPHATASE 1B COMPLEXED WITH TWO BIS(PARA-PHOSPHOPHENYL)METHANE (BPPM) MOLECULES 分子名称: 4-PHOSPHONOOXY-PHENYL-METHYL-[4-PHOSPHONOOXY]BENZEN, MAGNESIUM ION, PROTEIN TYROSINE PHOSPHATASE 1B 著者 Puius, Y.A, Zhao, Y, Sullivan, M, Lawrence, D, Almo, S.C, Zhang, Z.-Y. 登録日 1997-01-16 公開日 1998-03-04 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Identification of a second aryl phosphate-binding site in protein-tyrosine phosphatase 1B: a paradigm for inhibitor design. Proc.Natl.Acad.Sci.USA, 94, 1997

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