Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1UZP
DownloadVisualize
BU of 1uzp by Molmil
Integrin binding cbEGF22-TB4-cbEGF33 fragment of human fibrillin-1, Sm bound form cbEGF23 domain only.
分子名称: FIBRILLIN-1, SAMARIUM (III) ION
著者Lee, S.S.J, Knott, V, Harlos, K, Handford, P.A, Stuart, D.I.
登録日2004-03-15
公開日2004-04-08
最終更新日2019-05-08
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Structure of the Integrin Binding Fragment from Fibrillin-1 Gives New Insights Into Microfibril Organization
Structure, 12, 2004
1UZK
DownloadVisualize
BU of 1uzk by Molmil
Integrin binding cbEGF22-TB4-cbEGF33 fragment of human fibrillin-1, Ca bound to cbEGF23 domain only
分子名称: CALCIUM ION, FIBRILLIN-1
著者Lee, S.S.J, Knott, V, Harlos, K, Handford, P.A, Stuart, D.I.
登録日2004-03-13
公開日2006-05-24
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Structure of the Integrin Binding Fragment from Fibrillin-1 Gives New Insights Into Microfibril Organization
Structure, 12, 2004
3AMD
DownloadVisualize
BU of 3amd by Molmil
Crystal structures of Thermotoga maritima Cel5A, apo form and tetramer/au
分子名称: Endoglucanase
著者Wu, T.H, Huang, C.H, Ko, T.P, Lai, H.L, Ma, Y, Cheng, Y.S, Liu, J.R, Guo, R.T.
登録日2010-08-19
公開日2011-08-10
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Diverse substrate recognition mechanism revealed by Thermotoga maritima Cel5A structures in complex with cellotetraose, cellobiose and mannotriose
Biochim.Biophys.Acta, 1814, 2011
1BHU
DownloadVisualize
BU of 1bhu by Molmil
THE 3D STRUCTURE OF THE STREPTOMYCES METALLOPROTEINASE INHIBITOR, SMPI, ISOLATED FROM STREPTOMYCES NIGRESCENS TK-23, NMR, MINIMIZED AVERAGE STRUCTURE
分子名称: METALLOPROTEINASE INHIBITOR
著者Tate, S, Ohno, A, Seeram, S.S, Hiraga, K, Oda, K, Kainosho, M.
登録日1998-06-10
公開日1999-01-06
最終更新日2022-02-16
実験手法SOLUTION NMR
主引用文献NMR structure of the Streptomyces metalloproteinase inhibitor, SMPI, isolated from Streptomyces nigrescens TK-23: another example of an ancestral beta gamma-crystallin precursor structure.
J.Mol.Biol., 282, 1998
1CS2
DownloadVisualize
BU of 1cs2 by Molmil
NMR STRUCTURES OF B-DNA D(CTACTGCTTTAG).D(CTAAAGCAGTAG)
分子名称: 5'-d(*CP*TP*AP*AP*AP*GP*CP*AP*GP*TP*AP*G)-3', 5'-d(*CP*TP*AP*CP*TP*GP*CP*TP*TP*TP*AP*G)-3'
著者Leporc, S, Mauffret, O, Tevanian, G, Lescot, E, Monnot, M, Fermandjian, S.
登録日1999-08-16
公開日1999-08-25
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献An NMR and molecular modelling analysis of d(CTACTGCTTTAG). d(CTAAAGCAGTAG) reveals that the particular behaviour of TpA steps is related to edge-to-edge contacts of their base-pairs in the major groove
Nucleic Acids Res., 27, 1999
1APJ
DownloadVisualize
BU of 1apj by Molmil
NMR STUDY OF THE TRANSFORMING GROWTH FACTOR BETA BINDING PROTEIN-LIKE DOMAIN (TB MODULE/8-CYS DOMAIN), NMR, 21 STRUCTURES
分子名称: FIBRILLIN
著者Yuan, X, Downing, A.K, Knott, V, Handford, P.A.
登録日1997-07-22
公開日1998-01-28
最終更新日2021-11-03
実験手法SOLUTION NMR
主引用文献Solution structure of the transforming growth factor beta-binding protein-like module, a domain associated with matrix fibrils.
EMBO J., 16, 1997
1BD8
DownloadVisualize
BU of 1bd8 by Molmil
STRUCTURE OF CDK INHIBITOR P19INK4D
分子名称: P19INK4D CDK4/6 INHIBITOR
著者Baumgartner, R, Fernandez-Catalan, C, Winoto, A, Huber, R, Engh, R, Holak, T.A.
登録日1998-05-12
公開日1998-10-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of human cyclin-dependent kinase inhibitor p19INK4d: comparison to known ankyrin-repeat-containing structures and implications for the dysfunction of tumor suppressor p16INK4a.
Structure, 6, 1998
6J2Y
DownloadVisualize
BU of 6j2y by Molmil
Solution structure of translationally controlled tumor protein from photosynthetic microalga Nannochloropsis oceanica
分子名称: NoTCTP
著者Yao, X, Feng, Y.
登録日2019-01-03
公開日2019-03-13
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of a unicellular microalgae-derived translationally controlled tumor protein revealed both conserved features and structural diversity.
Arch. Biochem. Biophys., 665, 2019
7SKC
DownloadVisualize
BU of 7skc by Molmil
Solution structure of spider toxin Ssp1a
分子名称: Ssp1a toxin
著者Wilson, D.T, Daly, N.L, Dongol, Y, Lewis, R.J.
登録日2021-10-20
公開日2022-02-02
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Voltage-Gated Sodium Channel Modulation by a New Spider Toxin Ssp1a Isolated From an Australian Theraphosid.
Front Pharmacol, 12, 2021
3NOT
DownloadVisualize
BU of 3not by Molmil
Light-induced intermediate structure L2 of P. aeruginosa bacteriophytochrome
分子名称: BILIVERDINE IX ALPHA, Bacteriophytochrome
著者Yang, X, Ren, Z, Moffat, K.
登録日2010-06-25
公開日2012-11-28
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Temperature-scan cryocrystallography reveals reaction intermediates in bacteriophytochrome.
Nature, 479, 2011
1IQO
DownloadVisualize
BU of 1iqo by Molmil
Solution structure of MTH1880 from methanobacterium thermoautotrophicum
分子名称: HYPOTHETICAL PROTEIN MTH1880
著者Lee, C.H, Shin, J, Bang, E, Jung, J.W, Yee, A, Arrowsmith, C.H, Lee, W.
登録日2001-07-23
公開日2002-07-24
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of a novel calcium binding protein, MTH1880, from Methanobacterium thermoautotrophicum.
Protein Sci., 13, 2004
6NOY
DownloadVisualize
BU of 6noy by Molmil
Structure of Cyanothece McdB
分子名称: Maintenance of carboxysome positioning B protein, Mcsb
著者Schumacher, M.A.
登録日2019-01-16
公開日2019-04-24
最終更新日2019-06-26
実験手法X-RAY DIFFRACTION (3.46 Å)
主引用文献Structures of maintenance of carboxysome distribution Walker-box McdA and McdB adaptor homologs.
Nucleic Acids Res., 47, 2019
6NOP
DownloadVisualize
BU of 6nop by Molmil
Structure of Cyanothece McdA(D38A)-ATP complex
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Cobyrinic acid ac-diamide synthase, MAGNESIUM ION
著者Schumacher, M.A.
登録日2019-01-16
公開日2019-04-24
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structures of maintenance of carboxysome distribution Walker-box McdA and McdB adaptor homologs.
Nucleic Acids Res., 47, 2019
6NOO
DownloadVisualize
BU of 6noo by Molmil
Structure of Cyanothece McdA-AMPPNP complex
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Maintenance of carboxysome positioning A protein, ...
著者Schumacher, M.A.
登録日2019-01-16
公開日2019-04-24
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structures of maintenance of carboxysome distribution Walker-box McdA and McdB adaptor homologs.
Nucleic Acids Res., 47, 2019
1EIW
DownloadVisualize
BU of 1eiw by Molmil
Solution structure of hypothetical protein MTH538 from Methanobacterium thermoautotrophicum
分子名称: HYPOTHETICAL PROTEIN MTH538
著者Cort, J.R, Arrowsmith, C.H, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG)
登録日2000-02-29
公開日2000-09-06
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure-based functional classification of hypothetical protein MTH538 from Methanobacterium thermoautotrophicum.
J.Mol.Biol., 302, 2000
1EIK
DownloadVisualize
BU of 1eik by Molmil
Solution Structure of RNA Polymerase Subunit RPB5 from Methanobacterium Thermoautotrophicum
分子名称: RNA POLYMERASE SUBUNIT RPB5
著者Yee, A, Booth, V, Dharamsi, A, Engel, A, Edwards, A.M, Arrowsmith, C.H, Northeast Structural Genomics Consortium (NESG)
登録日2000-02-25
公開日2000-06-21
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of the RNA polymerase subunit RPB5 from Methanobacterium thermoautotrophicum.
Proc.Natl.Acad.Sci.USA, 97, 2000
4FX8
DownloadVisualize
BU of 4fx8 by Molmil
Crystal structure of the mutant Q185A.R203A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor BMP
分子名称: 6-HYDROXYURIDINE-5'-PHOSPHATE, Orotidine 5'-phosphate decarboxylase, SULFATE ION
著者Fedorov, A.A, Fedorov, E.V, Desai, B, Gerlt, J.A, Almo, S.C.
登録日2012-07-02
公開日2013-06-19
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.9411 Å)
主引用文献Conformational changes in orotidine 5'-monophosphate decarboxylase: a structure-based explanation for how the 5'-phosphate group activates the enzyme.
Biochemistry, 51, 2012
3V1P
DownloadVisualize
BU of 3v1p by Molmil
Crystal structure of the mutant Q185A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with the inhibitor BMP
分子名称: 6-HYDROXYURIDINE-5'-PHOSPHATE, Orotidine 5'-phosphate decarboxylase, SULFATE ION
著者Fedorov, A.A, Fedorov, E.V, Desai, B, Gerlt, J.A, Almo, S.C.
登録日2011-12-09
公開日2012-11-21
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献Conformational changes in orotidine 5'-monophosphate decarboxylase: a structure-based explanation for how the 5'-phosphate group activates the enzyme.
Biochemistry, 51, 2012
7ZO5
DownloadVisualize
BU of 7zo5 by Molmil
L1 metallo-beta-lactamase in complex with a mecillinam degradation product
分子名称: (2~{R},4~{S})-2-[(1~{R})-2-(azepan-1-yl)-1-formamido-2-oxidanylidene-ethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, Metallo-beta-lactamase L1, SULFATE ION, ...
著者Hinchliffe, P, Spencer, J.
登録日2022-04-24
公開日2023-03-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Interactions of hydrolyzed beta-lactams with the L1 metallo-beta-lactamase: Crystallography supports stereoselective binding of cephem/carbapenem products.
J.Biol.Chem., 299, 2023
7ZO2
DownloadVisualize
BU of 7zo2 by Molmil
L1 metallo-beta-lactamase complex with hydrolysed doripenem
分子名称: (2~{S},3~{R},4~{S})-2-[(2~{S},3~{R})-1,3-bis(oxidanyl)-1-oxidanylidene-butan-2-yl]-3-methyl-4-[(3~{S},5~{S})-5-[(sulfamoylamino)methyl]pyrrolidin-3-yl]sulfanyl-3,4-dihydro-2~{H}-pyrrole-5-carboxylic acid, CHLORIDE ION, Metallo-beta-lactamase L1, ...
著者Hinchliffe, P, Spencer, J.
登録日2022-04-24
公開日2023-03-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Interactions of hydrolyzed beta-lactams with the L1 metallo-beta-lactamase: Crystallography supports stereoselective binding of cephem/carbapenem products.
J.Biol.Chem., 299, 2023
7ZO3
DownloadVisualize
BU of 7zo3 by Molmil
L1 metallo-beta-lactamase in complex with hydrolysed tebipenem
分子名称: (2S,3R,4S)-2-[(2S,3R)-1,3-bis(oxidanyl)-1-oxidanylidene-butan-2-yl]-4-[1-(4,5-dihydro-1,3-thiazol-2-yl)azetidin-3-yl]sulfanyl-3-methyl-3,4-dihydro-2H-pyrrole-5-carboxylic acid, Metallo-beta-lactamase L1, SULFATE ION, ...
著者Hinchliffe, P, Spencer, J.
登録日2022-04-24
公開日2023-03-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Interactions of hydrolyzed beta-lactams with the L1 metallo-beta-lactamase: Crystallography supports stereoselective binding of cephem/carbapenem products.
J.Biol.Chem., 299, 2023
7ZO4
DownloadVisualize
BU of 7zo4 by Molmil
L1 metallo-beta-lactamase in complex with hydrolysed panipenem
分子名称: (2R,4S)-2-[(2S,3R)-1,3-bis(oxidanyl)-1-oxidanylidene-butan-2-yl]-4-[(3S)-1-ethanimidoylpyrrolidin-3-yl]sulfanyl-3,4-dihydro-2H-pyrrole-5-carboxylic acid, Metallo-beta-lactamase L1, SODIUM ION, ...
著者Hinchliffe, P, Spencer, J.
登録日2022-04-24
公開日2023-03-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Interactions of hydrolyzed beta-lactams with the L1 metallo-beta-lactamase: Crystallography supports stereoselective binding of cephem/carbapenem products.
J.Biol.Chem., 299, 2023
7ZO6
DownloadVisualize
BU of 7zo6 by Molmil
L1 metallo-beta-lactamase in complex with hydrolysed cefoxitin
分子名称: (2~{R},5~{S})-5-(aminocarbonyloxymethyl)-2-[(1~{S})-1-methoxy-2-oxidanyl-2-oxidanylidene-1-(2-thiophen-2-ylethanoylamino)ethyl]-5,6-dihydro-2~{H}-1,3-thiazine-4-carboxylic acid, Metallo-beta-lactamase L1, SULFATE ION, ...
著者Hinchliffe, P, Spencer, J.
登録日2022-04-24
公開日2023-03-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Interactions of hydrolyzed beta-lactams with the L1 metallo-beta-lactamase: Crystallography supports stereoselective binding of cephem/carbapenem products.
J.Biol.Chem., 299, 2023
7ZO7
DownloadVisualize
BU of 7zo7 by Molmil
L1 metallo-beta-lactamase in complex with hydrolysed cefmetazole
分子名称: (2R,5R)-2-[(1S)-1-[2-(cyanomethylsulfanyl)ethanoylamino]-1-methoxy-2-oxidanyl-2-oxidanylidene-ethyl]-5-[(1-methyl-1,2,3,4-tetrazol-5-yl)sulfanylmethyl]-5,6-dihydro-2H-1,3-thiazine-4-carboxylic acid, Metallo-beta-lactamase L1, SULFATE ION, ...
著者Hinchliffe, P, Spencer, J.
登録日2022-04-24
公開日2023-03-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Interactions of hydrolyzed beta-lactams with the L1 metallo-beta-lactamase: Crystallography supports stereoselective binding of cephem/carbapenem products.
J.Biol.Chem., 299, 2023
4UQQ
DownloadVisualize
BU of 4uqq by Molmil
Electron density map of GluK2 desensitized state in complex with 2S,4R-4-methylglutamate
分子名称: GLUTAMATE RECEPTOR IONOTROPIC, KAINATE 2, GLUTAMIC ACID
著者Meyerson, J.R, Kumar, J, Chittori, S, Rao, P, Pierson, J, Bartesaghi, A, Mayer, M.L, Subramaniam, S.
登録日2014-06-24
公開日2014-08-13
最終更新日2017-08-02
実験手法ELECTRON MICROSCOPY (7.6 Å)
主引用文献Structural Mechanism of Glutamate Receptor Activation and Desensitization
Nature, 514, 2014

225399

件を2024-09-25に公開中

PDB statisticsPDBj update infoContact PDBjnumon