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8JG2
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Crystal structure of a biosynthetic thiolase from Megasphaera hexanoica soaked with hexanoyl-CoA
分子名称: ACETATE ION, Acetyl-CoA C-acetyltransferase, COENZYME A
著者Kim, E.-J, Seo, H, Kim, K.-J.
登録日2023-05-19
公開日2024-05-08
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Crystal structure of biosynthetic thiolase from Megasphaera hexanoica
To Be Published
8JF5
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BU of 8jf5 by Molmil
Crystal structure of Lysine Specific Demethylase 1 (LSD1) with TAS1440
分子名称: 4-[5-[(3~{R})-3-azanylpyrrolidin-1-yl]carbonyl-2-[2-fluoranyl-4-(2-methyl-2-oxidanyl-propyl)phenyl]phenyl]-2-fluoranyl-benzenecarbonitrile, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
著者Fukushima, H, Machida, T, Yamashita, S, Suzuki, T.
登録日2023-05-17
公開日2024-05-22
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献TAS1440, a histone H3 competitive LSD1 inhibitor, activates both TGF-beta and notch signaling pathways via INSM1 dissociation in neuroendocrine small cell lung cancer
To Be Published
8JE4
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BU of 8je4 by Molmil
Crystal structure of LimF prenyltransferase (H239G/W273T mutant) bound with the thiodiphosphate moiety of farnesyl S-thiolodiphosphate (FSPP)
分子名称: MAGNESIUM ION, TRIHYDROGEN THIODIPHOSPHATE, prenyltransferase, ...
著者Hamada, K, Oguni, A, Zhang, Y, Satake, M, Goto, Y, Suga, H, Ogata, K, Sengoku, T.
登録日2023-05-15
公開日2023-11-08
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Switching Prenyl Donor Specificities of Cyanobactin Prenyltransferases.
J.Am.Chem.Soc., 145, 2023
8JCD
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BU of 8jcd by Molmil
Human H2BFWTH100R nucleosome with 601 DNA
分子名称: DNA (147-MER), Histone H2A type 1-B/E, Histone H2B type W-T, ...
著者Ding, D.B, Ishibashi, T, Nguyen, T.T.
登録日2023-05-11
公開日2024-05-15
実験手法ELECTRON MICROSCOPY (3.14 Å)
主引用文献Human H2BFWTH100R nucleosome with 601 DNA
to be published
8JCC
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Human histone H2B variant H2BFWT Cryo-EM structure with 601 DNA sequence
分子名称: DNA (147-MER), Histone H2A type 1-B/E, Histone H2B type W-T, ...
著者Ding, D.B, Ishibashi, T.
登録日2023-05-10
公開日2024-05-15
実験手法ELECTRON MICROSCOPY (3.42 Å)
主引用文献Human histone H2B variant H2BFWT Cryo-EM structure with 601 DNA sequence
To Be Published
8JC4
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Crystal structure of the P450 BM3 heme domain mutant F87A-T268V in complex with Pyd-Pid-Phe and hydroxylamine
分子名称: 1-pyridin-4-ylpiperidine-4-carboxylic acid, Bifunctional cytochrome P450/NADPH--P450 reductase, HYDROXYAMINE, ...
著者Jiang, Y, Dong, S, Feng, Y, Cong, Z.
登録日2023-05-10
公開日2023-12-27
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献C(sp3)-H hydroxylation of Broad-Spectrum Alkanes Catalyzed by an Artificial P450 Peroxygenase Driven by omega-Pyridyl Fatty Acyl Amino Acids.
Mol Catal, 550, 2023
8JC3
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Crystal structure of the P450 BM3 heme domain mutant F87A-T268V in complex with Pyd-N-C4-Phe and hydroxylamine
分子名称: 4-(pyridin-4-ylamino)butanoic acid, Bifunctional cytochrome P450/NADPH--P450 reductase, HYDROXYAMINE, ...
著者Jiang, Y, Dong, S, Feng, Y, Cong, Z.
登録日2023-05-10
公開日2023-12-27
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献C(sp3)-H hydroxylation of Broad-Spectrum Alkanes Catalyzed by an Artificial P450 Peroxygenase Driven by omega-Pyridyl Fatty Acyl Amino Acids.
Mol Catal, 550, 2023
8JBX
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Human canonical 601 DNA nucleosome
分子名称: DNA (147-MER), Histone H2A type 1-B/E, Histone H2B type 1-C/E/F/G/I, ...
著者Ding, D.B, Ishibashi, T, Nguyen, T.T.
登録日2023-05-09
公開日2024-05-15
実験手法ELECTRON MICROSCOPY (3.35 Å)
主引用文献Human canonical 601 DNA nucleosome
to be published
8JA6
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Structure of the alginate epimerase/lyase complexed with tri-mannuronic acid
分子名称: ACETATE ION, CALCIUM ION, beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid, ...
著者Fujiwara, T.
登録日2023-05-05
公開日2024-05-08
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for the minimal bifunctional alginate epimerase AlgE3 from Azotobacter chroococcum.
Febs Lett., 2024
8J71
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Selenomethionine mutant (L601Sem/L654Sem) of SAND domain of protein SP140 with DNA
分子名称: DNA (5'-D(*GP*GP*GP*CP*GP*GP*CP*CP*GP*CP*CP*CP*T)-3'), Nuclear body protein SP140
著者Li, H.T, Liu, W.Q.
登録日2023-04-26
公開日2024-05-01
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Molecular basis for Speckled protein SP140 bivalent recognition of histone H3 and DNA
To Be Published
8J70
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Native SAND domain of protein SP140 with DNA
分子名称: DNA (5'-D(*GP*GP*GP*CP*GP*GP*CP*CP*GP*CP*CP*CP*T)-3'), Nuclear body protein SP140, selenourea
著者Li, H.T, Liu, W.Q.
登録日2023-04-26
公開日2024-05-01
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Molecular basis for Speckled protein SP140 bivalent recognition of histone H3 and DNA.
To Be Published
8J6T
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Cryo-EM structure of the double CAF-1 bound right-handed Di-tetrasome
分子名称: Chromatin assembly factor 1 subunit A, Chromatin assembly factor 1 subunit B, Histone H3.1, ...
著者Liu, C.P, Yu, Z.Y, Xu, R.M.
登録日2023-04-26
公開日2023-08-16
最終更新日2023-09-06
実験手法ELECTRON MICROSCOPY (6.6 Å)
主引用文献Structural insights into histone binding and nucleosome assembly by chromatin assembly factor-1.
Science, 381, 2023
8J6S
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Cryo-EM structure of the single CAF-1 bound right-handed Di-tetrasome
分子名称: Chromatin assembly factor 1 subunit A, Chromatin assembly factor 1 subunit B, Histone H3.1, ...
著者Liu, C.P, Yu, Z.Y, Xu, R.M.
登録日2023-04-26
公開日2023-08-16
最終更新日2023-09-06
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structural insights into histone binding and nucleosome assembly by chromatin assembly factor-1.
Science, 381, 2023
8J5M
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Structure of GH1 Br2 beta-glucosidase E350G mutant from bovine rumen metagenome
分子名称: ACETATE ION, Beta-glucosidase, SULFATE ION
著者Kaenying, W, Kongsaeree, P.T, Tagami, T.
登録日2023-04-23
公開日2023-11-22
最終更新日2024-01-03
実験手法X-RAY DIFFRACTION (1.621 Å)
主引用文献Structural and mutational analysis of glycoside hydrolase family 1 Br2 beta-glucosidase derived from bovine rumen metagenome.
Heliyon, 9, 2023
8J4L
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BU of 8j4l by Molmil
X-ray crystal structure of F46C myoglobin with a covalently linked triazole group
分子名称: 1H-1,2,3-triazole-5-thiol, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Yuan, H, Lin, Y.W.
登録日2023-04-20
公開日2024-05-01
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献X-ray crystal structure of F46C myoglobin with a covalently linked triazole group
To Be Published
8J24
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Cryo-EM structure of FFAR2 complex bound with acetic acid
分子名称: ACETATE ION, Free fatty acid receptor 2, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者Tai, L, Li, F, Tang, W, Sun, X, Wang, J.
登録日2023-04-14
公開日2024-01-24
最終更新日2024-04-10
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Molecular recognition and activation mechanism of short-chain fatty acid receptors FFAR2/3.
Cell Res., 34, 2024
8J0H
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BU of 8j0h by Molmil
Crystal structure of the fission yeast Rex1BD protein(C4H3.06)
分子名称: Uncharacterized protein C4H3.06
著者Li, J, Sun, W, Chen, Y.
登録日2023-04-11
公開日2023-11-01
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (3.383 Å)
主引用文献The SUN-family protein Sad1 mediates heterochromatin spatial organization through interaction with histone H2A-H2B.
Nat Commun, 15, 2024
8J07
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96nm repeat of human respiratory doublet microtubule and associated axonemal complexes
分子名称: ACTA2, Axonemal dynein light intermediate polypeptide 1, Calaxin, ...
著者Gui, M, Brown, A.
登録日2023-04-09
公開日2023-07-26
最終更新日2023-08-02
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Axonemal structures reveal mechanoregulatory and disease mechanisms.
Nature, 618, 2023
8IYJ
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Cryo-EM structure of the 48-nm repeat doublet microtubule from mouse sperm
分子名称: Cilia and flagella-associated protein 77, Cilia- and flagella-associated protein 107, Cilia- and flagella-associated protein 141, ...
著者Zhou, L.N, Gui, M, Wu, J.P.
登録日2023-04-05
公開日2023-07-05
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structures of sperm flagellar doublet microtubules expand the genetic spectrum of male infertility.
Cell, 186, 2023
8IYC
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Structure insight into substrate recognition and catalysis by feruloyl esterase from Aspergillus sydowii
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
著者Phienluphon, A, Kondo, K, Mikami, B, Nagata, T, Katahira, M.
登録日2023-04-04
公開日2023-10-25
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural insights into the molecular mechanisms of substrate recognition and hydrolysis by feruloyl esterase from Aspergillus sydowii.
Int.J.Biol.Macromol., 253, 2023
8IYB
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Structure insight into substrate recognition and catalysis by feruloyl esterase from Aspergillus sydowii
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID, ...
著者Phienluphon, A, Kondo, K, Mikami, B, Nagata, T, Katahira, M.
登録日2023-04-04
公開日2023-10-25
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural insights into the molecular mechanisms of substrate recognition and hydrolysis by feruloyl esterase from Aspergillus sydowii.
Int.J.Biol.Macromol., 253, 2023
8IYA
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Complex of SETDB1-derived peptide bound to UBE2E1
分子名称: Histone-lysine N-methyltransferase SETDB1, SULFATE ION, Ubiquitin-conjugating enzyme E2 E1
著者Du, Y.X, Liu, L.
登録日2023-04-04
公開日2024-01-03
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Complex of SETDB1-derived peptide bound to UBE2E1
To Be Published
8IY8
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Structure insight into substrate recognition and catalysis by feruloyl esterase from Aspergillus sydowii
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, Feruloyl esterase
著者Phienluphon, A, Kondo, K, Mikami, B, Nagata, T, Katahira, M.
登録日2023-04-04
公開日2023-10-25
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural insights into the molecular mechanisms of substrate recognition and hydrolysis by feruloyl esterase from Aspergillus sydowii.
Int.J.Biol.Macromol., 253, 2023
8ITV
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KL2.1 in complex with CRM1-Ran-RanBP1
分子名称: (3~{S},5~{R},6~{E},8~{Z},10~{R},12~{E},14~{E},16~{S})-3,16-bis(azanyl)-8,10,12-trimethyl-16-[(2~{S},4~{R},5~{S},6~{S})-5-methyl-4-oxidanyl-6-[(~{E})-prop-1-enyl]oxan-2-yl]-5-oxidanyl-hexadeca-6,8,12,14-tetraenoic acid, ACETATE ION, CHLORIDE ION, ...
著者Sun, Q, Jian, L.
登録日2023-03-23
公開日2024-03-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献KL2.1 in complex with CRM1-Ran-RanBP1
To Be Published
8IS4
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Structure of an Isocytosine specific deaminase Vcz in complexed with 5-FU
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5-FLUOROURACIL, GLYCEROL, ...
著者Guo, W.T, Li, X.J, Wu, B.X.
登録日2023-03-20
公開日2023-08-30
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural characterization of an isocytosine-specific deaminase VCZ reveals its application potential in the anti-cancer therapy.
Iscience, 26, 2023

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件を2024-06-12に公開中

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