PDB: 37932 件ウェブページステータス検索Chemie searchBIRD

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3BJE	Crystal structure of Trypanosoma brucei nucleoside phosphorylase shows uridine phosphorylase activity 分子名称: 1-O-phosphono-alpha-D-ribofuranose, CALCIUM ION, Nucleoside phosphorylase, ... 著者 Larson, E.T, Merritt, E.A, Structural Genomics of Pathogenic Protozoa Consortium (SGPP) 登録日 2007-12-03 公開日 2007-12-18 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.44 Å) 主引用文献 The Crystal Structure and Activity of a Putative Trypanosomal Nucleoside Phosphorylase Reveal It to be a Homodimeric Uridine Phosphorylase J.Mol.Biol., 396, 2010
6GFL	Crystal structure of the Escherichia coli nucleosidase PpnN (apo form) 分子名称: Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase 著者 Zhang, Y, Baerentsen, R.L, Gerdes, K, Brodersen, D.E. 登録日 2018-05-01 公開日 2019-04-24 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (2.48 Å) 主引用文献 (p)ppGpp Regulates a Bacterial Nucleosidase by an Allosteric Two-Domain Switch. Mol.Cell, 74, 2019
3BL6	Crystal structure of Staphylococcus aureus 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase in complex with formycin A 分子名称: (1S)-1-(7-amino-1H-pyrazolo[4,3-d]pyrimidin-3-yl)-1,4-anhydro-D-ribitol, 5'-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase 著者 Siu, K.K.W, Lee, J.E, Smith, G.D, Horvatin, C, Howell, P.L. 登録日 2007-12-10 公開日 2008-06-10 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structure of Staphylococcus aureus 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase Acta Crystallogr.,Sect.F, 64, 2008
3BGS	Structure of human purine nucleoside phosphorylase with L-DADMe-ImmH and phosphate 分子名称: 7-[[(3R,4R)-3-(hydroxymethyl)-4-oxidanyl-pyrrolidin-1-ium-1-yl]methyl]-3,5-dihydropyrrolo[3,2-d]pyrimidin-4-one, PHOSPHATE ION, purine nucleoside phosphorylase 著者 Murkin, A.S, Ramagopal, U.A, Almo, S.C, Schramm, V.L. 登録日 2007-11-27 公開日 2008-01-08 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.099 Å) 主引用文献 L-Enantiomers of transition state analogue inhibitors bound to human purine nucleoside phosphorylase J.Am.Chem.Soc., 130, 2008
8DB6	Adenosine/guanosine nucleoside hydrolase 分子名称: CALCIUM ION, GLYCEROL, Inosine-uridine preferring nucleoside hydrolase family protein 著者 Muellers, S.N, Allen, K.N, Stockman, B.J. 登録日 2022-06-14 公開日 2022-09-07 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.02 Å) 主引用文献 Structure-Guided Insight into the Specificity and Mechanism of a Parasitic Nucleoside Hydrolase. Biochemistry, 61, 2022
8DB8	Adenosine/guanosine nucleoside hydrolase bound to ImH 分子名称: 1,4-DIDEOXY-4-AZA-1-(S)-(9-DEAZAHYPOXANTHIN-9-YL)-D-RIBITOL, CALCIUM ION, Inosine-uridine preferring nucleoside hydrolase family protein 著者 Muellers, S.N, Allen, K.N, Stockman, B.J. 登録日 2022-06-14 公開日 2022-09-07 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.21 Å) 主引用文献 Structure-Guided Insight into the Specificity and Mechanism of a Parasitic Nucleoside Hydrolase. Biochemistry, 61, 2022
8DB7	Adenosine/guanosine nucleoside hydrolase bound to a fragment inhibitor 分子名称: CALCIUM ION, GLYCEROL, Inosine-uridine preferring nucleoside hydrolase family protein, ... 著者 Muellers, S.N, Allen, K.N, Stockman, B.J. 登録日 2022-06-14 公開日 2022-09-07 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.33 Å) 主引用文献 Structure-Guided Insight into the Specificity and Mechanism of a Parasitic Nucleoside Hydrolase. Biochemistry, 61, 2022
1ODI	Purine nucleoside phosphorylase from Thermus Thermophilus 分子名称: ADENOSINE, PURINE NUCLEOSIDE PHOSPHORYLASE, SULFATE ION 著者 Tahirov, T.H, Inagaki, E, Miyano, M. 登録日 2003-02-19 公開日 2003-02-27 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal Structure of Purine Nucleoside Phosphorylase from Thermus Thermophilus J.Mol.Biol., 337, 2004
1ODJ	PURINE NUCLEOSIDE PHOSPHORYLASE FROM THERMUS THERMOPHILUS 分子名称: GUANOSINE, PURINE NUCLEOSIDE PHOSPHORYLASE, SULFATE ION 著者 Tahirov, T.H, Inagaki, E, Miyano, M. 登録日 2003-02-19 公開日 2003-03-04 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal Structure of Purine Nucleoside Phosphorylase from Thermus Thermophilus J.Mol.Biol., 337, 2004
8DB9	Adenosine/guanosine nucleoside hydrolase bound to inhibitor 分子名称: 1-beta-D-ribofuranosyl-1H-1,2,4-triazole-3-carboximidamide, CALCIUM ION, Inosine-uridine preferring nucleoside hydrolase family protein 著者 Muellers, S.N, Allen, K.N, Stockman, B.J. 登録日 2022-06-14 公開日 2022-09-07 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.89 Å) 主引用文献 Structure-Guided Insight into the Specificity and Mechanism of a Parasitic Nucleoside Hydrolase. Biochemistry, 61, 2022
1ODL	PURINE NUCLEOSIDE PHOSPHORYLASE FROM THERMUS THERMOPHILUS 分子名称: CHLORIDE ION, GLYCEROL, PURINE NUCLEOSIDE PHOSPHORYLASE, ... 著者 Tahirov, T.H, Inagaki, E, Miyano, M. 登録日 2003-02-19 公開日 2003-02-27 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal Structure of Purine Nucleoside Phosphorylase from Thermus Thermophilus J.Mol.Biol., 337, 2004
1ODK	PURINE NUCLEOSIDE PHOSPHORYLASE FROM THERMUS THERMOPHILUS 分子名称: GLYCEROL, PURINE NUCLEOSIDE PHOSPHORYLASE 著者 Tahirov, T.H, Inagaki, E, Miyano, M. 登録日 2003-02-19 公開日 2003-02-27 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal Structure of Purine Nucleoside Phosphorylase from Thermus Thermophilus J.Mol.Biol., 337, 2004
6LYG	Cryo-EM structure of the calcium homeostasis modulator 1 channel 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Calcium homeostasis modulator 1 著者 Ren, Y, Yang, X, Shen, Y. 登録日 2020-02-14 公開日 2020-10-07 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Cryo-EM structure of the calcium homeostasis modulator 1 channel. Sci Adv, 6, 2020
1LWX	AZT DIPHOSPHATE BINDING TO NUCLEOSIDE DIPHOSPHATE KINASE 分子名称: 3'-AZIDO-3'-DEOXYTHYMIDINE-5'-DIPHOSPHATE, MAGNESIUM ION, NUCLEOSIDE DIPHOSPHATE KINASE 著者 Janin, J, Xu, Y. 登録日 1997-04-30 公開日 1997-08-20 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 X-ray analysis of azido-thymidine diphosphate binding to nucleoside diphosphate kinase. Proc.Natl.Acad.Sci.USA, 94, 1997
1NDC	X-RAY STRUCTURE OF NUCLEOSIDE DIPHOSPHATE KINASE COMPLEXED WITH DTDP AND MG2+ AT 2 A RESOLUTION 分子名称: MAGNESIUM ION, NUCLEOSIDE DIPHOSPHATE KINASE, THYMIDINE-5'-DIPHOSPHATE 著者 Cherfils, J, Morera, S, Janin, J. 登録日 1994-04-27 公開日 1994-06-22 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 X-ray structure of nucleoside diphosphate kinase complexed with thymidine diphosphate and Mg2+ at 2-A resolution. Biochemistry, 33, 1994
1NLK	CRYSTAL STRUCTURE OF MYXOCOCCUS XANTHUS NUCLEOSIDE DIPHOSPHATE KINASE AND ITS INTERACTION WITH A NUCLEOTIDE SUBSTRATE AT 2.0 ANGSTROMS RESOLUTION 分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, NUCLEOSIDE DIPHOSPHATE KINASE 著者 Williams, R.L. 登録日 1994-03-01 公開日 1994-05-31 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structure of Myxococcus xanthus nucleoside diphosphate kinase and its interaction with a nucleotide substrate at 2.0 A resolution. J.Mol.Biol., 234, 1993
1NDP	ADENOSINE 5'-DIPHOSPHATE BINDING AND THE ACTIVE SITE OF NUCLEOSIDE DIPHOSPHATE KINASE 分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, NUCLEOSIDE DIPHOSPHATE KINASE 著者 Janin, J, Morera, S, Dumas, C, Lascu, I, Lebras, G, Veron, M. 登録日 1993-11-29 公開日 1994-04-30 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Adenosine 5'-diphosphate binding and the active site of nucleoside diphosphate kinase. Biochemistry, 33, 1994
9FMD	Integrative model of the human post-catalytic spliceosome (P-complex) 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent RNA helicase DHX8, ... 著者 Rothe, P, Plaschka, C, Vorlaender, M.K. 登録日 2024-06-05 公開日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Mechanism for the initiation of spliceosome disassembly. Nature, 2024
1UCN	X-ray structure of human nucleoside diphosphate kinase A complexed with ADP at 2 A resolution 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, ... 著者 Chen, Y, Gallois-Montbrun, S, Schneider, B, Veron, M, Morera, S, Deville-Bonne, D, Janin, J. 登録日 2003-04-16 公開日 2003-09-30 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Nucleotide Binding to Nucleoside Diphosphate Kinases: X-ray Structure of Human NDPK-A in Complex with ADP and Comparison to Protein Kinases J.Mol.Biol., 332, 2003
1NHK	CRYSTAL STRUCTURE OF MYXOCOCCUS XANTHUS NUCLEOSIDE DIPHOSPHATE KINASE AND ITS INTERACTION WITH A NUCLEOTIDE SUBSTRATE AT 2.0 ANGSTROMS RESOLUTION 分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, NUCLEOSIDE DIPHOSPHATE KINASE 著者 Strelkov, S, Williams, R.L. 登録日 1994-12-09 公開日 1995-03-31 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 The 1.9 A crystal structure of a nucleoside diphosphate kinase complex with adenosine 3',5'-cyclic monophosphate: evidence for competitive inhibition. J.Mol.Biol., 249, 1995
1S59	Structure of nucleoside diphosphate kinase 2 with bound dGTP from Arabidopsis 分子名称: 2'-DEOXYGUANOSINE-5'-DIPHOSPHATE, 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, Nucleoside diphosphate kinase II 著者 Im, Y.J, Kim, J.-I, Shen, Y, Na, Y, Han, Y.-J, Kim, S.-H, Song, P.-S, Eom, S.H. 登録日 2004-01-20 公開日 2004-11-30 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structural analysis of Arabidopsis thaliana nucleoside diphosphate kinase-2 for phytochrome-mediated light signaling J.Mol.Biol., 343, 2004
5IU6	Crystal structure of E.coli purine nucleoside phosphorylase with 7-deazahypoxanthine 分子名称: 7H-pyrrolo[2,3-d]pyrimidin-4-ol, Purine nucleoside phosphorylase DeoD-type, SULFATE ION 著者 Timofeev, V.I, Abramchik, Y.A, Esipov, R.S, Kuranova, I.P. 登録日 2016-03-17 公開日 2017-04-05 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.51 Å) 主引用文献 Crystal structure of Escherichia coli purine nucleoside phosphorylase in complex with 7-deazahypoxanthine. Acta Crystallogr F Struct Biol Commun, 74, 2018
6FF7	human Bact spliceosome core structure 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, ADENOSINE-5'-DIPHOSPHATE, BUD13 homolog, ... 著者 Haselbach, D, Komarov, I, Agafonov, D, Hartmuth, K, Graf, B, Kastner, B, Luehrmann, R, Stark, H. 登録日 2018-01-03 公開日 2019-03-13 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 Structure and Conformational Dynamics of the Human Spliceosomal BactComplex. Cell, 172, 2018
6FF4	human Bact spliceosome core structure 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, BUD13 homolog, Cell division cycle 5-like protein, ... 著者 Haselbach, D, Komarov, I, Agafonov, D, Hartmuth, K, Graf, B, Kastner, B, Luehrmann, R, Stark, H. 登録日 2018-01-03 公開日 2018-08-29 最終更新日 2020-10-07 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structure and Conformational Dynamics of the Human Spliceosomal BactComplex. Cell, 172, 2018
5KO5	Crystal Structure of Isoform 2 of Purine Nucleoside Phosphorylase from Schistosoma mansoni in complex with cytosine 分子名称: 1,2-ETHANEDIOL, 6-AMINOPYRIMIDIN-2(1H)-ONE, Purine nucleoside phosphorylase 著者 Torini, J.R, Romanello, L, Bird, L, Owens, R, Brandao-Neto, J, Pereira, H.M. 登録日 2016-06-29 公開日 2017-08-09 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.36 Å) 主引用文献 The molecular structure of Schistosoma mansoni PNP isoform 2 provides insights into the nucleoside selectivity of PNPs. PLoS ONE, 13, 2018

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