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5YJL
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BU of 5yjl by Molmil
Crystal structure of Arabidopsis glutamyl-tRNA reductase in complex with NADPH and GBP
分子名称: Glutamyl-tRNA reductase 1, Glutamyl-tRNA reductase-binding protein, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Zhao, A, Han, F.
登録日2017-10-11
公開日2018-05-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of Arabidopsis thaliana glutamyl-tRNAGlureductase in complex with NADPH and glutamyl-tRNAGlureductase binding protein
Photosyn. Res., 137, 2018
7RNH
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BU of 7rnh by Molmil
Room temperature X-ray structure of SARS-CoV-2 main protease (Mpro) in complex with HL-3-45
分子名称: 3C-like proteinase, 6-[4-(4-chlorophenyl)piperazine-1-carbonyl]pyrimidine-2,4(1H,3H)-dione
著者Kovalevsky, A, Kneller, D.W, Coates, L.
登録日2021-07-29
公開日2021-11-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural, Electronic, and Electrostatic Determinants for Inhibitor Binding to Subsites S1 and S2 in SARS-CoV-2 Main Protease.
J.Med.Chem., 64, 2021
6XOZ
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BU of 6xoz by Molmil
Structure of human PYCR1 complexed with L-tetrahydro-2-furoic acid
分子名称: CHLORIDE ION, Pyrroline-5-carboxylate reductase 1, mitochondrial, ...
著者Tanner, J.J, Christensen, E.M.
登録日2020-07-07
公開日2020-11-04
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献In crystallo screening for proline analog inhibitors of the proline cycle enzyme PYCR1.
J.Biol.Chem., 295, 2020
8S9K
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BU of 8s9k by Molmil
Structure of dimeric FAM111A SPD S541A Mutant
分子名称: GLYCEROL, Serine protease FAM111A
著者Palani, S, Alvey, J.A, Cong, A.T.Q, Schellenberg, M.J, Machida, Y.
登録日2023-03-29
公開日2024-03-20
実験手法X-RAY DIFFRACTION (2.72 Å)
主引用文献Dimerization-dependent serine protease activity of FAM111A prevents replication fork stalling at topoisomerase 1 cleavage complexes.
Nat Commun, 15, 2024
6PBK
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BU of 6pbk by Molmil
Archaellum periplasmic stator protein complex FlaF and FlaG from Sulfolobus acidocaldarius
分子名称: 1,2-ETHANEDIOL, Conserved flagellar protein F, DI(HYDROXYETHYL)ETHER, ...
著者Tsai, C.-L, Tainer, J.A.
登録日2019-06-14
公開日2019-11-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.805 Å)
主引用文献The structure of the periplasmic FlaG-FlaF complex and its essential role for archaellar swimming motility.
Nat Microbiol, 5, 2020
9AV3
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BU of 9av3 by Molmil
Crystal structure of E. coli GuaB dCBS with inhibitor GNE2011
分子名称: 9-{(1R)-1-[(5P)-5-(4-chloro-1H-imidazol-2-yl)pyridin-3-yl]ethoxy}-1,4-dihydro-2H-pyrano[3,4-c]quinoline, INOSINIC ACID, Inosine-5'-monophosphate dehydrogenase
著者Harris, S.F, Wu, P.
登録日2024-03-01
公開日2025-01-15
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Discovery of GuaB inhibitors with efficacy against Acinetobacter baumannii infection.
Mbio, 15, 2024
6PF7
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BU of 6pf7 by Molmil
Crystal structure of TS-DHFR from Cryptosporidium hominis in complex with NADPH, FdUMP and 2-(4-((2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-5-yl)methyl)benzamido)benzoic acid
分子名称: 2-({4-[(2-amino-4-oxo-4,7-dihydro-1H-pyrrolo[2,3-d]pyrimidin-5-yl)methyl]benzene-1-carbonyl}amino)benzoic acid, 5-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE, Bifunctional dihydrofolate reductase-thymidylate synthase, ...
著者Czyzyk, D.J, Valhondo, M, Jorgensen, W.L, Anderson, K.S.
登録日2019-06-21
公開日2019-10-02
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.795 Å)
主引用文献Structure activity relationship towards design of cryptosporidium specific thymidylate synthase inhibitors.
Eur.J.Med.Chem., 183, 2019
4YRC
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BU of 4yrc by Molmil
Crystal structure of T. cruzi Histidyl-tRNA synthetase in complex with 2-aminoquinolin-8-ol (Chem 89)
分子名称: 1,2-ETHANEDIOL, 2-aminoquinolin-8-ol, DIMETHYL SULFOXIDE, ...
著者Koh, C.-Y, Hol, W.G.J.
登録日2015-03-15
公開日2015-08-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A binding hotspot in Trypanosoma cruzi histidyl-tRNA synthetase revealed by fragment-based crystallographic cocktail screens.
Acta Crystallogr. D Biol. Crystallogr., 71, 2015
5YQ5
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BU of 5yq5 by Molmil
Crystal structure of human osteomodulin
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Osteomodulin, PHOSPHATE ION
著者Caaveiro, J.M.M, Tashima, T, Tsumoto, K.
登録日2017-11-05
公開日2018-04-25
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Molecular basis for governing the morphology of type-I collagen fibrils by Osteomodulin.
Commun Biol, 1, 2018
9IR5
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BU of 9ir5 by Molmil
Crystal structure of apo-form UDP-N-acetylmuramic Acid L-alanine ligase (MurC) from Roseburia faecis
分子名称: 1,2-ETHANEDIOL, UDP-N-acetylmuramate--L-alanine ligase
著者Wang, Y.X, Du, Y.H.
登録日2024-07-14
公開日2025-04-09
最終更新日2025-06-11
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献Unusual MurC Ligase and Peptidoglycan Discovered in Lachnospiraceae Using a Fluorescent L-Amino Acid Based Selective Labeling Probe.
Angew.Chem.Int.Ed.Engl., 64, 2025
6PFB
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BU of 6pfb by Molmil
Crystal structure of TS-DHFR from Cryptosporidium hominis in complex with NADPH, FdUMP and 3-(2-(4-((2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-5-yl)methyl)benzamido)phenyl)propanoic acid.
分子名称: 3-[2-({4-[(2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-5-yl)methyl]benzene-1-carbonyl}amino)phenyl]propanoic acid, 5-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE, Bifunctional dihydrofolate reductase-thymidylate synthase, ...
著者Czyzyk, D.J, Valhondo, M, Jorgensen, W.L, Anderson, K.S.
登録日2019-06-21
公開日2019-10-02
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.089 Å)
主引用文献Structure activity relationship towards design of cryptosporidium specific thymidylate synthase inhibitors.
Eur.J.Med.Chem., 183, 2019
8PQ4
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BU of 8pq4 by Molmil
Structure of HosA transcriptional regulator from enteropathogenic Escherichia coli O127:H6 (strain E2348/69)
分子名称: 1,2-ETHANEDIOL, Transcriptional regulator HosA
著者Arpita, G, Kavyashree, M, Kannika, B.R, Madan Kumar, S.
登録日2023-07-10
公開日2023-07-19
最終更新日2025-01-29
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal structure of a MarR family transcriptional regulator protein
Biorxiv, 2024
8XGB
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BU of 8xgb by Molmil
Crystal structure of human secretory glutaminyl cyclase in complex with (S)-1-(1H-benzo[d]imidazol-5-yl)-5-(4-propoxyphenyl)imidazolidin-2-one
分子名称: (5~{S})-1-(3~{H}-benzimidazol-5-yl)-5-(4-propoxyphenyl)imidazolidin-2-one, Glutaminyl-peptide cyclotransferase, ZINC ION
著者Li, G.-B, Wang, X.-Y.
登録日2023-12-15
公開日2024-06-12
最終更新日2024-06-26
実験手法X-RAY DIFFRACTION (3.24 Å)
主引用文献X-ray Structure-Guided Discovery of a Potent Benzimidazole Glutaminyl Cyclase Inhibitor That Shows Activity in a Parkinson's Disease Mouse Model.
J.Med.Chem., 67, 2024
8S45
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BU of 8s45 by Molmil
CdaA-E05 complex
分子名称: (1~{R},2~{S},3~{S},4~{R},5~{S})-2-azanyl-4-phenylsulfanyl-6,8-dioxabicyclo[3.2.1]octan-3-ol, Diadenylate cyclase
著者Neumann, P, Ficner, R.
登録日2024-02-21
公開日2024-06-19
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献CdaA-E05 complex
To Be Published
8V99
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BU of 8v99 by Molmil
GII.26 Leon 4509 norovirus protruding domain
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Capsid protein VP1, ...
著者Kher, G, Reese, T, Pancera, M, Hansman, G.
登録日2023-12-07
公開日2024-06-19
最終更新日2024-07-31
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Development of a broad-spectrum therapeutic Fc-nanobody for human noroviruses.
J.Virol., 98, 2024
7T0V
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BU of 7t0v by Molmil
CryoEM structure of the crosslinked Rix7 AAA-ATPase
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Kocaman, S, Stanley, R.E, Lo, Y.H, Krahn, J, Dandey, V.P, Sobhany, M, Petrovich, M, Williams, J.G, Deterding, L.J, Borgnia, M.J, Etigunta, S.
登録日2021-11-30
公開日2022-03-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.67 Å)
主引用文献Communication network within the essential AAA-ATPase Rix7 drives ribosome assembly.
Pnas Nexus, 1, 2022
7SWL
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BU of 7swl by Molmil
CryoEM structure of the N-terminal-deleted Rix7 AAA-ATPase
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Kocaman, S, Stanley, R.E, Lo, Y.H, Krahn, J, Dandey, V.P, Sobhany, M, Petrovich, M, Williams, J.G, Deterding, L.J, Borgnia, M.J, Etigunta, S.
登録日2021-11-20
公開日2022-03-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.88 Å)
主引用文献Communication network within the essential AAA-ATPase Rix7 drives ribosome assembly.
Pnas Nexus, 1, 2022
7T3I
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BU of 7t3i by Molmil
CryoEM structure of the Rix7 D2 Walker B mutant
分子名称: ADENOSINE-5'-TRIPHOSPHATE, PHOSPHATE ION, Rix7, ...
著者Kocaman, S, Stanley, R.E.
登録日2021-12-08
公開日2022-03-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Communication network within the essential AAA-ATPase Rix7 drives ribosome assembly.
Pnas Nexus, 1, 2022
5YBY
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BU of 5yby by Molmil
Structure of human Gliomedin
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Liu, H, Lin, Z, Xu, F.
登録日2017-09-05
公開日2018-10-03
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.429 Å)
主引用文献High resolution structure of human gliomedin
To Be Published
366D
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BU of 366d by Molmil
1.3 A STRUCTURE DETERMINATION OF THE D(CG(5-BRU)ACG)2/6-BROMO-9-AMINO-DACA COMPLEX
分子名称: 6-BROMO-9-AMINO-N-ETHYL(DIAMINOMETHYL)ACRIDINE-4-CARBOXAMIDE, DNA (5'-D(*CP*GP*(BRU)P*AP*CP*G)-3')
著者Todd, A.K, Adams, A, Thorpe, J.H, Denny, W.A, Cardin, C.J.
登録日1997-12-19
公開日1999-04-06
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Major groove binding and 'DNA-induced' fit in the intercalation of a derivative of the mixed topoisomerase I/II poison N-(2-(dimethylamino)ethyl)acridine-4-carboxamide (DACA) into DNA: X-ray structure complexed to d(CG(5-BrU)ACG)2 at 1.3-A resolution.
J.Med.Chem., 42, 1999
9OJL
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BU of 9ojl by Molmil
Crystal Structure of GH18 Chitinase Domain from Vibrio splendidus
分子名称: 1,2-ETHANEDIOL, Chitinase, DI(HYDROXYETHYL)ETHER, ...
著者Horton, J.G, Jackson, C.J, Frkic, R.L.
登録日2025-05-08
公開日2025-05-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of GH18 Chitinase Domain from Vibrio splendidus
To Be Published
2GKD
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BU of 2gkd by Molmil
Structural insight into self-sacrifice mechanism of enediyne resistance
分子名称: 5'-D(*CP*TP*AP*TP*CP*AP*TP*AP*TP*GP*C)-3', 5'-D(*GP*CP*AP*TP*AP*TP*GP*AP*TP*AP*G)-3', CalC
著者Singh, S, Thorson, J.S.
登録日2006-04-01
公開日2006-08-22
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structural insight into the self-sacrifice mechanism of enediyne resistance.
Acs Chem.Biol., 1, 2006
6PDD
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BU of 6pdd by Molmil
Crystal structure of MYST acetyltransferase domain in complex with inhibitor 41
分子名称: 2-fluoro-3-methyl-N'-(phenylsulfonyl)-5-[(propan-2-yl)oxy]benzohydrazide, GLYCEROL, Histone acetyltransferase KAT8, ...
著者Hermans, S.J, Parker, M.W, Thomas, T, Baell, J.B.
登録日2019-06-18
公開日2020-04-01
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Discovery of Acylsulfonohydrazide-Derived Inhibitors of the Lysine Acetyltransferase, KAT6A, as Potent Senescence-Inducing Anti-Cancer Agents.
J.Med.Chem., 63, 2020
8S6R
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BU of 8s6r by Molmil
RosC-8.demethyl-8-amino-riboflavin complex
分子名称: 1-deoxy-1-[8-(dimethylamino)-7-methyl-2,4-dioxo-3,4-dihydrobenzo[g]pteridin-10(2H)-yl]-D-ribitol, GLYCEROL, Phosphoglycerate mutase
著者Ermler, U, Warkentin, E, Demmer, U, Mack, M.
登録日2024-02-28
公開日2025-03-12
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献The Phosphatase RosC from Streptomyces davaonensis is Used for Roseoflavin Biosynthesis and has Evolved to Largely Prevent Dephosphorylation of the Important Cofactor Riboflavin-5'-phosphate.
J.Mol.Biol., 436, 2024
8R06
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CRYSTAL STRUCTURE OF THERMOANAEROBACTERIUM XYLANOLYTICUM GH116 BETA-GLUCOSIDASE WITH A COVALENTLY BOUND CYCLOPHELLITOL AZIRIDINE
分子名称: (1~{R},2~{S},3~{S},4~{S},5~{R},6~{R})-5-azanyl-6-(hydroxymethyl)cyclohexane-1,2,3,4-tetrol, CALCIUM ION, CHLORIDE ION, ...
著者Offen, W.A, Davies, G.J, Breen, I.Z.
登録日2023-10-30
公開日2023-11-22
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献CRYSTAL STRUCTURE OF THERMOANAEROBACTERIUM XYLOLYTICUM GH116 BETA-GLUCOSIDASE WITH A COVALENTLY BOUND CYCLOPHELLITOL AZIRIDINE
JACS, 40, 2017

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