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8T48
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The N4BP1 CUE-like domain in complex with linear di-Ubiquitin
分子名称: Di-Ubiquitin, GLYCEROL, LITHIUM ION, ...
著者Schubert, A.F, Harris, S.F.
登録日2023-06-08
公開日2024-03-13
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献N4BP1 coordinates ubiquitin-dependent crosstalk within the I kappa B kinase family to limit Toll-like receptor signaling and inflammation.
Immunity, 57, 2024
6FMJ
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BU of 6fmj by Molmil
pVHL:EloB:EloC in complex with (2S,4R)-1-((S)-2-Acetamidopropanethioyl)-4-hydroxy-N-(4-(4-methylthiazol-5-yl) benzyl)pyrrolidine-2-carboxamide (ligand 3)
分子名称: (2~{S},4~{R})-1-[(2~{S})-2-acetamidopropanethioyl]-~{N}-[[4-(4-methyl-1,3-thiazol-5-yl)phenyl]methyl]-4-oxidanyl-pyrrolidine-2-carboxamide, Elongin-B, Elongin-C, ...
著者Soares, P, Lucas, X, Ciulli, A.
登録日2018-01-31
公開日2018-04-11
最終更新日2018-06-20
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Thioamide substitution to probe the hydroxyproline recognition of VHL ligands.
Bioorg. Med. Chem., 26, 2018
4LGX
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BU of 4lgx by Molmil
Structure of Chitinase D from Serratia proteamaculans revealed an unusually constrained substrate binding site
分子名称: ACETATE ION, GLYCEROL, Glycoside hydrolase family 18
著者Madhuprakash, J, Singh, A, Kumar, S, Sinha, M, Kaur, P, Sharma, S, Podile, A.R, Singh, T.P.
登録日2013-06-30
公開日2013-10-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Inverse relationship between chitobiase and transglycosylation activities of chitinase-D from Serratia proteamaculans revealed by mutational and biophysical analyses.
Sci Rep, 5, 2015
8TUX
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BU of 8tux by Molmil
Capsid of mature PP7 virion with 3'end region of PP7 genomic RNA
分子名称: 3'end of PP7 genomic RNA, Capsid protein, Maturation protein A
著者Thongchol, J, Zhang, J, Zeng, L.
登録日2023-08-17
公開日2024-03-13
最終更新日2024-04-17
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Removal of Pseudomonas type IV pili by a small RNA virus.
Science, 384, 2024
6FWZ
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Crystal structure of human UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase (DPAGT1) (V264G mutant) in complex with UDP-GlcNAc
分子名称: (2S)-3-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-2-[(6E)-HEXADEC-6-ENOYLOXY]PROPYL (8E)-OCTADEC-8-ENOATE, MAGNESIUM ION, UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase, ...
著者Pike, A.C.W, Dong, Y.Y, Chu, A, Tessitore, A, Goubin, S, Dong, L, Mukhopadhyay, S, Mahajan, P, Chalk, R, Berridge, G, Wang, D, Kupinska, K, Belaya, K, Beeson, D, Burgess-Brown, N, Edwards, A.M, Arrowsmith, C.H, Bountra, C, Carpenter, E.P, Structural Genomics Consortium (SGC)
登録日2018-03-07
公開日2018-07-25
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structures of DPAGT1 Explain Glycosylation Disease Mechanisms and Advance TB Antibiotic Design.
Cell, 175, 2018
7P6U
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BU of 7p6u by Molmil
Lon protease from Thermus Thermophilus
分子名称: (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK), Lon protease, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Coscia, F, Lowe, J.
登録日2021-07-18
公開日2021-10-27
最終更新日2021-11-17
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Cryo-EM structure of the full-length Lon protease from Thermus thermophilus.
Febs Lett., 595, 2021
8FRK
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Structure of nsp14 N7-MethylTransferase domain fused with TELSAM bound to SGC8158
分子名称: 5'-S-(4-{[(4'-chloro[1,1'-biphenyl]-3-yl)methyl]amino}butyl)-5'-thioadenosine, ETHANOL, POTASSIUM ION, ...
著者Kottur, J, Aggarwal, A.K.
登録日2023-01-07
公開日2023-07-26
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Structures of SARS-CoV-2 N7-methyltransferase with DOT1L and PRMT7 inhibitors provide a platform for new antivirals.
Plos Pathog., 19, 2023
6FX8
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BU of 6fx8 by Molmil
The X-ray structure of the ferritin nanocage containing Au and Pt, obtained upon encapsulation of a single heterobimetallic compound within the protein cage (rotating anode data)
分子名称: CADMIUM ION, CHLORIDE ION, Ferritin light chain, ...
著者Merlino, A, Ferraro, G.
登録日2018-03-08
公開日2018-05-16
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Caged noble metals: Encapsulation of a cytotoxic platinum(II)-gold(I) compound within the ferritin nanocage.
Int. J. Biol. Macromol., 115, 2018
7OLH
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BU of 7olh by Molmil
Bacillus subtilis Complex structure 1 of diadenylate cyclase CdaA cytoplasmic domain (CdaACD) and the phosphoglucomutase GlmM short variant (GlmMF369)
分子名称: Cyclic di-AMP synthase CdaA, Phosphoglucosamine mutase
著者Pathania, M, Grundling, A.G, Freemont, P.
登録日2021-05-20
公開日2021-10-27
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (3.65 Å)
主引用文献Structural basis for the inhibition of the Bacillus subtilis c-di-AMP cyclase CdaA by the phosphoglucomutase GlmM.
J.Biol.Chem., 297, 2021
8TJY
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BU of 8tjy by Molmil
Structure of Gabija AB complex
分子名称: Endonuclease GajA, Gabija protein GajB
著者Shen, Z.F, Yang, X.Y, Fu, T.M.
登録日2023-07-24
公開日2024-04-24
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.79 Å)
主引用文献Molecular basis of Gabija anti-phage supramolecular assemblies.
Nat.Struct.Mol.Biol., 2024
8T2N
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BU of 8t2n by Molmil
Crystal structure of GABARAP in complex with the LIR of NSs3
分子名称: Gamma-aminobutyric acid receptor-associated protein, Non-structural protein S
著者Ali, M.G.H, Wahba, H.M, Cyr, N, Omichinski, J.G.
登録日2023-06-06
公開日2024-04-03
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献An LIR motif in the Rift Valley fever virus NSs protein is critical for the interaction with LC3 family members and inhibition of autophagy.
Plos Pathog., 20, 2024
4LLG
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BU of 4llg by Molmil
Crystal Structure Analysis of the E.coli holoenzyme/Gp2 complex
分子名称: Bacterial RNA polymerase inhibitor, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Bae, B, Darst, S.A.
登録日2013-07-09
公開日2013-11-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.7936 Å)
主引用文献Phage T7 Gp2 inhibition of Escherichia coli RNA polymerase involves misappropriation of sigma 70 domain 1.1.
Proc.Natl.Acad.Sci.USA, 110, 2013
8FRJ
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BU of 8frj by Molmil
Structure of nsp14 N7-MethylTransferase domain fused with TELSAM bound to SGC0946
分子名称: 5-bromo-7-{5-[(3-{[(4-tert-butylphenyl)carbamoyl]amino}propyl)(propan-2-yl)amino]-5-deoxy-beta-D-ribofuranosyl}-7H-pyrrolo[2,3-d]pyrimidin-4-amine, Transcription factor ETV6,Guanine-N7 methyltransferase nsp14 chimera, ZINC ION
著者Kottur, J, Aggarwal, A.K.
登録日2023-01-07
公開日2023-07-26
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Structures of SARS-CoV-2 N7-methyltransferase with DOT1L and PRMT7 inhibitors provide a platform for new antivirals.
Plos Pathog., 19, 2023
8TL6
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BU of 8tl6 by Molmil
Cryo-EM structure of DDB1deltaB-DDA1-DCAF5
分子名称: DDB1- and CUL4-associated factor 5, DET1- and DDB1-associated protein 1, DNA damage-binding protein 1
著者Yue, H, Hunkeler, M, Roy Burman, S.S, Fischer, E.S.
登録日2023-07-26
公開日2024-04-03
最終更新日2024-04-17
実験手法ELECTRON MICROSCOPY (2.63 Å)
主引用文献Targeting DCAF5 suppresses SMARCB1-mutant cancer by stabilizing SWI/SNF.
Nature, 628, 2024
7OJS
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BU of 7ojs by Molmil
Complex structure 2 of the Bacillus subtilis CdaA c-di-AMP cyclase domain (CdaACD) and the phosphoglucomutase GlmM short variant (GlmMF369)
分子名称: Cyclic di-AMP synthase CdaA, Phosphoglucosamine mutase
著者Pathania, M, Grundling, A.G, Freemont, P.
登録日2021-05-17
公開日2021-10-27
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (4.2 Å)
主引用文献Structural basis for the inhibition of the Bacillus subtilis c-di-AMP cyclase CdaA by the phosphoglucomutase GlmM.
J.Biol.Chem., 297, 2021
7OK9
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BU of 7ok9 by Molmil
Crystal structure of Penicillin-Binding Protein 1 (PBP1) from Staphylococcus aureus in complex with pentaglycine
分子名称: CADMIUM ION, CHLORIDE ION, Penicillin-binding protein 1, ...
著者Martinez Caballero, S, Hermoso, J.A.
登録日2021-05-17
公開日2021-11-03
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.36 Å)
主引用文献Integrative structural biology of the penicillin-binding protein-1 from Staphylococcus aureus , an essential component of the divisome machinery.
Comput Struct Biotechnol J, 19, 2021
8TFF
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BU of 8tff by Molmil
PorX with BeF3 phosphate analog
分子名称: ACETATE ION, BERYLLIUM TRIFLUORIDE ION, CALCIUM ION, ...
著者Saran, A, Zeytuni, N.
登録日2023-07-11
公開日2024-04-17
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献PorX with BeF3 phosphate analog
To Be Published
8FJ4
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BU of 8fj4 by Molmil
LSD1-CoREST in complex with T108, short soaking
分子名称: 3-[(1R,2S)-2-(cyclobutylamino)cyclopropyl]-N-phenylbenzamide, Lysine-specific histone demethylase 1A, REST corepressor 1, ...
著者Caroli, J, Mattevi, A.
登録日2022-12-19
公開日2024-06-26
実験手法X-RAY DIFFRACTION (2.76 Å)
主引用文献Distal drug resistance mutations promote covalent inhibitor-adduct Grob fragmentation in LSD1
to be published
8FJ7
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BU of 8fj7 by Molmil
LSD1-CoREST in complex with T108 and SNAG peptide
分子名称: Lysine-specific histone demethylase 1A, REST corepressor 1, Zinc finger protein SNAI1, ...
著者Caroli, J, Mattevi, A.
登録日2022-12-19
公開日2024-06-26
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Distal drug resistance mutations promote covalent inhibitor-adduct Grob fragmentation in LSD1
to be published
8TO2
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BU of 8to2 by Molmil
Bottom cylinder of high-resolution phycobilisome quenched by OCP (local refinement)
分子名称: Allophycocyanin alpha chain, Allophycocyanin beta chain, Allophycocyanin subunit alpha-B, ...
著者Sauer, P.V, Sutter, M, Cupellini, L.
登録日2023-08-02
公開日2024-04-17
実験手法ELECTRON MICROSCOPY (2 Å)
主引用文献Structural and quantum chemical basis for OCP-mediated quenching of phycobilisomes.
Sci Adv, 10, 2024
4L4E
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BU of 4l4e by Molmil
Structure of cyanide and camphor bound P450cam mutant L358A/K178G
分子名称: CAMPHOR, CYANIDE ION, Camphor 5-monooxygenase, ...
著者Batabyal, D, Li, H, Poulos, T.L.
登録日2013-06-07
公開日2013-07-31
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.261 Å)
主引用文献Synergistic Effects of Mutations in Cytochrome P450cam Designed To Mimic CYP101D1.
Biochemistry, 52, 2013
4LLL
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BU of 4lll by Molmil
Crystal structure of S. aureus MepR-DNA complex
分子名称: MepR, Palindromized mepR operator sequence
著者Birukou, I, Brennan, R.G.
登録日2013-07-09
公開日2014-05-14
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.036 Å)
主引用文献Structural mechanism of transcription regulation of the Staphylococcus aureus multidrug efflux operon mepRA by the MarR family repressor MepR.
Nucleic Acids Res., 42, 2014
8TUW
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BU of 8tuw by Molmil
Type IV pilus from Pseudomonas PAO1 strain with PP7 Maturation protein
分子名称: Maturation protein A, Type IV major pilin protein PilA
著者Thongchol, J, Zhang, J, Zeng, L.
登録日2023-08-17
公開日2024-03-13
最終更新日2024-04-17
実験手法ELECTRON MICROSCOPY (7.9 Å)
主引用文献Removal of Pseudomonas type IV pili by a small RNA virus.
Science, 384, 2024
7OYK
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BU of 7oyk by Molmil
DNA-binding domain of CggR in complex with the DNA operator
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Central glycolytic genes regulator, ...
著者Novakova, M, Rezacova, P, Skerlova, J, Brynda, J.
登録日2021-06-24
公開日2021-11-10
最終更新日2021-11-24
実験手法X-RAY DIFFRACTION (2.101 Å)
主引用文献Structural insight into DNA recognition by bacterial transcriptional regulators of the SorC/DeoR family.
Acta Crystallogr D Struct Biol, 77, 2021
8TO5
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Central rod disk in C1 symmetry of high-resolution phycobilisome quenched by OCP (local refinement)
分子名称: C-phycocyanin alpha subunit, C-phycocyanin beta subunit, PHYCOCYANOBILIN, ...
著者Sauer, P.V, Sutter, M, Cupellini, L.
登録日2023-08-02
公開日2024-04-17
実験手法ELECTRON MICROSCOPY (1.87 Å)
主引用文献Structural and quantum chemical basis for OCP-mediated quenching of phycobilisomes.
Sci Adv, 10, 2024

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件を2024-08-21に公開中

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