Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7XIB
DownloadVisualize
BU of 7xib by Molmil
Cryo-EM structure of human DNMT1 (aa:351-1616) in complex with ubiquitinated H3 and hemimethylated DNA analog (CXXC-disordered form)
分子名称: DNA (5'-D(*AP*CP*TP*TP*AP*(5CM)P*GP*GP*AP*AP*GP*G)-3'), DNA (5'-D(*CP*CP*TP*TP*CP*(C55)P*GP*TP*AP*AP*GP*T)-3'), DNA (cytosine-5)-methyltransferase 1, ...
著者Onoda, H, Kikuchi, A, Kori, S, Yoshimi, S, Yamagata, A, Arita, K.
登録日2022-04-12
公開日2022-11-30
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (2.23 Å)
主引用文献Structural basis for activation of DNMT1.
Nat Commun, 13, 2022
2P02
DownloadVisualize
BU of 2p02 by Molmil
Crystal structure of the alpha subunit of human S-adenosylmethionine synthetase 2
分子名称: CHLORIDE ION, S-ADENOSYLMETHIONINE, S-adenosylmethionine synthetase isoform type-2
著者Papagrigoriou, E, Shafqat, N, Rojkova, A, Niessen, F.H, Kavanagh, K.L, von Delft, F, Gorrec, F, Ugochukwu, E, Arrowsmith, C.H, Edwards, A, Weigelt, J, Sundstrom, M, Oppermann, U, Structural Genomics Consortium (SGC)
登録日2007-02-28
公開日2007-03-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.21 Å)
主引用文献Crystal structure of the alpha subunit of human S-adenosylmethionine synthetase 2
To be Published
4HAV
DownloadVisualize
BU of 4hav by Molmil
Crystal structure of CRM1 inhibitor Anguinomycin A in complex with CRM1-Ran-RanBP1
分子名称: Anguinomycin A, bound form, CHLORIDE ION, ...
著者Sun, Q, Chook, Y.M.
登録日2012-09-27
公開日2013-01-09
最終更新日2017-07-26
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Nuclear export inhibition through covalent conjugation and hydrolysis of Leptomycin B by CRM1.
Proc.Natl.Acad.Sci.USA, 110, 2013
2PB7
DownloadVisualize
BU of 2pb7 by Molmil
Crystal Structure of the SRA domain of the human UHRF1 protein
分子名称: E3 ubiquitin-protein ligase UHRF1
著者Delagoutte, B, Birck, C, Samama, J.P.
登録日2007-03-28
公開日2008-04-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The mammalian SRA domain is a new nucleosome binding motif
To be Published
7W3D
DownloadVisualize
BU of 7w3d by Molmil
Crystal structure of BRD4 bromodomain 1 (BD1) in complex with N2-(1,2,3-benzotriazol-5-yl)-N3-(dimethylsulfamoyl)-N6-[(2S)-1-methoxypropan-2-yl]pyridine-2,3,6-triamine
分子名称: Bromodomain-containing protein 4, N2-(1,2,3-benzotriazol-5-yl)-N3-(dimethylsulfamoyl)-N6-[(2S)-1-methoxypropan-2-yl]pyridine-2,3,6-triamine
著者Park, T.H, Lee, B.I.
登録日2021-11-25
公開日2022-09-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Discovery of BET specific bromodomain inhibitors with a novel scaffold.
Bioorg.Med.Chem., 72, 2022
2OU7
DownloadVisualize
BU of 2ou7 by Molmil
Structure of the Catalytic Domain of Human Polo-like Kinase 1
分子名称: ACETATE ION, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Ding, Y.-H, Kothe, M, Kohls, D, Low, S.
登録日2007-02-09
公開日2007-04-24
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of the catalytic domain of human polo-like kinase 1.
Biochemistry, 46, 2007
7W3L
DownloadVisualize
BU of 7w3l by Molmil
Crystal structure of LSD1 in complex with cis-4-Br-2,5-F2-PCPA (S1024)
分子名称: 3-[4-bromanyl-2,5-bis(fluoranyl)phenyl]propanal, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
著者Niwa, H, Sato, S, Umehara, T.
登録日2021-11-25
公開日2022-09-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Structure-Activity Relationship and In Silico Evaluation of cis- and trans-PCPA-Derived Inhibitors of LSD1 and LSD2
Acs Med.Chem.Lett., 13, 2022
2OWB
DownloadVisualize
BU of 2owb by Molmil
Structure of the Catalytic Domain of Human Polo-like Kinase 1
分子名称: 4-(4-METHYLPIPERAZIN-1-YL)-N-[5-(2-THIENYLACETYL)-1,5-DIHYDROPYRROLO[3,4-C]PYRAZOL-3-YL]BENZAMIDE, ACETATE ION, Serine/threonine-protein kinase PLK1, ...
著者Ding, Y.-H, Kothe, M, Kohls, D, Low, S.
登録日2007-02-15
公開日2007-04-24
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of the catalytic domain of human polo-like kinase 1.
Biochemistry, 46, 2007
4JD2
DownloadVisualize
BU of 4jd2 by Molmil
Crystal structure of Bos taurus Arp2/3 complex binding with Mus musculus GMF
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Actin-related protein 2, Actin-related protein 2/3 complex subunit 1B, ...
著者Nolen, B.J, Luan, Q.
登録日2013-02-22
公開日2013-07-17
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.08 Å)
主引用文献Structural basis for regulation of Arp2/3 complex by GMF.
Nat.Struct.Mol.Biol., 20, 2013
4JBO
DownloadVisualize
BU of 4jbo by Molmil
Novel Aurora kinase inhibitors reveal mechanisms of HURP in nucleation of centrosomal and kinetochore microtubules
分子名称: 1-(4-{2-[(6-{4-[2-(dimethylamino)ethoxy]phenyl}furo[2,3-d]pyrimidin-4-yl)amino]ethyl}phenyl)-3-phenylurea, Aurora kinase A
著者Wu, J.S, Leou, J.S, Peng, Y.H, Hsueh, C.C, Hsieh, H.P, Wu, S.Y.
登録日2013-02-20
公開日2013-06-05
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.493 Å)
主引用文献Aurora kinase inhibitors reveal mechanisms of HURP in nucleation of centrosomal and kinetochore microtubules.
Proc.Natl.Acad.Sci.USA, 110, 2013
2PX6
DownloadVisualize
BU of 2px6 by Molmil
Crystal structure of the thioesterase domain of human fatty acid synthase inhibited by Orlistat
分子名称: (2S,3S,5S)-5-[(N-FORMYL-L-LEUCYL)OXY]-2-HEXYL-3-HYDROXYHEXADECANOIC ACID, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Thioesterase domain
著者Pemble IV, C.W, Johnson, L.C, Kridel, S.J, Lowther, W.T.
登録日2007-05-14
公開日2007-07-10
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the thioesterase domain of human fatty acid synthase inhibited by Orlistat.
Nat.Struct.Mol.Biol., 14, 2007
4IIR
DownloadVisualize
BU of 4iir by Molmil
Crystal Structure of AMPPNP-bound Human PRPF4B kinase domain
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, SULFATE ION, ...
著者Mechin, I, Haas, K, Chen, X, Zhang, Y, McLean, L.
登録日2012-12-20
公開日2013-08-28
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Evaluation of Cancer Dependence and Druggability of PRP4 Kinase Using Cellular, Biochemical, and Structural Approaches.
J.Biol.Chem., 288, 2013
4IOQ
DownloadVisualize
BU of 4ioq by Molmil
Crystal Structure of the first bromodomain of BRD4 in complex with pyrrolidin-2-one
分子名称: 1,2-ETHANEDIOL, Bromodomain-containing protein 4, pyrrolidin-2-one
著者Lolli, G, Battistutta, R.
登録日2013-01-08
公開日2013-10-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Different orientations of low-molecular-weight fragments in the binding pocket of a BRD4 bromodomain.
Acta Crystallogr.,Sect.D, 69, 2013
2P6N
DownloadVisualize
BU of 2p6n by Molmil
Human DEAD-box RNA helicase DDX41, helicase domain
分子名称: ATP-dependent RNA helicase DDX41
著者Karlberg, T, Ogg, D, Arrowsmith, C.H, Berglund, H, Busam, R.D, Collins, R, Dahlgren, L.G, Edwards, A, Flodin, S, Flores, A, Graslund, S, Hallberg, B.M, Hammarstrom, M, Johansson, I, Kotenyova, T, Lehtio, L, Moche, M, Nordlund, P, Nyman, T, Persson, C, Sagemark, J, Stenmark, P, Sundstrom, M, Thorsell, A.G, Van Den Berg, S, Weigelt, J, Holmberg-Schiavone, L, Structural Genomics Consortium (SGC)
登録日2007-03-19
公開日2007-04-03
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Comparative Structural Analysis of Human DEAD-Box RNA Helicases.
Plos One, 5, 2010
2P9I
DownloadVisualize
BU of 2p9i by Molmil
Crystal Structure of bovine Arp2/3 Complex co-crystallized with ADP and crosslinked with gluteraldehyde
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin-like protein 2, Actin-like protein 3, ...
著者Nolen, B.J, Pollard, T.D.
登録日2007-03-26
公開日2007-05-29
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Insights into the Influence of Nucleotides on Actin Family Proteins from Seven Structures of Arp2/3 Complex.
Mol.Cell, 26, 2007
4IOR
DownloadVisualize
BU of 4ior by Molmil
Crystal Structure of the first bromodomain of BRD4 in complex with DMSO
分子名称: 1,2-ETHANEDIOL, Bromodomain-containing protein 4, DIMETHYL SULFOXIDE
著者Lolli, G, Battistutta, R.
登録日2013-01-08
公開日2013-10-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Different orientations of low-molecular-weight fragments in the binding pocket of a BRD4 bromodomain.
Acta Crystallogr.,Sect.D, 69, 2013
2P9K
DownloadVisualize
BU of 2p9k by Molmil
Crystal structure of bovine Arp2/3 complex co-crystallized with ATP and crosslinked with glutaraldehyde
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Actin-like protein 2, Actin-like protein 3, ...
著者Nolen, B.J, Pollard, T.D.
登録日2007-03-26
公開日2007-05-29
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Insights into the Influence of Nucleotides on Actin Family Proteins from Seven Structures of Arp2/3 Complex.
Mol.Cell, 26, 2007
4JGC
DownloadVisualize
BU of 4jgc by Molmil
Human TDG N140A mutant IN A COMPLEX WITH 5-carboxylcytosine (5caC)
分子名称: 4-amino-2-oxo-1,2-dihydropyrimidine-5-carboxylic acid, G/T mismatch-specific thymine DNA glycosylase, oligonucleotide, ...
著者Hashimoto, H, Zhang, X, Cheng, X.
登録日2013-02-28
公開日2013-05-29
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.582 Å)
主引用文献Activity and crystal structure of human thymine DNA glycosylase mutant N140A with 5-carboxylcytosine DNA at low pH.
Dna Repair, 12, 2013
2PJL
DownloadVisualize
BU of 2pjl by Molmil
Crystal Structure of Human Estrogen-Related Receptor alpha in Complex with a Synthetic Inverse Agonist reveals its Novel Molecular Mechanism
分子名称: 1-CYCLOHEXYL-N-{[1-(4-METHYLPHENYL)-1H-INDOL-3-YL]METHYL}METHANAMINE, Steroid hormone receptor ERR1
著者Kallen, J.
登録日2007-04-16
公開日2007-06-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of human estrogen-related receptor alpha in complex with a synthetic inverse agonist reveals its novel molecular mechanism.
J.Biol.Chem., 282, 2007
4FU6
DownloadVisualize
BU of 4fu6 by Molmil
Crystal structure of the PSIP1 PWWP domain
分子名称: GLYCEROL, PC4 and SFRS1-interacting protein, SULFATE ION, ...
著者Qin, S, Tempel, W, Xu, C, Wu, H, Dong, A, Cerovina, T, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2012-06-28
公開日2012-08-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure and function of the nucleosome-binding PWWP domain.
Trends Biochem.Sci., 39, 2014
2Q9Q
DownloadVisualize
BU of 2q9q by Molmil
The crystal structure of full length human GINS complex
分子名称: DNA replication complex GINS protein PSF1, DNA replication complex GINS protein PSF2, GINS complex subunit 3, ...
著者Chang, Y.P, Wang, G, Chen, X.S.
登録日2007-06-13
公開日2007-08-07
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献Crystal structure of the GINS complex and functional insights into its role in DNA replication.
Proc.Natl.Acad.Sci.Usa, 104, 2007
4FTG
DownloadVisualize
BU of 4ftg by Molmil
The crystal structure of an AHNAK peptide in complex with the S100A10/AnxA2 heterotetramer
分子名称: Annexin A2, ISOPROPYL ALCOHOL, Neuroblast differentiation-associated protein AHNAK, ...
著者Ozorowski, G, Luecke, H.
登録日2012-06-27
公開日2013-01-02
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (2.5054 Å)
主引用文献Structure of a C-terminal AHNAK peptide in a 1:2:2 complex with S100A10 and an acetylated N-terminal peptide of annexin A2.
Acta Crystallogr.,Sect.D, 69, 2013
4JAI
DownloadVisualize
BU of 4jai by Molmil
Crystal Structure of Aurora Kinase A in complex with N-{4-[(6-oxo-5,6-dihydrobenzo[c][1,8]naphthyridin-1-yl)amino]phenyl}benzamide
分子名称: Aurora kinase A, N-{4-[(6-oxo-5,6-dihydrobenzo[c][1,8]naphthyridin-1-yl)amino]phenyl}benzamide
著者Jiang, X, Josephson, K, Huck, B, Goutopoulos, A, Karra, S.
登録日2013-02-18
公開日2013-05-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献SAR and evaluation of novel 5H-benzo[c][1,8]naphthyridin-6-one analogs as Aurora kinase inhibitors.
Bioorg.Med.Chem.Lett., 23, 2013
7X6T
DownloadVisualize
BU of 7x6t by Molmil
Discovery of Selective BRD4 BD1 Inhibitor Based on [1,2,4] triazolo [4,3-b] pyridazine Scaffold
分子名称: (2~{R})-2-[[3-methyl-6-(2-phenoxyphenyl)-[1,2,4]triazolo[4,3-b]pyridazin-8-yl]amino]propanamide, Isoform C of Bromodomain-containing protein 4
著者Cao, D, Xiong, B.
登録日2022-03-08
公開日2023-03-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Discovery of Selective BRD4 BD1 Inhibitor Based on [1,2,4] triazolo [4,3-b] pyridazine Scaffold
To Be Published
7X9D
DownloadVisualize
BU of 7x9d by Molmil
DNMT3B in complex with harmine
分子名称: 7-METHOXY-1-METHYL-9H-BETA-CARBOLINE, DNA (cytosine-5)-methyltransferase 3-like, DNA (cytosine-5)-methyltransferase 3B
著者Cho, C.-C, Yuan, H.S.
登録日2022-03-15
公開日2023-03-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.08 Å)
主引用文献Mechanistic Insights into Harmine-Mediated Inhibition of Human DNA Methyltransferases and Prostate Cancer Cell Growth.
Acs Chem.Biol., 18, 2023

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon