PDB: 47120 件ウェブページステータス検索Chemie searchBIRD

---

8ENQ	E. coli CsgA fibril (218-pixel box size) 分子名称: Major curlin subunit 著者 Bu, F, Liu, B. 登録日 2022-09-30 公開日 2023-10-04 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structural insight into Escherichia coli CsgA amyloid fibril assembly. Mbio, 15, 2024
7MZ1	Structure of human DNA polymerase beta complexed with dzA in the template base paired with incoming non-hydrolyzable TTP 分子名称: 5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]thymidine, DNA (5'-D(*CP*CP*GP*AP*CP*(4DU)P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3'), ... 著者 Koag, M.-C, Lee, S. 登録日 2021-05-23 公開日 2022-05-25 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.175 Å) 主引用文献 Structure of human DNA polymerase beta complexed with dzA in the template base paired with incoming non-hydrolyzable TTP To Be Published
7MZ0	Structure of human DNA polymerase beta complexed with dzA as the template base in a 1-nucleotide gapped DNA 分子名称: DNA (5'-D(*CP*CP*GP*AP*CP*(4DU)P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3'), DNA (5'-D(P*GP*TP*CP*GP*G)-3'), ... 著者 Koag, M.-C, Lee, S. 登録日 2021-05-23 公開日 2022-05-25 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.021 Å) 主引用文献 Structure Of Human Dna Polymerase Beta Complexed With dzA As The Template Base In A 1-Nucleotide Gapped Dna To Be Published
8SGP	human liver mitochondrial Medium-chain specific acyl-CoA dehydrogenase 分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Medium-chain specific acyl-CoA dehydrogenase, mitochondrial 著者 Zhang, Z. 登録日 2023-04-12 公開日 2024-02-21 実験手法 ELECTRON MICROSCOPY (2.69 Å) 主引用文献 High-Resolution Structural Proteomics of Mitochondria Using the 'Build and Retrieve' Methodology. Mol.Cell Proteomics, 22, 2023
8RRR	Alpha-synuclein amyloid fibril 分子名称: Alpha-synuclein 著者 Saibil, H.R, Monistrol, J. 登録日 2024-01-23 公開日 2024-02-28 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Stepwise recruitment of Hsc70 by DNAJB1 produces ordered arrays primed for bursts of amyloid fibre disassembly Biorxiv, 2024
8SGR	human liver mitochondrial Isovaleryl-CoA dehydrogenase 分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Isovaleryl-CoA dehydrogenase, mitochondrial 著者 Zhang, Z. 登録日 2023-04-13 公開日 2024-02-21 実験手法 ELECTRON MICROSCOPY (2.84 Å) 主引用文献 High-Resolution Structural Proteomics of Mitochondria Using the 'Build and Retrieve' Methodology. Mol.Cell Proteomics, 22, 2023
8EVO	Sulfatase from Mycobacterium tuberculosis (Rv3406) in complex with inhibitor FG2216 分子名称: Alpha-ketoglutarate-dependent sulfate ester dioxygenase, N-[(1-CHLORO-4-HYDROXYISOQUINOLIN-3-YL)CARBONYL]GLYCINE, NICKEL (II) ION 著者 Juan, T.-J, Leung, I, Squire, C.J. 登録日 2022-10-20 公開日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Sulfatase from Mycobacterium tuberculosis (Rv3406) in complex with inhibitors NOG and FG2216 To Be Published
8SGS	human liver mitochondrial Short-chain specific acyl-CoA dehydrogenase 分子名称: COENZYME A, FLAVIN-ADENINE DINUCLEOTIDE, Short-chain specific acyl-CoA dehydrogenase, ... 著者 Zhang, Z. 登録日 2023-04-13 公開日 2024-02-21 実験手法 ELECTRON MICROSCOPY (3.15 Å) 主引用文献 High-Resolution Structural Proteomics of Mitochondria Using the 'Build and Retrieve' Methodology. Mol.Cell Proteomics, 22, 2023
8ET0	Crystal Complex of murine Cyclooxygenase-2 with alpaca nanobody F9 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, IBUPROFEN, ... 著者 Xu, S, Banerjee, S, Uddin, M.J, Goodman, M.C, Marnett, L.J. 登録日 2022-10-15 公開日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Crystal complex of murine cycloxygenase-2 with alpaca nanobody F9 To Be Published
4LOC	Structure of the carboxyl transferase domain from Rhizobium etli pyruvate carboxylase with oxamate and biotin 分子名称: BIOTIN, CHLORIDE ION, GLYCEROL, ... 著者 Lietzan, A.D, St.Maurice, M. 登録日 2013-07-12 公開日 2014-09-10 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (2.26 Å) 主引用文献 The role of biotin and oxamate in the carboxyltransferase reaction of pyruvate carboxylase. Arch.Biochem.Biophys., 562C, 2014
8RQM	Alpha-synuclein amyloid fibrils 分子名称: Alpha-synuclein 著者 Saibil, H.R, Monistrol, J. 登録日 2024-01-18 公開日 2024-02-28 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Stepwise recruitment of Hsc70 by DNAJB1 produces ordered arrays primed for bursts of amyloid fibre disassembly Biorxiv, 2024
6EDR	Crystal Structure of Human CD38 in Complex with 4'-Thioribose NAD+ 分子名称: ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1, [[(2~{R},3~{S},4~{R},5~{R})-5-(3-aminocarbonylpyridin-1-ium-1-yl)-3,4-bis(oxidanyl)thiolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate 著者 Dai, Z, Zhang, X.N, Nasertorabi, F, Cheng, Q, Pei, H, Louie, S.G, Stevens, C.R, Zhang, Y. 登録日 2018-08-10 公開日 2018-11-21 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Facile chemoenzymatic synthesis of a novel stable mimic of NAD. Chem Sci, 9, 2018
7MZ4	Structure of human DNA polymerase beta complexed with 3-deaza-3-methyladenine (3dMeA) in the template base paired with incoming dTTP 分子名称: 5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]thymidine, DNA (5'-D(*CP*CP*GP*AP*CP*(DZM)P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3'), ... 著者 Koag, M.-C, Lee, S. 登録日 2021-05-24 公開日 2022-06-01 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.076 Å) 主引用文献 Structure of human DNA polymerase beta complexed with 3-deaza-3-methyladenine (3dMeA) in the template base paired with incoming dTTP To Be Published
8SNF	Crystal structure of metformin hydrolase (MfmAB) from Pseudomonas mendocina sp. MET-2 with Ni2+2 bound 分子名称: NICKEL (II) ION, metformin hydrolase subunit A, metformin hydrolase subunit B 著者 Tassoulas, L.J, Rankin, J.A, Elias, M.H, Wackett, L.P. 登録日 2023-04-27 公開日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Dinickel enzyme evolved to metabolize the pharmaceutical metformin and its implications for wastewater and human microbiomes. Proc.Natl.Acad.Sci.USA, 121, 2024
8S32	GroEL with bound GroTAC peptide 分子名称: Chaperonin GroEL, GroTAC 著者 Wroblewski, K, Izert-Nowakowska, M.A, Goral, T.K, Klimecka, M.M, Kmiecik, S, Gorna, M.W. 登録日 2024-02-19 公開日 2024-02-28 実験手法 ELECTRON MICROSCOPY (2.45 Å) 主引用文献 Depletion of essential GroEL protein in Escherichia coli using Clp-Interacting Peptidic Protein Erasers (CLIPPERs) To Be Published
8SXG	The C-terminal protease CtpA-LbcA complex of pseudomonas aeruginosa with the TPR at the low position 分子名称: Probable carboxyl-terminal protease, TPR repeat-containing protein PA4667, unidentified peptide 著者 Hsu, H.-C, Li, H. 登録日 2023-05-22 公開日 2024-03-06 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (4.14 Å) 主引用文献 P. aeruginosa CtpA protease adopts a novel activation mechanism to initiate the proteolytic process. Embo J., 43, 2024
6EFD	Hsa Siglec and Unique domains in complex with the sialyl T antigen trisaccharide 分子名称: N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-alpha-D-galactopyranose, SODIUM ION, Streptococcal hemagglutinin 著者 Iverson, T.M. 登録日 2018-08-16 公開日 2020-02-19 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Origins of glycan selectivity in streptococcal Siglec-like adhesins suggest mechanisms of receptor adaptation. Nat Commun, 13, 2022
8RYS	Human IL-1beta, unliganded 分子名称: Interleukin-1 beta, SULFATE ION 著者 Rondeau, J.-M, Lehmann, S. 登録日 2024-02-09 公開日 2024-03-06 最終更新日 2024-06-05 実験手法 X-RAY DIFFRACTION (1.16 Å) 主引用文献 Ligandability Assessment of IL-1 beta by Integrated Hit Identification Approaches. J.Med.Chem., 67, 2024
4M94	d(ATCCGTTATAACGGAT) complexed with Moloney Murine Leukemia virus reverse transcriptase catalytic fragment 分子名称: 1,2-ETHANEDIOL, 5' d(ATCCGttA) 3', 5' d(TAACGGAT) 3', ... 著者 Singh, I. 登録日 2013-08-14 公開日 2014-03-12 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.14 Å) 主引用文献 The structure of an authentic spore photoproduct lesion in DNA suggests a basis for recognition. Acta Crystallogr.,Sect.D, 70, 2014
8RWU	ACDC domain of the AP2-I transcription factor from Plasmodium vivax 分子名称: AP2 domain transcription factor AP2-I, putative 著者 Nessler, S, Le Berre, M, Gallay Li de la Sierra, I. 登録日 2024-02-05 公開日 2024-03-06 最終更新日 2024-04-17 実験手法 X-RAY DIFFRACTION (3.152 Å) 主引用文献 Structural characterization of the ACDC domain from ApiAP2 proteins of the malaria parasite. Biorxiv, 2024
4M9H	DNA Polymerase Beta E295K Soaked with dTTP 分子名称: CHLORIDE ION, DNA Downstream Strand, DNA Primer Strand, ... 著者 Eckenroth, B.E, Doublie, S. 登録日 2013-08-14 公開日 2013-10-16 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.394 Å) 主引用文献 The E295K Cancer Variant of Human Polymerase beta Favors the Mismatch Conformational Pathway during Nucleotide Selection. J.Biol.Chem., 288, 2013
7MZ8	Structure of human DNA polymerase beta complexed with 3-deaza-3-methyladenine (3dMeA) at N-1 of the template base paired with incoming dTTP 分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, DNA (5'-D(*CP*CP*GP*AP*CP*GP*(DZM)P*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*T)-3'), ... 著者 Koag, M.-C, Lee, S. 登録日 2021-05-24 公開日 2022-06-01 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structure Of Human Dna Polymerase Beta Complexed With 8Oa As The Template Base In A 1-Nucleotide Gapped Dna To Be Published
7MZ3	Structure of human DNA polymerase beta complexed with 3-deaza-3-methyladenine (3dMeA) as the template base in a 1-nucleotide gapped DNA 分子名称: DNA (5'-D(*CP*CP*GP*AP*CP*(DZM)P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3'), DNA (5'-D(P*GP*TP*CP*GP*G)-3'), ... 著者 Koag, M.-C, Lee, S. 登録日 2021-05-24 公開日 2022-06-01 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.418 Å) 主引用文献 Structure of human DNA polymerase beta complexed with 3-deaza-3-methyladenine (3dMeA) as the template base in a 1-nucleotide gapped DNA To Be Published
8RXA	ACDC domain of AP2-O5 from Plasmodium falciparum 分子名称: AP2 domain transcription factor AP2-O5, putative 著者 Nessler, S, Le Berre, M, Gallay Li de la Sierra, I. 登録日 2024-02-06 公開日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.751 Å) 主引用文献 Structural characterization of the ACDC domain from ApiAP2 proteins of the malaria parasite. Biorxiv, 2024
8SG4	E1435Q Ycf1 mutant in dephosphorylated state 分子名称: Metal resistance protein YCF1 著者 Khandelwal, N.K, Tomasiak, T.M. 登録日 2023-04-11 公開日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.11 Å) 主引用文献 E1435Q Ycf1 mutant in dephosphorylated state To Be Published

<1425142614271428142914301431143214331434143514361437143814391440>