PDB: 5591 件ウェブページステータス検索Chemie searchBIRD

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8F4X	Top-down design of protein architectures with reinforcement learning 分子名称: RC_I_1-H11 著者 Borst, A.J, Baker, D. 登録日 2022-11-11 公開日 2023-05-10 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.01 Å) 主引用文献 Top-down design of protein architectures with reinforcement learning. Science, 380, 2023
8F53	Top-down design of protein architectures with reinforcement learning 分子名称: RC_I_2 著者 Borst, A.J, Baker, D. 登録日 2022-11-11 公開日 2023-05-10 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (2.93 Å) 主引用文献 Top-down design of protein architectures with reinforcement learning. Science, 380, 2023
4KGS	Backbone Modifications in the Protein GB1 Loops: beta-3-Val21, beta-3-Asp40 分子名称: GLYCEROL, Streptococcal Protein GB1 Backbone Modified Variant: beta-3-Val21, beta-3-Asp40 著者 Reinert, Z.E, Lengyel, G.A, Horne, W.S. 登録日 2013-04-29 公開日 2013-09-04 最終更新日 2024-07-10 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Protein-like Tertiary Folding Behavior from Heterogeneous Backbones. J.Am.Chem.Soc., 135, 2013
8ERW	Precisely patterned nanofibers made from extendable protein multiplexes 分子名称: C2HR4_8r 著者 Bick, M.J, Parmeggiani, F, Bethel, N.P, Sankaran, B, Baker, D. 登録日 2022-10-12 公開日 2023-08-23 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.88 Å) 主引用文献 Precisely patterned nanofibres made from extendable protein multiplexes. Nat.Chem., 15, 2023
8EOZ	Precisely patterned nanofibers made from extendable protein multiplexes 分子名称: C3HR3_4r 著者 Bera, A.K, Bethel, N.P, Kang, A. 登録日 2022-10-04 公開日 2023-08-16 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Precisely patterned nanofibres made from extendable protein multiplexes. Nat.Chem., 15, 2023
8EOV	Precisely patterned nanofibers made from extendable protein multiplexes 分子名称: C2HR1_4r, PHOSPHATE ION 著者 Bera, A.K, Bethel, N.P. 登録日 2022-10-04 公開日 2023-08-16 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.59 Å) 主引用文献 Precisely patterned nanofibres made from extendable protein multiplexes. Nat.Chem., 15, 2023
8EOX	Precisely patterned nanofibers made from extendable protein multiplexes 分子名称: C4HR1_4r 著者 Bera, A.K, Bethel, N.P. 登録日 2022-10-04 公開日 2023-08-16 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Precisely patterned nanofibres made from extendable protein multiplexes. Nat.Chem., 15, 2023
6WMK	Crystal structure of beta sheet heterodimer LHD29 分子名称: Beta sheet heterodimer LHD29 - Chain A, Beta sheet heterodimer LHD29 - Chain B 著者 Bera, A.K, Sahtoe, D.D, Kang, A, Sankaran, B, Baker, D. 登録日 2020-04-21 公開日 2021-11-10 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Reconfigurable asymmetric protein assemblies through implicit negative design. Science, 375, 2022
3GDK	Crystal structure of the orotidine 5'-monophosphate decarboxylase from Saccharomyces cerevisiae 分子名称: Orotidine 5'-phosphate decarboxylase 著者 Fedorov, A.A, Fedorov, E.V, Wood, B.M, Gerlt, J.A, Almo, S.C. 登録日 2009-02-24 公開日 2009-06-23 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Mechanism of the orotidine 5'-monophosphate decarboxylase-catalyzed reaction: evidence for substrate destabilization. Biochemistry, 48, 2009
4LPW	Crystal structure of TENCON variant A6 分子名称: TENCON variant A6 著者 Teplyakov, A, Obmolova, G, Gilliland, G.L. 登録日 2013-07-16 公開日 2014-01-29 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 C-terminal beta-strand swapping in a consensus-derived fibronectin Type III scaffold. Proteins, 82, 2014
4KGT	Backbone Modifications in the Protein GB1 Turns: Aib10, D-Pro47 分子名称: Streptococcal Protein GB1 Backbone Modified Variant: Aib10, D-Pro47 著者 Reinert, Z.E, Lengyel, G.A, Horne, W.S. 登録日 2013-04-29 公開日 2013-09-04 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Protein-like Tertiary Folding Behavior from Heterogeneous Backbones. J.Am.Chem.Soc., 135, 2013
6D02	Cross-alpha Amyloid-like Structure alphaAmL, 2nd form 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CARBONATE ION, PHOSPHATE ION, ... 著者 Zhang, S.-Q, Liu, L, Degrado, W.F. 登録日 2018-04-10 公開日 2019-02-20 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Designed peptides that assemble into cross-alpha amyloid-like structures. Nat. Chem. Biol., 14, 2018
4LPY	Crystal structure of TENCON variant G10 分子名称: SODIUM ION, TENCON variant G10 著者 Teplyakov, A, Obmolova, G, Gilliland, G.L. 登録日 2013-07-16 公開日 2014-01-29 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.92 Å) 主引用文献 C-terminal beta-strand swapping in a consensus-derived fibronectin Type III scaffold. Proteins, 82, 2014
4LPU	Crystal structure of TENCON variant P40AR2-32R2 分子名称: TENCON variant P40AR2-32R2 著者 Teplyakov, A, Obmolova, G, Gilliland, G.L. 登録日 2013-07-16 公開日 2014-01-29 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 C-terminal beta-strand swapping in a consensus-derived fibronectin Type III scaffold. Proteins, 82, 2014
5VF1	X-ray Crystallographic Structure of a Giant Double-Walled Peptide Nanotube Formed by a Macrocyclic Beta-Sheet Containing ABeta16-22 分子名称: ORN-LYS-LEU-VAL-PHI-PHE-ALA-GLU-ORN-GLU-ALA-PHE-MEA-VAL-LEU-LYS 著者 Chen, K.H, Corro, K.A, Le, S.P, Nowick, J.S. 登録日 2017-04-06 公開日 2017-06-21 最終更新日 2019-11-27 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 X-ray Crystallographic Structure of a Giant Double-Walled Peptide Nanotube Formed by a Macrocyclic beta-Sheet Containing A beta 16-22. J. Am. Chem. Soc., 139, 2017
4LPV	Crystal structure of TENCON variant P41BR3-42 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, TENCON variant P41BR3-42 著者 Teplyakov, A, Obmolova, G, Luo, J, Gilliland, G.L. 登録日 2013-07-16 公開日 2014-01-29 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 C-terminal beta-strand swapping in a consensus-derived fibronectin Type III scaffold. Proteins, 82, 2014
4KYV	Crystal Structure of dehalogenase HaloTag2 with HALTS at the resolution 1.8A. Northeast Structural Genomics Consortium (NESG) Target OR150 分子名称: N-(2-ethoxy-3,5-dimethylbenzyl)-1H-tetrazol-5-amine, SODIUM ION, dehalogenase HaloTag2 著者 Kuzin, A, Lew, S, Seetharaman, J, Maglaqui, M, Xiao, R, Kohan, E, Wang, H, Everett, J.K, Acton, T.B, Kornhaber, G, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG) 登録日 2013-05-29 公開日 2013-07-24 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.796 Å) 主引用文献 Northeast Structural Genomics Consortium Target OR150 To be Published
4KUP	Endothiapepsin in complex with 20mM acylhydrazone inhibitor 分子名称: (2S)-2-azanyl-3-(3H-indol-3-yl)-N-[(E)-(2,4,6-trimethylphenyl)methylideneamino]propanamide, ACETATE ION, DIMETHYL SULFOXIDE, ... 著者 Radeva, N, Heine, A, Klebe, G. 登録日 2013-05-22 公開日 2014-04-02 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.311 Å) 主引用文献 Structure-based design of inhibitors of the aspartic protease endothiapepsin by exploiting dynamic combinatorial chemistry. Angew.Chem.Int.Ed.Engl., 53, 2014
4IJB	Crystal Structure of Engineered Protein, Northeast Structural Genomics Consortium Target OR288 分子名称: Engineered Protein OR288 著者 Vorobiev, S, Su, M, Bick, M.J, Seetharaman, J, Khare, S, Maglaqui, M, Xiao, R, Lee, D, Day, A, Everett, J.K, Acton, T.B, Baker, D, Montelione, G.T, Hunt, J, Tong, L, Northeast Structural Genomics Consortium (NESG) 登録日 2012-12-21 公開日 2013-01-16 最終更新日 2013-02-27 実験手法 X-RAY DIFFRACTION (1.739 Å) 主引用文献 Crystal Structure of Engineered Protein OR288. To be Published
3G1V	Crystal structure of the mutant D70G of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with 5-fluorouridine 5'-monophosphate 分子名称: 5-FLUORO-URIDINE-5'-MONOPHOSPHATE, CHLORIDE ION, Orotidine 5'-phosphate decarboxylase 著者 Fedorov, A.A, Fedorov, E.V, Chan, K.K, Gerlt, J.A, Almo, S.C. 登録日 2009-01-30 公開日 2009-06-23 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Mechanism of the orotidine 5'-monophosphate decarboxylase-catalyzed reaction: evidence for substrate destabilization. Biochemistry, 48, 2009
3G24	Crystal structure of the mutant D70N of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with 6-azauridine 5'-monophosphate 分子名称: 6-AZA URIDINE 5'-MONOPHOSPHATE, Orotidine 5'-phosphate decarboxylase 著者 Fedorov, A.A, Fedorov, E.V, Chan, K.K, Gerlt, J.A, Almo, S.C. 登録日 2009-01-30 公開日 2009-06-23 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Mechanism of the orotidine 5'-monophosphate decarboxylase-catalyzed reaction: evidence for substrate destabilization. Biochemistry, 48, 2009
3GDL	Crystal structure of the orotidine 5'-monophosphate decarboxylase from Saccharomyces cerevisiae complexed with 6-azauridine 5'-monophosphate 分子名称: 6-AZA URIDINE 5'-MONOPHOSPHATE, Orotidine 5'-phosphate decarboxylase 著者 Fedorov, A.A, Fedorov, E.V, Wood, B.M, Gerlt, J.A, Almo, S.C. 登録日 2009-02-24 公開日 2009-06-23 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Mechanism of the orotidine 5'-monophosphate decarboxylase-catalyzed reaction: evidence for substrate destabilization. Biochemistry, 48, 2009
3GDR	Crystal structure of the D91N mutant of the orotidine 5'-monophosphate decarboxylase from Saccharomyces cerevisiae 分子名称: Orotidine 5'-phosphate decarboxylase 著者 Fedorov, A.A, Fedorov, E.V, Wood, B.M, Gerlt, J.A, Almo, S.C. 登録日 2009-02-24 公開日 2009-06-23 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Mechanism of the orotidine 5'-monophosphate decarboxylase-catalyzed reaction: evidence for substrate destabilization. Biochemistry, 48, 2009
4M6A	N-Terminal beta-Strand Swapping in a Consensus Derived Alternative Scaffold Driven by Stabilizing Hydrophobic Interactions 分子名称: Tencon 著者 Luo, J, Teplyakov, A, Obmolova, G, Malia, T.J, Chan, W, Jocobs, S.A, O'neil, K.T, Gilliland, G.L. 登録日 2013-08-09 公開日 2014-02-26 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.71 Å) 主引用文献 N-terminal beta-strand swapping in a consensus-derived alternative scaffold driven by stabilizing hydrophobic interactions. Proteins, 82, 2014
4LPT	Crystal structure of monomeric TENCON variant P54CR4-31 分子名称: TENCON variant P54CR4-31 著者 Teplyakov, A, Obmolova, G, Gilliland, G.L. 登録日 2013-07-16 公開日 2014-01-29 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.544 Å) 主引用文献 C-terminal beta-strand swapping in a consensus-derived fibronectin Type III scaffold. Proteins, 82, 2014

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