PDB: 13252 件ウェブページステータス検索Chemie searchBIRD

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3KS8	Crystal structure of Reston ebolavirus VP35 RNA binding domain in complex with 18bp dsRNA 分子名称: 5'-R(*AP*GP*AP*AP*GP*GP*AP*GP*GP*GP*AP*GP*GP*GP*AP*GP*GP*A)-3', 5'-R(*UP*CP*CP*UP*CP*CP*CP*UP*CP*CP*CP*UP*CP*CP*UP*UP*CP*U)-3', Polymerase cofactor VP35 著者 Kimberlin, C.R, Bornholdt, Z.A, Li, S, Woods, V.L, Macrae, I.J, Saphire, E.O. 登録日 2009-11-20 公開日 2010-01-12 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.401 Å) 主引用文献 Ebolavirus VP35 uses a bimodal strategy to bind dsRNA for innate immune suppression. Proc.Natl.Acad.Sci.USA, 107, 2009
2ASJ	oxoG-modified Preinsertion Binary Complex 分子名称: 5'-D(*CP*TP*AP*AP*CP*(8OG)*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3', 5'-D(*GP*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*(DDG))-3', CALCIUM ION, ... 著者 Rechkoblit, O, Malinina, L, Cheng, Y, Kuryavyi, V, Broyde, S, Geacintov, N.E, Patel, D.J. 登録日 2005-08-23 公開日 2006-01-10 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Stepwise Translocation of Dpo4 Polymerase during Error-Free Bypass of an oxoG Lesion Plos Biol., 4, 2006
4QBT	Crystal structure of tyrosine bound human tyrosyl tRNA synthetase 分子名称: GLYCEROL, PHOSPHATE ION, POTASSIUM ION, ... 著者 Mathew, S, Schimmel, P. 登録日 2014-05-08 公開日 2014-12-17 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 A human tRNA synthetase is a potent PARP1-activating effector target for resveratrol. Nature, 519, 2014
4Q93	Crystal structure of resveratrol bound human tyrosyl tRNA synthetase 分子名称: CHLORIDE ION, GLYCEROL, PHOSPHATE ION, ... 著者 Mathew, S, Schimmel, P. 登録日 2014-04-28 公開日 2014-12-17 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 A human tRNA synthetase is a potent PARP1-activating effector target for resveratrol. Nature, 519, 2014
2L9J	hRSV M2-1 core domain structure 分子名称: Matrix protein 2-1 著者 Dubosclard, V, Blondot, M, Bontems, F, Eleouet, J, Sizun, C. 登録日 2011-02-12 公開日 2012-02-15 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structure and functional analysis of the RNA- and viral phosphoprotein-binding domain of respiratory syncytial virus M2-1 protein. Plos Pathog., 8, 2012
5J0R	Binary complex crystal structure of DNA polymerase Beta with C:A mismatch at the primer terminus 分子名称: DNA polymerase beta, Downstream Primer Strand, Primer Strand, ... 著者 Batra, V.K, Wilson, S.H. 登録日 2016-03-28 公開日 2016-10-26 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.001 Å) 主引用文献 Structures of DNA Polymerase Mispaired DNA Termini Transitioning to Pre-catalytic Complexes Support an Induced-Fit Fidelity Mechanism. Structure, 24, 2016
5J0X	Binary complex crystal structure of DNA polymerase Beta with T:G mismatch at the primer terminus 分子名称: DNA polymerase beta, Downstream Primer Strand, Primer Strand, ... 著者 Batra, V.K, Wilson, S.H. 登録日 2016-03-28 公開日 2016-10-26 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structures of DNA Polymerase Mispaired DNA Termini Transitioning to Pre-catalytic Complexes Support an Induced-Fit Fidelity Mechanism. Structure, 24, 2016
5J0O	Binary complex crystal structure of DNA polymerase Beta with A:A mismatch at the primer terminus 分子名称: DNA (5'-D(*CP*CP*GP*AP*CP*AP*AP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3'), DNA (5'-D(P*GP*TP*CP*GP*G)-3'), ... 著者 Batra, V.K, Wilson, S.H. 登録日 2016-03-28 公開日 2016-10-26 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structures of DNA Polymerase Mispaired DNA Termini Transitioning to Pre-catalytic Complexes Support an Induced-Fit Fidelity Mechanism. Structure, 24, 2016
5J0W	Binary complex crystal structure of DNA polymerase Beta with T:C mismatch at the primer terminus 分子名称: DNA polymerase beta, Downstream Primer Strand, Primer Strand, ... 著者 Batra, V.K, Wilson, S.H. 登録日 2016-03-28 公開日 2016-10-26 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structures of DNA Polymerase Mispaired DNA Termini Transitioning to Pre-catalytic Complexes Support an Induced-Fit Fidelity Mechanism. Structure, 24, 2016
8GAP	Structure of LARP7 protein p65-telomerase RNA complex in telomerase 分子名称: Telomerase La-related protein p65, Telomerase RNA, Telomerase associated protein p50, ... 著者 Wang, Y, He, Y, Wang, Y, Yang, Y, Singh, M, Eichhorn, C.D, Zhou, Z.H, Feigon, J. 登録日 2023-02-23 公開日 2023-06-28 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structure of LARP7 Protein p65-telomerase RNA Complex in Telomerase Revealed by Cryo-EM and NMR. J.Mol.Biol., 435, 2023
5J0Y	Binary complex crystal structure of DNA polymerase Beta with T:T mismatch at the primer terminus 分子名称: DNA polymerase beta, Downstream Primer Strand, Primer Strand, ... 著者 Batra, V.K, Wilson, S.H. 登録日 2016-03-28 公開日 2016-10-26 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structures of DNA Polymerase Mispaired DNA Termini Transitioning to Pre-catalytic Complexes Support an Induced-Fit Fidelity Mechanism. Structure, 24, 2016
5J0P	Binary complex crystal structure of DNA polymerase Beta with A:C mismatch at the primer terminus 分子名称: DNA polymerase beta, Downstream Primer Strand, Primer Strand, ... 著者 Batra, V.K, Wilson, S.H. 登録日 2016-03-28 公開日 2016-10-26 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structures of DNA Polymerase Mispaired DNA Termini Transitioning to Pre-catalytic Complexes Support an Induced-Fit Fidelity Mechanism. Structure, 24, 2016
5J0S	Binary complex crystal structure of DNA polymerase Beta with C:T mismatch at the primer terminus 分子名称: DNA polymerase beta, Downstream Primer Strand, Primer Strand, ... 著者 Batra, V.K, Wilson, S.H. 登録日 2016-03-28 公開日 2016-10-26 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structures of DNA Polymerase Mispaired DNA Termini Transitioning to Pre-catalytic Complexes Support an Induced-Fit Fidelity Mechanism. Structure, 24, 2016
5J0U	Binary complex crystal structure of DNA polymerase Beta with G:G mismatch at the primer terminus 分子名称: DNA polymerase beta, Downstream Primer Strand, Primer Strand, ... 著者 Batra, V.K, Wilson, S.H. 登録日 2016-03-28 公開日 2016-10-26 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structures of DNA Polymerase Mispaired DNA Termini Transitioning to Pre-catalytic Complexes Support an Induced-Fit Fidelity Mechanism. Structure, 24, 2016
4XQ8	Human DNA polymerase lambda- MgdATP binary complex and complex with 6 paired DNA 分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DNA (5'-D(*CP*AP*GP*TP*AP*C)-3'), DNA (5'-D(P*GP*TP*AP*CP*TP*G)-3'), ... 著者 Tsai, M.D, Liu, M.S. 登録日 2015-01-19 公開日 2016-02-24 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.798 Å) 主引用文献 Structural Mechanism for the Fidelity Modulation of DNA Polymerase lambda J.Am.Chem.Soc., 138, 2016
5J0Q	Binary complex crystal structure of DNA polymerase Beta with A:G mismatch at the primer terminus 分子名称: DNA polymerase beta, Downstream Primer Strand, Primer Strand, ... 著者 Batra, V.K, Wilson, S.H. 登録日 2016-03-28 公開日 2016-10-26 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structures of DNA Polymerase Mispaired DNA Termini Transitioning to Pre-catalytic Complexes Support an Induced-Fit Fidelity Mechanism. Structure, 24, 2016
5J0T	Binary complex crystal structure of DNA polymerase Beta with G:A mismatch at the primer terminus 分子名称: DNA polymerase beta, Downstream Primer Strand, Primer Strand, ... 著者 Batra, V.K, Wilson, S.H. 登録日 2016-03-28 公開日 2016-10-26 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structures of DNA Polymerase Mispaired DNA Termini Transitioning to Pre-catalytic Complexes Support an Induced-Fit Fidelity Mechanism. Structure, 24, 2016
2PFQ	Manganese promotes catalysis in a DNA polymerase lambda-DNA crystal 分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA polymerase lambda, Downstream Primer, ... 著者 Garcia-Diaz, M, Bebenek, K, Krahn, J.M, Pedersen, L.C, Kunkel, T.A. 登録日 2007-04-05 公開日 2007-05-15 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Role of the catalytic metal during polymerization by DNA polymerase lambda. DNA Repair, 6, 2007
4H61	Structure of the Schizosaccharomyces pombe Mediator subunit Med6 分子名称: Mediator of RNA polymerase II transcription subunit 6 著者 Lariviere, L, Plaschka, C, Seizl, M, Wenzeck, L, Kurth, F, Cramer, P. 登録日 2012-09-19 公開日 2012-10-31 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structure of the Mediator head module. Nature, 492, 2012
2PFO	DNA Polymerase lambda in complex with DNA and dUPNPP 分子名称: 1,2-ETHANEDIOL, 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, DNA polymerase lambda, ... 著者 Garcia-Diaz, M, Bebenek, K, Krahn, J.M, Pedersen, L.C, Kunkel, T.A. 登録日 2007-04-05 公開日 2007-05-15 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Role of the catalytic metal during polymerization by DNA polymerase lambda. DNA Repair, 6, 2007
1FW5	SOLUTION STRUCTURE OF MEMBRANE BINDING PEPTIDE OF SEMLIKI FOREST VIRUS MRNA CAPPING ENZYME NSP1 分子名称: NONSTRUCTURAL PROTEIN NSP1 著者 Lampio, A, Kilpelinen, I, Pesonen, S, Karhi, K, Auvinen, P, Somerharju, P, Kriinen, L. 登録日 2000-09-21 公開日 2001-09-21 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Membrane binding mechanism of an RNA virus-capping enzyme. J.Biol.Chem., 275, 2001
2PFN	Na in the active site of DNA Polymerase lambda 分子名称: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, DNA polymerase lambda, Downstream Primer, ... 著者 Garcia-Diaz, M, Bebenek, K, Krahn, J.M, Pedersen, L.C, Kunkel, T.A. 登録日 2007-04-05 公開日 2007-05-15 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Role of the catalytic metal during polymerization by DNA polymerase lambda. DNA Repair, 6, 2007
3IYB	Poliovirus early RNA-release intermediate 分子名称: Genome polyprotein, Precursor polyprotein, VP1 core 著者 Levy, H.C, Bostina, M, Filman, D.J, Hogle, J.M. 登録日 2009-07-21 公開日 2010-03-16 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (10 Å) 主引用文献 Catching a virus in the act of RNA release: a novel poliovirus uncoating intermediate characterized by cryo-electron microscopy. J.Virol., 84, 2010
2PFP	DNA Polymerase lambda in complex with DNA and dCTP 分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA polymerase lambda, Downstream Primer, ... 著者 Garcia-Diaz, M, Bebenek, K, Krahn, J.M, Pedersen, L.C, Kunkel, T.A. 登録日 2007-04-05 公開日 2007-05-15 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Role of the catalytic metal during polymerization by DNA polymerase lambda. DNA Repair, 6, 2007
3FBI	Structure of the Mediator submodule Med7N/31 分子名称: Mediator of RNA polymerase II transcription subunit 31, Mediator of RNA polymerase II transcription subunit 7 著者 Koschubs, T, Seizl, M, Lariviere, L, Kurth, F, Baumli, S, Martin, D.E, Cramer, P. 登録日 2008-11-19 公開日 2008-12-16 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Identification, structure, and functional requirement of the Mediator submodule Med7N/31 Embo J., 28, 2009

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