PDB: 47120 件ウェブページステータス検索Chemie searchBIRD

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7N1N	Prx in complex with ComR DNA-binding domain 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ComR, Prx 著者 Rutbeek, N.R, Prehna, G. 登録日 2021-05-27 公開日 2021-07-28 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Molecular mechanism of quorum sensing inhibition in Streptococcus by the phage protein paratox. J.Biol.Chem., 297, 2021
7N0C	Cryo-EM structure of the monomeric form of SARS-CoV-2 nsp10-nsp14 (E191A)-RNA complex 分子名称: MAGNESIUM ION, Non-structural protein 10, Proofreading exoribonuclease, ... 著者 Liu, C, Yang, Y. 登録日 2021-05-25 公開日 2021-07-28 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structural basis of mismatch recognition by a SARS-CoV-2 proofreading enzyme. Science, 373, 2021
8EUH	cytochrome P450terp (cyp108A1) bound to alpha-terpineol 分子名称: 1,2-ETHANEDIOL, Cytochrome P450-terp, PROTOPORPHYRIN IX CONTAINING FE, ... 著者 Gable, J.A, Follmer, A.H, Poulos, T.L. 登録日 2022-10-18 公開日 2023-02-22 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Cooperative Substrate Binding Controls Catalysis in Bacterial Cytochrome P450terp (CYP108A1). J.Am.Chem.Soc., 2023
6DUZ	Structure of the periplasmic domains of PrgH and PrgK from the assembled Salmonella type III secretion injectisome needle complex 分子名称: Lipoprotein PrgK, Protein PrgH 著者 Hu, J, Worrall, L.J, Vuckovic, M, Atkinson, C.E, Strynadka, N.C.J. 登録日 2018-06-22 公開日 2018-10-03 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Cryo-EM analysis of the T3S injectisome reveals the structure of the needle and open secretin. Nat Commun, 9, 2018
4KHM	HCV NS5B GT1A with GSK5852 分子名称: HCV Polymerase, SULFATE ION, [4-({[5-cyclopropyl-2-(4-fluorophenyl)-3-(methylcarbamoyl)-1-benzofuran-6-yl](methylsulfonyl)amino}methyl)-2-fluorophenyl]boronic acid 著者 Williams, S.P, Kahler, K.M, Shotwell, J.B. 登録日 2013-04-30 公開日 2013-05-15 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Discovery of a Potent Boronic Acid Derived Inhibitor of the HCV RNA-Dependent RNA Polymerase. J.Med.Chem., 57, 2014
8F2W	Structure of a B-Form Dodecamer: 5'-CGCGAATTCGCG-3 分子名称: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), MAGNESIUM ION 著者 Ogbonna, E.N, Wilson, W.D. 登録日 2022-11-08 公開日 2023-02-22 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 X-ray Structure Characterization of the Selective Recognition of AT Base Pair Sequences. Acs Bio Med Chem Au, 3, 2023
4KFE	Crystal structure of Hansenula polymorpha copper amine oxidase-1 reduced by methylamine at pH 7.0 分子名称: COPPER (II) ION, FORMYL GROUP, GLYCEROL, ... 著者 Johnson, B.J, Yukl, E.T, Klema, V.J, Wilmot, C.M. 登録日 2013-04-26 公開日 2013-08-21 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural evidence for the semiquinone in a copper amine oxidase from Hansenula polymorpha: implications for the catalytic mechanism J.Biol.Chem., 2013
4KIV	RECOMBINANT KRINGLE IV-10/W72R MUTANT OF HUMAN APOLIPOPROTEIN(A) 分子名称: APOLIPOPROTEIN 著者 Mochalkin, I, Tulinsky, A, Scanu, A. 登録日 1998-08-26 公開日 1999-05-18 最終更新日 2018-03-14 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Recombinant kringle IV-10 modules of human apolipoprotein(a): structure, ligand binding modes, and biological relevance. Biochemistry, 38, 1999
6DVW	Cryo-EM structure of mouse TRPV3 分子名称: Transient receptor potential cation channel subfamily V member 3 著者 Singh, A.K, McGoldrick, L.L, Sobolevsky, A.I. 登録日 2018-06-25 公開日 2018-09-05 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Structure and gating mechanism of the transient receptor potential channel TRPV3. Nat. Struct. Mol. Biol., 25, 2018
4KI4	Ternary complex of rb69 mutant L415F with ribonucleotides at 0 and -1 position 分子名称: CALCIUM ION, DNA (5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*CP*C)-3'), DNA polymerase, ... 著者 Clausen, A.R, Pedersen, L.C. 登録日 2013-05-01 公開日 2013-10-09 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 Structure-function analysis of ribonucleotide bypass by B family DNA replicases. Proc.Natl.Acad.Sci.USA, 110, 2013
8EUK	cytochrome P450terp (cyp108A1) bound to ethylene glycol 分子名称: 1,2-ETHANEDIOL, Cytochrome P450-terp, PROTOPORPHYRIN IX CONTAINING FE 著者 Gable, J.A, Follmer, A.H, Poulos, T.L. 登録日 2022-10-18 公開日 2023-02-22 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.98 Å) 主引用文献 Cooperative Substrate Binding Controls Catalysis in Bacterial Cytochrome P450terp (CYP108A1). J.Am.Chem.Soc., 2023
8SQO	Crystal Structure of Bacterioferritin (Bfr) from Brucella abortus (magnesium bound, F16L mutant) 分子名称: Bacterioferritin, CHLORIDE ION, MAGNESIUM ION, ... 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2023-05-04 公開日 2023-05-17 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Crystal Structure of Bacterioferritin (Bfr) from Brucella abortus (magnesium bound, F16L mutant) To be published
7NLD	Structure of human Programmed cell death 1 ligand 1 (PD-L1) with low molecular mass inhibitor 分子名称: N-(2-((2'-chloro-3'-(2,3-dihydrobenzo[b][1,4]dioxin-6-yl)-3-methoxy-[1,1'-biphenyl]-4-yl)(methyl)amino)ethyl)methanesulfonamide, Programmed cell death 1 ligand 1 著者 Sala, D, Magiera-Mularz, K, Muszak, D, Surmiak, E, Grudnik, P, Holak, T.A. 登録日 2021-02-22 公開日 2021-08-11 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Terphenyl-Based Small-Molecule Inhibitors of Programmed Cell Death-1/Programmed Death-Ligand 1 Protein-Protein Interaction. J.Med.Chem., 64, 2021
8SQR	Crystal Structure of Bacterioferritin (Bfr) from Brucella abortus (iron bound, F16L mutant) 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, Bacterioferritin, ... 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2023-05-04 公開日 2023-05-17 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Crystal Structure of Bacterioferritin (Bfr) from Brucella abortus (iron bound, F16L mutant) To be published
7N09	Structural basis for branched substrate selectivity in a ketoreductase from Ascaris suum 分子名称: 3-hydroxyacyl-CoA dehydrogenase type-2, NICOTINAMIDE-ADENINE-DINUCLEOTIDE 著者 Dong, H, Chang, M.C.Y. 登録日 2021-05-25 公開日 2021-08-11 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural Basis for Branched Substrate Selectivity in a Ketoreductase from Ascaris suum Acs Catalysis, 11, 2021
6DXN	1.95 Angstrom Resolution Crystal Structure of DsbA Disulfide Interchange Protein from Klebsiella pneumoniae. 分子名称: TRIETHYLENE GLYCOL, Thiol:disulfide interchange protein 著者 Minasov, G, Wawrzak, Z, Shuvalova, L, Kiryukhina, O, Endres, M, Satchell, K.J.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2018-06-29 公開日 2018-07-11 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 A Structural Systems Biology Approach to High-Risk CG23 Klebsiella pneumoniae. Microbiol Resour Announc, 12, 2023
7N3I	Crystal structure of the SARS-CoV-2 receptor binding domain in complex with the human neutralizing antibody Fab fragment C098 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, C098 Fab heavy chain, C098 Fab light chain, ... 著者 Flyak, A.I, Bjorkman, P.J, Barnes, C.O. 登録日 2021-06-01 公開日 2021-08-04 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.03 Å) 主引用文献 Affinity maturation of SARS-CoV-2 neutralizing antibodies confers potency, breadth, and resilience to viral escape mutations. Immunity, 54, 2021
4KKD	The X-ray crystal structure of Mannose-binding lectin-associated serine proteinase-3 reveals the structural basis for enzyme inactivity associated with the 3MC syndrome 分子名称: IMIDAZOLE, Mannan-binding lectin serine protease 1 著者 Yongqing, T, Wilmann, P.G, Reeve, S.B, Coetzer, T.H, Smith, A.I, Whisstock, J.C, Pike, R.N, Wijeyewickrema, L.C. 登録日 2013-05-05 公開日 2013-07-03 最終更新日 2013-08-21 実験手法 X-RAY DIFFRACTION (2.5991 Å) 主引用文献 The X-ray Crystal Structure of Mannose-binding Lectin-associated Serine Proteinase-3 Reveals the Structural Basis for Enzyme Inactivity Associated with the Carnevale, Mingarelli, Malpuech, and Michels (3MC) Syndrome. J.Biol.Chem., 288, 2013
8SGZ	Leishmania tarentolae propionyl-CoA carboxylase (alpha-6-beta-6) 分子名称: 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL, Propionyl-coa carboxylase beta chain, putative, ... 著者 Lee, J.K.J, Liu, Y.T, Hu, J.J, Aphasizheva, I, Aphasizhev, R, Zhou, Z.H. 登録日 2023-04-13 公開日 2023-05-17 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 CryoEM reveals oligomeric isomers of a multienzyme complex and assembly mechanics. J Struct Biol X, 7, 2023
4KKX	Crystal structure of Tryptophan Synthase from Salmonella typhimurium with 2-aminophenol quinonoid in the beta site and the F6 inhibitor in the alpha site 分子名称: 1,2-ETHANEDIOL, 2-{[4-(TRIFLUOROMETHOXY)BENZOYL]AMINO}ETHYL DIHYDROGEN PHOSPHATE, DI(HYDROXYETHYL)ETHER, ... 著者 Hilario, E, Niks, D, Dunn, M.F, Mueller, L.J, Fan, L. 登録日 2013-05-06 公開日 2014-01-01 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.77 Å) 主引用文献 Allostery and substrate channeling in the tryptophan synthase bienzyme complex: evidence for two subunit conformations and four quaternary states. Biochemistry, 52, 2013
8SGX	Leishmania tarentolae propionyl-CoA carboxylase (alpha-4-beta-6) 分子名称: 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL, Propionyl-coa carboxylase beta chain, putative, ... 著者 Lee, J.K.J, Liu, Y.T, Hu, J.J, Aphasizheva, I, Aphasizhev, R, Zhou, Z.H. 登録日 2023-04-13 公開日 2023-05-17 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (10.3 Å) 主引用文献 CryoEM reveals oligomeric isomers of a multienzyme complex and assembly mechanics. J Struct Biol X, 7, 2023
4KLN	Structure of p97 N-D1 A232E mutant in complex with ATPgS 分子名称: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Transitional endoplasmic reticulum ATPase 著者 Xia, D, Tang, W.K. 登録日 2013-05-07 公開日 2013-11-13 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.62 Å) 主引用文献 Altered Intersubunit Communication Is the Molecular Basis for Functional Defects of Pathogenic p97 Mutants. J.Biol.Chem., 288, 2013
7N19	DR3 in complex with Aspergillus nidulans NAD-dependent histone deacetylase hst4 peptide 分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Wang, Y, Dai, S. 登録日 2021-05-27 公開日 2021-08-18 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.38 Å) 主引用文献 CD4+ T cells in the lungs of acute sarcoidosis patients recognize an Aspergillus nidulans epitope. J.Exp.Med., 218, 2021
7NHR	Putative transmembrane protein Wzc K540M C1 分子名称: Putative transmembrane protein Wzc 著者 Liu, J.W, Yang, Y, Naismith, J.H. 登録日 2021-02-11 公開日 2021-08-25 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (2.85 Å) 主引用文献 The molecular basis of regulation of bacterial capsule assembly by Wzc. Nat Commun, 12, 2021
8SQQ	Crystal Structure of Bacterioferritin (Bfr) from Brucella abortus (Apo Cubic Form 2, F16L mutant) 分子名称: Bacterioferritin, CHLORIDE ION, PROTOPORPHYRIN IX CONTAINING FE, ... 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2023-05-04 公開日 2023-05-17 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Crystal Structure of Bacterioferritin (Bfr) from Brucella abortus (Apo Cubic Form 2, F16L mutant) To be published

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