PDB: 1556 件ウェブページステータス検索Chemie searchBIRD

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6WDR	Subunit joining exposes nascent pre-40S rRNA for processing and quality control 分子名称: 20S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S10-A, ... 著者 Rai, J, Parker, M.D, Huang, H, Choy, S, Ghalei, H, Johnson, M.C, Karbstein, K, Stroupe, M.E. 登録日 2020-04-01 公開日 2020-09-30 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 An open interface in the pre-80S ribosome coordinated by ribosome assembly factors Tsr1 and Dim1 enables temporal regulation of Fap7. Rna, 27, 2021
6WDB	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure IV-A) 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Loveland, A.B, Demo, G, Korostelev, A.A. 登録日 2020-03-31 公開日 2020-07-01 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Cryo-EM of elongating ribosome with EF-Tu•GTP elucidates tRNA proofreading. Nature, 584, 2020
6WNW	Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA 分子名称: 16S ribosomal RNA, 23s-5s joint ribosomal RNA, 30S ribosomal protein S10, ... 著者 Loveland, A.B, Korostelev, A.A, Mankin, A.S, Huang, S, Aleksashin, N.A, Klepacki, D, Reier, K, Kefi, A, Szal, A, Remme, J, Jaeger, L, Vazquez-Laslop, N. 登録日 2020-04-23 公開日 2020-06-24 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Ribosome engineering reveals the importance of 5S rRNA autonomy for ribosome assembly. Nat Commun, 11, 2020
6DZK	Cryo-EM Structure of Mycobacterium smegmatis C(minus) 30S ribosomal subunit with MPY 分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Sharma, M.R, Li, Y, Korripella, R, Yang, Y, Kaushal, P.S, Lin, Q, Wade, J.T, Gray, A.G, Derbyshire, K.M, Agrawal, R.K, Ojha, A. 登録日 2018-07-05 公開日 2018-09-19 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Zinc depletion induces ribosome hibernation in mycobacteria. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6DZI	Cryo-EM Structure of Mycobacterium smegmatis 70S C(minus) ribosome 70S-MPY complex 分子名称: 16S rRNA, 23 S rRNA (3119-MER), 30S ribosomal protein S10, ... 著者 Sharma, M.R, Li, Y, Korripella, R, Yang, Y, Kaushal, P.S, Lin, Q, Wade, J.T, Gray, A.G, Derbyshire, K.M, Agrawal, R.K, Ojha, A. 登録日 2018-07-05 公開日 2018-09-26 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.46 Å) 主引用文献 Zinc depletion induces ribosome hibernation in mycobacteria. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6ERI	Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10 alpha, ... 著者 Perez Borema, A, Aibara, S, Paul, B, Tobiasson, V, Kimanius, D, Forsberg, B.O, Wallden, K, Lindahl, E, Amunts, A. 登録日 2017-10-18 公開日 2018-04-18 最終更新日 2024-11-13 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor. Nat Plants, 4, 2018
6ENJ	Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P) 分子名称: 16S ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... 著者 Huter, P, Wilson, D.N. 登録日 2017-10-05 公開日 2017-11-22 最終更新日 2019-10-30 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Structural Basis for Polyproline-Mediated Ribosome Stalling and Rescue by the Translation Elongation Factor EF-P. Mol. Cell, 68, 2017
6ENF	Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-P 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Huter, P, Arenz, S, Wilson, D.N. 登録日 2017-10-04 公開日 2017-11-22 最終更新日 2024-10-23 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structural Basis for Polyproline-Mediated Ribosome Stalling and Rescue by the Translation Elongation Factor EF-P. Mol. Cell, 68, 2017
6FEC	Human cap-dependent 48S pre-initiation complex 分子名称: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ... 著者 Schaffitzel, C, Schaffitzel, C. 登録日 2017-12-31 公開日 2018-03-14 最終更新日 2024-10-16 実験手法 ELECTRON MICROSCOPY (6.3 Å) 主引用文献 Structure of a human cap-dependent 48S translation pre-initiation complex. Nucleic Acids Res., 46, 2018
6FKR	Crystal structure of the dolphin proline-rich antimicrobial peptide Tur1A bound to the Thermus thermophilus 70S ribosome 分子名称: 16 ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Mardirossian, M, Perebaskine, N, Benincasa, M, Gambato, S, Hofmann, S, Huter, P, Muller, C, Hilpert, K, Innis, C.A, Tossi, A, Wilson, D.N. 登録日 2018-01-24 公開日 2018-03-28 最終更新日 2024-04-24 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 The Dolphin Proline-Rich Antimicrobial Peptide Tur1A Inhibits Protein Synthesis by Targeting the Bacterial Ribosome. Cell Chem Biol, 25, 2018
6FYX	Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C1) 分子名称: 18S ribosomal RNA, 40S ribosomal protein S0, 40S ribosomal protein S1, ... 著者 Llacer, J.L, Hussain, T, Gordiyenko, Y, Ramakrishnan, V. 登録日 2018-03-12 公開日 2018-12-05 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Translational initiation factor eIF5 replaces eIF1 on the 40S ribosomal subunit to promote start-codon recognition. Elife, 7, 2018
6G5I	Cryo-EM structure of a late human pre-40S ribosomal subunit - State R 分子名称: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ... 著者 Ameismeier, M, Cheng, J, Berninghausen, O, Beckmann, R. 登録日 2018-03-29 公開日 2018-06-06 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Visualizing late states of human 40S ribosomal subunit maturation. Nature, 558, 2018
6G53	Cryo-EM structure of a late human pre-40S ribosomal subunit - State E 分子名称: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ... 著者 Ameismeier, M, Cheng, J, Berninghausen, O, Beckmann, R. 登録日 2018-03-28 公開日 2018-06-06 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 Visualizing late states of human 40S ribosomal subunit maturation. Nature, 558, 2018
6FXC	The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Matzov, D, Aibara, S, Zimmerman, E, Bashan, A, Kidmose, R, Amunts, A, Yonath, A. 登録日 2018-03-08 公開日 2018-03-21 最終更新日 2024-11-13 実験手法 ELECTRON MICROSCOPY (6.76 Å) 主引用文献 The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus. Nat Commun, 8, 2017
6D90	Mammalian 80S ribosome with a double translocated CrPV-IRES, P-site tRNA and eRF1. 分子名称: 18S rRNA, 28S rRNA, 5.8S rRNA, ... 著者 Pisareva, V.P, Pisarev, A.V, Fernandez, I.S. 登録日 2018-04-27 公開日 2018-06-06 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Dual tRNA mimicry in the Cricket Paralysis Virus IRES uncovers an unexpected similarity with the Hepatitis C Virus IRES. Elife, 7, 2018
6G18	Cryo-EM structure of a late human pre-40S ribosomal subunit - State C 分子名称: 40S ribosomal protein S11, 40S ribosomal protein S12, 40S ribosomal protein S13, ... 著者 Ameismeier, M, Cheng, J, Berninghausen, O, Beckmann, R. 登録日 2018-03-20 公開日 2018-06-06 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Visualizing late states of human 40S ribosomal subunit maturation. Nature, 558, 2018
6G4S	Cryo-EM structure of a late human pre-40S ribosomal subunit - State B 分子名称: 40S ribosomal protein S11, 40S ribosomal protein S13, 40S ribosomal protein S14, ... 著者 Ameismeier, M, Cheng, J, Berninghausen, O, Beckmann, R. 登録日 2018-03-28 公開日 2018-06-06 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Visualizing late states of human 40S ribosomal subunit maturation. Nature, 558, 2018
6ENU	Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P) 分子名称: 16S ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... 著者 Huter, P, Arenz, S, Wilson, D.N. 登録日 2017-10-06 公開日 2017-11-22 最終更新日 2018-01-31 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural Basis for Polyproline-Mediated Ribosome Stalling and Rescue by the Translation Elongation Factor EF-P. Mol. Cell, 68, 2017
6EML	Cryo-EM structure of a late pre-40S ribosomal subunit from Saccharomyces cerevisiae 分子名称: 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, 40S ribosomal protein S11-A, ... 著者 Heuer, A, Thomson, E, Schmidt, C, Berninghausen, O, Becker, T, Hurt, E, Beckmann, R. 登録日 2017-10-02 公開日 2017-11-29 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Cryo-EM structure of a late pre-40S ribosomal subunit fromSaccharomyces cerevisiae. Elife, 6, 2017
6G5H	Cryo-EM structure of a late human pre-40S ribosomal subunit - Mature 分子名称: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ... 著者 Ameismeier, M, Cheng, J, Berninghausen, O, Beckmann, R. 登録日 2018-03-29 公開日 2018-06-06 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Visualizing late states of human 40S ribosomal subunit maturation. Nature, 558, 2018
6DTI	Structure of the Thermus thermophilus 30S ribosomal subunit complexed with an unmodifed anticodon stem loop (ASL) of Escherichia coli transfer RNA Arginine 2 (TRNAARG2) bound to an mRNA with an CGU-codon in the A-site and paromomycin 分子名称: 16s rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Cantara, W.A, DeMirci, H, Agris, P.F. 登録日 2018-06-16 公開日 2019-04-24 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (3.54 Å) 主引用文献 A Structural Basis for Restricted Codon Recognition Mediated by 2-thiocytidine in tRNA Containing a Wobble Position Inosine. J.Mol.Biol., 432, 2020
6DNC	E.coli RF1 bound to E.coli 70S ribosome in response to UAU sense A-site codon 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Svidritskiy, E, Demo, G, Korostelev, A.A. 登録日 2018-06-06 公開日 2018-07-04 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Mechanism of premature translation termination on a sense codon. J. Biol. Chem., 293, 2018
6FAI	Structure of a eukaryotic cytoplasmic pre-40S ribosomal subunit 分子名称: 20S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ... 著者 Scaiola, A, Pena, C, Weisser, M, Boehringer, D, Leibundgut, M, Klingauf-Nerurkar, P, Gerhardy, S, Panse, V.G, Ban, N. 登録日 2017-12-15 公開日 2018-02-28 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structure of a eukaryotic cytoplasmic pre-40S ribosomal subunit. EMBO J., 37, 2018
6G4W	Cryo-EM structure of a late human pre-40S ribosomal subunit - State A 分子名称: 18S ribosomal RNA, 40S ribosomal protein S11, 40S ribosomal protein S13, ... 著者 Ameismeier, M, Cheng, J, Berninghausen, O, Beckmann, R. 登録日 2018-03-28 公開日 2018-06-06 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 Visualizing late states of human 40S ribosomal subunit maturation. Nature, 558, 2018
6FYY	Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C2) 分子名称: 18S ribosomal RNA, 40S ribosomal protein S0, 40S ribosomal protein S1, ... 著者 Llacer, J.L, Hussain, T, Gordiyenko, Y, Ramakrishnan, V. 登録日 2018-03-12 公開日 2018-12-05 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (3.02 Å) 主引用文献 Translational initiation factor eIF5 replaces eIF1 on the 40S ribosomal subunit to promote start-codon recognition. Elife, 7, 2018

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