Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7BSD
DownloadVisualize
BU of 7bsd by Molmil
Complex structure of 1G5.3 Fab bound to ZIKV NS1c
分子名称: 1G5.3 Fab Heavy Chain, 1G5.3 Fab Light Chain, NS1C
著者Song, H, Qi, J, Gao, F.G.
登録日2020-03-30
公開日2020-12-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.53 Å)
主引用文献A broadly protective antibody that targets the flavivirus NS1 protein.
Science, 371, 2021
7NXU
DownloadVisualize
BU of 7nxu by Molmil
Crystal structure of the tick-borne encephalitis virus NS3 helicase in complex with ADP-Pi
分子名称: ADENOSINE-5'-DIPHOSPHATE, MANGANESE (II) ION, NS3 helicase domain, ...
著者Anindita, P.D, Grinkevich, P, Franta, Z.
登録日2021-03-19
公開日2022-02-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Mechanistic insight into the RNA-stimulated ATPase activity of tick-borne encephalitis virus helicase.
J.Biol.Chem., 298, 2022
8QDJ
DownloadVisualize
BU of 8qdj by Molmil
Ntaya virus methyltransferase in complex wih Sinefungin
分子名称: Ntaya virus methyltransferase, SINEFUNGIN, SULFATE ION
著者Krejcova, K, Boura, E, Klima, M.
登録日2023-08-29
公開日2024-09-04
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural and functional insights in flavivirus NS5 proteins gained by the structure of Ntaya virus polymerase and methyltransferase.
Structure, 32, 2024
7OJ4
DownloadVisualize
BU of 7oj4 by Molmil
Crystal structure of apo NS3 helicase from tick-borne encephalitis virus
分子名称: NS3 helicase domain
著者Anindita, P.D, Havlickova, P, Kascakova, B, Grinkevich, P, Brynda, J, Franta, Z.
登録日2021-05-13
公開日2022-03-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.828 Å)
主引用文献Mechanistic insight into the RNA-stimulated ATPase activity of tick-borne encephalitis virus helicase.
J.Biol.Chem., 298, 2022
7P4L
DownloadVisualize
BU of 7p4l by Molmil
Crystal structure of the trimeric ectodomain of archaeal Fusexin1 (Fsx1)
分子名称: CALCIUM ION, CHLORIDE ION, Fusexin1, ...
著者Nishio, S, Tunyasuvunakool, K, Jumper, J, De Sanctis, D, Jovine, L.
登録日2021-07-12
公開日2022-07-13
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Discovery of archaeal fusexins homologous to eukaryotic HAP2/GCS1 gamete fusion proteins.
Nat Commun, 13, 2022
5O19
DownloadVisualize
BU of 5o19 by Molmil
Japanese encephalitis virus non-structural protein 1 C-terminal domain
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Genome polyprotein, SULFATE ION
著者Poonsiri, T, Wright, G.S.A, Antonyuk, S.V.
登録日2017-05-18
公開日2018-01-24
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Study of the C-Terminal Domain of Nonstructural Protein 1 from Japanese Encephalitis Virus.
J. Virol., 92, 2018
5OW2
DownloadVisualize
BU of 5ow2 by Molmil
Japanese encephalitis virus capsid protein
分子名称: 1,2-ETHANEDIOL, CITRATE ANION, capsid protein
著者Poonsiri, T, Wright, G.S.A, Antonyuk, S.V.
登録日2017-08-30
公開日2018-10-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Crystal Structure of the Japanese Encephalitis Virus Capsid Protein.
Viruses, 11, 2019
7LYG
DownloadVisualize
BU of 7lyg by Molmil
Zika virus RNA promoter stem-loop A with tRNA-scaffold
分子名称: RNA promoter stem-loop A fused with tRNA
著者Lee, E.H, Choi, K.H.
登録日2021-03-06
公開日2021-05-12
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.804 Å)
主引用文献Structures of flavivirus RNA promoters suggest two binding modes with NS5 polymerase.
Nat Commun, 12, 2021
6QSN
DownloadVisualize
BU of 6qsn by Molmil
Crystal structure of Yellow fever virus polymerase NS5A
分子名称: Genome polyprotein, S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION, ...
著者Boura, E, Dubankova, A.
登録日2019-02-21
公開日2019-10-16
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (3.004 Å)
主引用文献Structure of the yellow fever NS5 protein reveals conserved drug targets shared among flaviviruses.
Antiviral Res., 169, 2019
7L9E
DownloadVisualize
BU of 7l9e by Molmil
Crystal structure of apo-alpha glucosidase
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Karade, S.S, Mariuzza, R.A.
登録日2021-01-03
公開日2021-12-29
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献N-Substituted Valiolamine Derivatives as Potent Inhibitors of Endoplasmic Reticulum alpha-Glucosidases I and II with Antiviral Activity.
J.Med.Chem., 64, 2021
6S1Z
DownloadVisualize
BU of 6s1z by Molmil
Crystal structure of Anopheles gambiae AnoACE2 in complex with fosinoprilat
分子名称: Angiotensin-converting enzyme, ZINC ION, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Cozier, G.E, Acharya, K.R, Cashman, J.S.
登録日2019-06-19
公開日2019-11-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of angiotensin-converting enzyme from Anopheles gambiae in its native form and with a bound inhibitor.
Biochem.J., 476, 2019
6S1Y
DownloadVisualize
BU of 6s1y by Molmil
Crystal structure of Anopheles gambiae AnoACE2 in complex with gamma-Polyglutamic Acid.
分子名称: (2~{S})-2-[[(4~{S})-4-azanyl-5-oxidanyl-5-oxidanylidene-pentanoyl]amino]pentanedioic acid, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Cozier, G.E, Acharya, K.R, Cashman, J.S.
登録日2019-06-19
公開日2019-11-13
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structures of angiotensin-converting enzyme from Anopheles gambiae in its native form and with a bound inhibitor.
Biochem.J., 476, 2019
8BIN
DownloadVisualize
BU of 8bin by Molmil
Crystal structure of human Ephrin type-A receptor 2 (EPHA2) Kinase domain in complex with MR21
分子名称: 1,2-ETHANEDIOL, 8-(4-azanylbutyl)-6-(2-chlorophenyl)-2-(methylamino)pyrido[2,3-d]pyrimidin-7-one, Ephrin type-A receptor 2
著者Zhubi, R, Rak, M, Knapp, S, Kraemer, A, Structural Genomics Consortium (SGC)
登録日2022-11-02
公開日2022-11-23
最終更新日2024-08-21
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Back-Pocket Optimization of 2-Aminopyrimidine-Based Macrocycles Leads to Potent EPHA2/GAK Kinase Inhibitors.
J.Med.Chem., 67, 2024
7ZIU
DownloadVisualize
BU of 7ziu by Molmil
Crystal structure of Ntaya virus NS5 polymerase domain
分子名称: Genome polyprotein, ZINC ION
著者Krejcova, K, Klima, M, Boura, E.
登録日2022-04-08
公開日2023-04-19
最終更新日2024-09-04
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural and functional insights in flavivirus NS5 proteins gained by the structure of Ntaya virus polymerase and methyltransferase.
Structure, 32, 2024
6C44
DownloadVisualize
BU of 6c44 by Molmil
Zika virus capsid protein
分子名称: Capsid protein
著者Morando, M.A, Barbosa, G.M, Cruz-Oliveira, C, Da Poian, A.T, Almeida, F.C.L.
登録日2018-01-11
公開日2019-01-16
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Dynamics of Zika Virus Capsid Protein in Solution: The Properties and Exposure of the Hydrophobic Cleft Are Controlled by the alpha-Helix 1 Sequence.
Biochemistry, 58, 2019
5U4W
DownloadVisualize
BU of 5u4w by Molmil
Cryo-EM Structure of Immature Zika Virus
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, E protein, M protein, ...
著者Mangala Prasad, V, Miller, A.S, Klose, T, Sirohi, D, Buda, G, Jiang, W, Kuhn, R.J, Rossmann, M.G.
登録日2016-12-06
公開日2017-01-11
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (9.1 Å)
主引用文献Structure of the immature Zika virus at 9 angstrom resolution.
Nat. Struct. Mol. Biol., 24, 2017
5U04
DownloadVisualize
BU of 5u04 by Molmil
Crystal structure of Zika virus NS5 RNA-dependent RNA polymerase
分子名称: PHOSPHATE ION, ZINC ION, Zika Virus NS5 RdRp
著者Godoy, A.S, Lima, G.M.A, Oliveira, K.I.Z, Torres, N.U, Maluf, F.V, Guido, R.V.C, Oliva, G.
登録日2016-11-22
公開日2017-02-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of Zika virus NS5 RNA-dependent RNA polymerase.
Nat Commun, 8, 2017
1Z66
DownloadVisualize
BU of 1z66 by Molmil
NMR solution structure of domain III of E-protein of tick-borne Langat flavivirus (no RDC restraints)
分子名称: Major envelope protein E
著者Mukherjee, M, Dutta, K, White, M.A, Cowburn, D, Fox, R.O.
登録日2005-03-21
公開日2006-03-28
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献NMR solution structure and backbone dynamics of domain III of the E protein of tick-borne Langat flavivirus suggests a potential site for molecular recognition.
Protein Sci., 15, 2006
1ZTX
DownloadVisualize
BU of 1ztx by Molmil
West Nile Virus Envelope Protein DIII in complex with neutralizing E16 antibody Fab
分子名称: Envelope protein, Heavy Chain of E16 Antibody, Light Chain of E16 Antibody
著者Nybakken, G.E, Oliphant, T, Diamond, M.S, Fremont, D.H.
登録日2005-05-27
公開日2005-10-04
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis of West Nile virus neutralization by a therapeutic antibody.
Nature, 437, 2005
4OIE
DownloadVisualize
BU of 4oie by Molmil
West Nile Virus Non-structural Protein NS1
分子名称: GLYCEROL, NON-STRUCTURAL PROTEIN NS1
著者Edeling, M.A, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2014-01-19
公開日2014-03-05
最終更新日2014-04-23
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural basis of Flavivirus NS1 assembly and antibody recognition.
Proc.Natl.Acad.Sci.USA, 111, 2014
3ES5
DownloadVisualize
BU of 3es5 by Molmil
Crystal Structure of Partitivirus (PsV-F)
分子名称: Putative capsid protein
著者Pan, J, Dong, L, Lin, L, Ochoa, W.F, Sinkovits, R.S, Havens, W.M, Nibert, M.L, Baker, T.S, Ghabrial, S.A, Tao, Y.J.
登録日2008-10-03
公開日2009-03-10
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Atomic structure reveals the unique capsid organization of a dsRNA virus.
Proc.Natl.Acad.Sci.USA, 106, 2009
2XR6
DownloadVisualize
BU of 2xr6 by Molmil
Crystal structure of the complex of the carbohydrate recognition domain of human DC-SIGN with pseudo trimannoside mimic.
分子名称: 2-AZIDOETHANOL, CALCIUM ION, CD209 ANTIGEN, ...
著者Thepaut, M, Suitkeviciute, I, Sattin, S, Reina, J, Bernardi, A, Fieschi, F.
登録日2010-09-10
公開日2011-10-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Unique Dc-Sign Clustering Activity of a Small Glycomimetic: A Lesson for Ligand Design.
Acs Chem.Biol., 9, 2014
3I50
DownloadVisualize
BU of 3i50 by Molmil
Crystal structure of the West Nile Virus envelope glycoprotein in complex with the E53 antibody Fab
分子名称: Envelope glycoprotein, murine heavy chain (IgG3) of E53 monoclonal antibody Fab, murine kappa light chain of E53 monoclonal antibody Fab
著者Nybakken, G.E, Warren, J.T, Chen, B.R, Nelson, C.A, Fremont, D.H.
登録日2009-07-03
公開日2009-10-27
最終更新日2013-09-25
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis for the preferential recognition of immature flaviviruses by a fusion-loop antibody.
Embo J., 28, 2009
2XR5
DownloadVisualize
BU of 2xr5 by Molmil
Crystal structure of the complex of the carbohydrate recognition domain of human DC-SIGN with pseudo dimannoside mimic.
分子名称: CALCIUM ION, CD209 ANTIGEN, CHLORIDE ION, ...
著者Thepaut, M, Suitkeviciute, I, Sattin, S, Reina, J, Bernardi, A, Fieschi, F.
登録日2010-09-10
公開日2011-10-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Structure of a Glycomimetic Ligand in the Carbohydrate Recognition Domain of C-Type Lectin Dc-Sign. Structural Requirements for Selectivity and Ligand Design.
J.Am.Chem.Soc., 135, 2013
2WV9
DownloadVisualize
BU of 2wv9 by Molmil
Crystal Structure of the NS3 protease-helicase from Murray Valley encephalitis virus
分子名称: FLAVIVIRIN PROTEASE NS2B REGULATORY SUBUNIT, FLAVIVIRIN PROTEASE NS3 CATALYTIC SUBUNIT
著者Assenberg, R, Mastrangelo, E, Walter, T.S, Verma, A, Milani, M, Owens, R.J, Stuart, D.I, Grimes, J.M, Mancini, E.J.
登録日2009-10-15
公開日2009-12-01
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Crystal Structure of a Novel Conformational State of the Flavivirus Ns3 Protein: Implications for Polyprotein Processing and Viral Replication.
J.Virol., 83, 2009

224931

件を2024-09-11に公開中

PDB statisticsPDBj update infoContact PDBjnumon