PDB: 46188 件ウェブページステータス検索Chemie searchBIRD

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4J6X	Crystal structure of Hfq from Pseudomonas aeruginosa in complex with UTP 分子名称: Protein hfq, URIDINE 5'-TRIPHOSPHATE 著者 Nikulin, A.D, Murina, V, Lekontseva, N. 登録日 2013-02-12 公開日 2013-07-31 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.222 Å) 主引用文献 Hfq binds ribonucleotides in three different RNA-binding sites. Acta Crystallogr.,Sect.D, 69, 2013
2FR3	Crystal Structure of Cellular Retinoic Acid Binding Protein Type II in Complex with All-Trans-Retinoic Acid at 1.48 Angstroms Resolution 分子名称: ACETATE ION, Cellular retinoic acid binding protein 2, RETINOIC ACID 著者 Vaezeslami, S, Geiger, J.H. 登録日 2006-01-18 公開日 2006-09-19 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.48 Å) 主引用文献 The structure of Apo-wild-type cellular retinoic acid binding protein II at 1.4 A and its relationship to ligand binding and nuclear translocation. J.Mol.Biol., 363, 2006
2FS7	Crystal Structure of Apo-Cellular Retinoic Acid Binding Protein Type II At 1.55 Angstroms Resolution 分子名称: ACETATE ION, CHLORIDE ION, Cellular retinoic acid-binding protein 2 著者 Vaezeslami, S, Geiger, J.H. 登録日 2006-01-21 公開日 2006-09-19 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 The structure of Apo-wild-type cellular retinoic acid binding protein II at 1.4 A and its relationship to ligand binding and nuclear translocation. J.Mol.Biol., 363, 2006
4J8O	SET7/9 in complex with TAF10K189A peptide and AdoHcy 分子名称: Histone-lysine N-methyltransferase SETD7, S-ADENOSYL-L-HOMOCYSTEINE, Transcription initiation factor TFIID subunit 10 著者 Horowitz, S, Trievel, R.C. 登録日 2013-02-14 公開日 2014-01-08 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.63 Å) 主引用文献 Conservation and functional importance of carbon-oxygen hydrogen bonding in AdoMet-dependent methyltransferases. J.Am.Chem.Soc., 135, 2013
2YY0	Crystal Structure of MS0802, c-Myc-1 binding protein domain from Homo sapiens 分子名称: C-Myc-binding protein 著者 Xie, Y, Wang, H, Ihsanawati, K.T, Kishishita, S, Takemoto, C, Shirozu, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2007-04-27 公開日 2008-04-29 最終更新日 2024-06-26 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 crystal structure of c-Myc-1 binding protein domain from Homo sapiens To be Published
2FEX	The Crystal Structure of DJ-1 Superfamily Protein Atu0886 from Agrobacterium tumefaciens 分子名称: GLYCEROL, SULFATE ION, conserved hypothetical protein 著者 Cymborowski, M.T, Wang, S, Chruszcz, M, Shumilin, I, Gu, J, Xu, X, Edwards, A.M, Savchenko, A, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG) 登録日 2005-12-16 公開日 2006-01-31 最終更新日 2022-04-13 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 The Crystal Structure of DJ-1 Superfamily Protein Atu0886 from Agrobacterium tumefaciens To be Published
2YHT	Crystal structure of Hfq riboregulator from E. coli (P1 space group) 分子名称: PROTEIN HFQ 著者 Basquin, J, Sauter, C. 登録日 2011-05-06 公開日 2011-11-16 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Exploiting Protein Engineering and Crystal Polymorphism for Successful X-Ray Structure Determination Cryst.Growth Des., 11, 2011
4NYA	Crystal structure of the E. coli thiM riboswitch in complex with 5-(azidomethyl)-2-methylpyrimidin-4-amine 分子名称: 5-(azidomethyl)-2-methylpyrimidin-4-amine, MAGNESIUM ION, thiM TPP riboswitch 著者 Warner, K.D, Homan, P, Weeks, K.M, Smith, A.G, Abell, C, Ferre-D'Amare, A.R. 登録日 2013-12-10 公開日 2014-06-04 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Validating Fragment-Based Drug Discovery for Biological RNAs: Lead Fragments Bind and Remodel the TPP Riboswitch Specifically. Chem.Biol., 21, 2014
2YC0	FACTOR INHIBITING HIF-1 ALPHA IN COMPLEX WITH R-2-HYDROXYGLUTARATE 分子名称: (2R)-2-hydroxypentanedioic acid, FE (II) ION, GLYCEROL, ... 著者 Chowdhury, R, Clifton, I.J, Schofield, C.J. 登録日 2011-03-10 公開日 2011-03-30 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 The oncometabolite 2-hydroxyglutarate inhibits histone lysine demethylases. EMBO Rep., 12, 2011
2YF3	Crystal structure of DR2231, the MazG-like protein from Deinococcus radiodurans, complex with manganese 分子名称: GLYCEROL, MANGANESE (II) ION, MAZG-LIKE NUCLEOSIDE TRIPHOSPHATE PYROPHOSPHOHYDROLASE, ... 著者 Goncalves, A.M.D, deSanctis, D, McSweeney, S.M. 登録日 2011-04-01 公開日 2011-07-06 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural and Functional Insights Into Dr2231 Protein, the Mazg-Like Nucleoside Triphosphate Pyrophosphohydrolase from Deinococcus Radiodurans. J.Biol.Chem., 286, 2011
4I39	Structures of ICT and PR1 intermediates from time-resolved laue crystallography collected at 14ID-B, APS 分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein 著者 Jung, Y.O, Lee, J.H, Kim, J, Schmidt, M, Vukica, S, Moffat, K, Ihee, H. 登録日 2012-11-26 公開日 2013-03-20 最終更新日 2017-11-15 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Volume-conserving trans-cis isomerization pathways in photoactive yellow protein visualized by picosecond X-ray crystallography NAT.CHEM., 5, 2013
6JKY	Crystal structure of MvcA-UBE2N-Ub complex from Legionella pneumophila 分子名称: MvcA, Ub, Ubiquitin-conjugating enzyme E2 N 著者 Ouyang, S.Y, Guan, H. 登録日 2019-03-03 公開日 2019-12-18 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.454 Å) 主引用文献 Legionella pneumophila regulates the activity of UBE2N by deamidase-mediated deubiquitination. Embo J., 39, 2020
2ZOH	X-ray Crystal Structure of Photoactive Yellow Protein, Wild type, at 295K 分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein 著者 Yamaguchi, S. 登録日 2008-05-20 公開日 2009-03-24 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.25 Å) 主引用文献 Low-barrier hydrogen bond in photoactive yellow protein Proc.Natl.Acad.Sci.USA, 106, 2009
6J6H	Cryo-EM structure of the yeast B*-a1 complex at an average resolution of 3.6 angstrom 分子名称: ACT1 pre-mRNA, GUANOSINE-5'-TRIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, ... 著者 Wan, R, Bai, R, Yan, C, Lei, J, Shi, Y. 登録日 2019-01-15 公開日 2019-04-24 最終更新日 2020-10-14 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structures of the Catalytically Activated Yeast Spliceosome Reveal the Mechanism of Branching. Cell, 177, 2019
2Z5U	Crystal structure of Lysine-specific histone demethylase 1 分子名称: FAD-trans-2-Phenylcyclopropylamine Adduct, Lysine-specific histone demethylase 1 著者 Mimasu, S, Sengoku, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2007-07-17 公開日 2008-04-01 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Crystal structure of histone demethylase LSD1 and tranylcypromine at 2.25 A Biochem.Biophys.Res.Commun., 366, 2008
4N7O	Capturing the haemoglobin allosteric transition in a single crystal form; Crystal structure of half-liganded human haemoglobin with phosphate at 2.5 A resolution. 分子名称: Hemoglobin subunit alpha, Hemoglobin subunit beta, PROTOPORPHYRIN IX CONTAINING FE, ... 著者 Sugiyama, K, Shibayama, N, Park, S.Y. 登録日 2013-10-16 公開日 2014-04-02 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.502 Å) 主引用文献 Capturing the hemoglobin allosteric transition in a single crystal form J.Am.Chem.Soc., 136, 2014
4JRI	Crystal Structure of Escherichia coli Hfq Proximal Edge Mutant 分子名称: Protein hfq 著者 Robinson, K.E, Orans, J. 登録日 2013-03-21 公開日 2013-12-11 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.829 Å) 主引用文献 Mapping Hfq-RNA interaction surfaces using tryptophan fluorescence quenching. Nucleic Acids Res., 42, 2014
6J6Q	Cryo-EM structure of the yeast B*-b2 complex at an average resolution of 3.7 angstrom 分子名称: GUANOSINE-5'-TRIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, MAGNESIUM ION, ... 著者 Wan, R, Bai, R, Yan, C, Lei, J, Shi, Y. 登録日 2019-01-15 公開日 2019-04-24 最終更新日 2020-10-14 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Structures of the Catalytically Activated Yeast Spliceosome Reveal the Mechanism of Branching. Cell, 177, 2019
6J6N	Cryo-EM structure of the yeast B*-b1 complex at an average resolution of 3.86 angstrom 分子名称: GUANOSINE-5'-TRIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, MAGNESIUM ION, ... 著者 Wan, R, Bai, R, Yan, C, Lei, J, Shi, Y. 登録日 2019-01-15 公開日 2019-04-24 最終更新日 2020-10-14 実験手法 ELECTRON MICROSCOPY (3.86 Å) 主引用文献 Structures of the Catalytically Activated Yeast Spliceosome Reveal the Mechanism of Branching. Cell, 177, 2019
4IJG	Crystal structure of monomeric bacteriophytochrome 分子名称: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, Bacteriophytochrome, DI(HYDROXYETHYL)ETHER, ... 著者 Auldridge, M.E. 登録日 2012-12-21 公開日 2013-12-25 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.701 Å) 主引用文献 Origins of fluorescence in evolved bacteriophytochromes. J.Biol.Chem., 289, 2014
6JON	Crystal structures of phage NrS-1 N300-dNTPs-Mg2+ complex provide molecular mechanisms for substrate specificity 分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, MAGNESIUM ION, Primase 著者 Guo, H.J, Li, M.J, Wu, H, Yu, F, He, J.H. 登録日 2019-03-22 公開日 2019-06-26 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.34 Å) 主引用文献 Crystal structures of phage NrS-1 N300-dNTPs-Mg2+complex provide molecular mechanisms for substrate specificity. Biochem.Biophys.Res.Commun., 515, 2019
6JOP	Crystal structures of phage NrS-1 N300-dNTPs-Mg2+ complex provide molecular mechanisms for substrate specificity 分子名称: MAGNESIUM ION, Primase, THYMIDINE-5'-TRIPHOSPHATE 著者 Guo, H.J, Li, M.J, Wu, H, Yu, F, He, J.H. 登録日 2019-03-22 公開日 2019-06-26 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.353 Å) 主引用文献 Crystal structures of phage NrS-1 N300-dNTPs-Mg2+complex provide molecular mechanisms for substrate specificity. Biochem.Biophys.Res.Commun., 515, 2019
3CB5	Crystal Structure of the S. pombe Peptidase Homology Domain of FACT complex subunit Spt16 (form A) 分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FACT complex subunit spt16 著者 Stuwe, T, Hothorn, M, Lejeune, E, Bortfeld-Miller, M, Scheffzek, K, Ladurner, A.G. 登録日 2008-02-21 公開日 2008-06-17 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 The FACT Spt16 "peptidase" domain is a histone H3-H4 binding module Proc.Natl.Acad.Sci.USA, 105, 2008
7K5J	Structure of an E1-E2-ubiquitin thioester mimetic 分子名称: ADENOSINE MONOPHOSPHATE, Ubiquitin, Ubiquitin-activating enzyme E1 1, ... 著者 Yuan, L, Lv, Z, Olsen, S.K. 登録日 2020-09-16 公開日 2021-04-28 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (3.42 Å) 主引用文献 Crystal structures of an E1-E2-ubiquitin thioester mimetic reveal molecular mechanisms of transthioesterification. Nat Commun, 12, 2021
3C65	Crystal Structure of Bacillus stearothermophilus UvrC 5' endonuclease domain 分子名称: UvrABC system protein C 著者 Pakotiprapha, D, Bowman, B.R, Mueller, A.A, Inuzuka, Y, Verdine, G.L. 登録日 2008-02-02 公開日 2008-08-05 最終更新日 2017-10-25 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal Structure of Bacillus stearothermophilus UvrC 5' endonuclease domain To be Published

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