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2D4L
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Crystal structure of truncated in C-terminal M-PMV dUTPase
分子名称: DU
著者Nemeth, V, Barabas, O, Vertessy, G.B.
登録日2005-10-20
公開日2006-11-07
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Flexible segments modulate co-folding of dUTPase and nucleocapsid proteins.
Nucleic Acids Res., 35, 2007
2D4M
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Crystal Structure of apo M-PMV dUTPase
分子名称: DU
著者Nemeth, V, Barabas, O, Vertessy, G.B.
登録日2005-10-20
公開日2006-11-21
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Flexible segments modulate co-folding of dUTPase and nucleocapsid proteins.
Nucleic Acids Res., 35, 2007
2D4N
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BU of 2d4n by Molmil
Crystal Structure of M-PMV dUTPase complexed with dUPNPP, substrate analogue
分子名称: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DU, ...
著者Nemeth, V, Barabas, O, Vertessy, G.B.
登録日2005-10-20
公開日2006-11-21
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Flexible segments modulate co-folding of dUTPase and nucleocapsid proteins.
Nucleic Acids Res., 35, 2007
2D4O
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BU of 2d4o by Molmil
Crystal structure of TTHA1254 (I68M mutant) from Thermus thermophilus HB8
分子名称: hypothetical protein TTHA1254
著者Mizohata, E, Uchikubo, T, Kinoshita, Y, Terada, T, Shirouzu, M, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-10-21
公開日2006-04-21
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of TTHA1254 (I68M mutant) from Thermus thermophilus HB8
To be Published
2D4P
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BU of 2d4p by Molmil
Crystal structure of TTHA1254 (wild type) from Thermus thermophilus HB8
分子名称: hypothetical protein TTHA1254
著者Mizohata, E, Uchikubo, T, Kinoshita, Y, Terada, T, Shirouzu, M, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-10-21
公開日2006-04-21
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of TTHA1254 (wild type) from Thermus thermophilus HB8
To be Published
2D4Q
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Crystal structure of the Sec-PH domain of the human neurofibromatosis type 1 protein
分子名称: Neurofibromin, OXTOXYNOL-10, PYROPHOSPHATE 2-
著者D'angelo, I, Welti, S, Bonneau, F, Scheffzek, K.
登録日2005-10-22
公開日2006-03-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A novel bipartite phospholipid-binding module in the neurofibromatosis type 1 protein
Embo Rep., 7, 2006
2D4R
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Crystal structure of TTHA0849 from Thermus thermophilus HB8
分子名称: SULFATE ION, hypothetical protein TTHA0849
著者Nakabayashi, M, Shibata, N, Kuramitsu, S, Higuchi, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-10-23
公開日2005-12-13
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of a conserved hypothetical protein, TTHA0849 from Thermus thermophilus HB8, at 2.4 A resolution: a putative member of the StAR-related lipid-transfer (START) domain superfamily.
Acta Crystallogr.,Sect.F, 61, 2005
2D4U
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BU of 2d4u by Molmil
Crystal Structure of the ligand binding domain of the bacterial serine chemoreceptor Tsr
分子名称: Methyl-accepting chemotaxis protein I
著者Imada, K, Tajima, H, Namba, K, Sakuma, M, Homma, M, Kawagishi, I.
登録日2005-10-24
公開日2006-11-14
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Ligand specificity determined by differentially arranged common ligand-binding residues in the bacterial amino acid chemoreceptors Tsr and Tar.
J.Biol.Chem., 2011
2D4V
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BU of 2d4v by Molmil
Crystal structure of NAD dependent isocitrate dehydrogenase from Acidithiobacillus thiooxidans
分子名称: CITRATE ANION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, isocitrate dehydrogenase
著者Imada, K, Tamura, T, Namba, K, Inagaki, K.
登録日2005-10-24
公開日2006-11-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure and quantum chemical analysis of NAD+-dependent isocitrate dehydrogenase: hydride transfer and co-factor specificity
Proteins, 70, 2008
2D4W
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BU of 2d4w by Molmil
Crystal structure of glycerol kinase from Cellulomonas sp. NT3060
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, glycerol kinase
著者Imada, K, Tamura, T, Namba, K, Inagaki, K.
登録日2005-10-24
公開日2006-11-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of glycerol kinase from Cellulomonas sp. NT3060
To be Published
2D4X
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Crystal structure of a 26K fragment of HAP3 (FlgL)
分子名称: Flagellar hook-associated protein 3
著者Imada, K, Matsunami, H, Samatey, A.F, Nagashima, S, Namba, K.
登録日2005-10-25
公開日2006-11-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of the bacterial flagellar hook-filament junction
To be Published
2D4Y
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Crystal structure of a 49K fragment of HAP1 (FlgK)
分子名称: Flagellar hook-associated protein 1
著者Imada, K, Matsunami, H, Samatey, A.F, Nagashima, S, Namba, K.
登録日2005-10-25
公開日2006-11-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of the bacterial flagellar hook-filament junction
To be Published
2D4Z
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BU of 2d4z by Molmil
Crystal structure of the cytoplasmic domain of the chloride channel ClC-0
分子名称: Chloride channel protein
著者Dutzler, R, Meyer, S.
登録日2005-10-26
公開日2006-02-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Crystal structure of the cytoplasmic domain of the chloride channel ClC-0.
Structure, 14, 2006
2D51
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Pentaketide chromone synthase (M207G mutant)
分子名称: pentaketide chromone synthase
著者Kohno, T, Morita, H.
登録日2005-10-27
公開日2006-11-14
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural Insight into Chain-Length Control and Product Specificity of Pentaketide Chromone Synthase from Aloe arborescens
Chem.Biol., 14, 2007
2D52
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Pentaketide chromone synthase (M207G mutant complexed with Coa)
分子名称: COENZYME A, pentaketide chromone synthase
著者Kohno, T, Morita, H.
登録日2005-10-27
公開日2006-11-14
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural Insight into Chain-Length Control and Product Specificity of Pentaketide Chromone Synthase from Aloe arborescens
Chem.Biol., 14, 2007
2D54
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BU of 2d54 by Molmil
Crystal Structure of Methionyl tRNA Synthetase Y225A Mutant from Thermus Thermophilus
分子名称: Methionyl-tRNA synthetase, ZINC ION
著者Konno, M, Takeda, R, Takasaka, R, Mori, Y, Ishii, R, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-10-28
公開日2006-12-19
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Y225F/Amutation for Met-tRNA synthetase reveals importance of hydrophobic circumstance
To be Published
2D55
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Structural, physical and biological characteristics of RNA.DNA binding agent N8-actinomycin D
分子名称: ACTINOMYCIN D, DNA (5'-D(*GP*AP*AP*GP*CP*TP*TP*C)-3')
著者Shinomiya, M, Chu, W, Carlson, R.G, Weaver, R.F, Takusagawa, F.
登録日1995-05-01
公開日1995-10-15
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal Structure of the 2:1 Complex between D(Gaagcttc) and the Anticancer Drug Actinomycin D.
J.Mol.Biol., 225, 1992
2D56
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Solution Structure of ASABF, Antibacterial Peptide Isolated from a Nematode, Ascaris Suum
分子名称: ASABF
著者Nakano, M, Aizawa, T, Kamiya, M, Miura, K, Kumaki, Y, Demura, M, Tsuda, S, Kawano, K.
登録日2005-10-28
公開日2006-11-14
最終更新日2024-10-30
実験手法SOLUTION NMR
主引用文献Solution structure and function of ASABFd18c, antibacterial peptide isolated from a nematode, asucaris suum
To be Published
2D57
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Double layered 2D crystal structure of AQUAPORIN-4 (AQP4M23) at 3.2 a resolution by electron crystallography
分子名称: Aquaporin-4
著者Hiroaki, Y, Tani, K, Kamegawa, A, Gyobu, N, Nishikawa, K, Suzuki, H, Walz, T, Sasaki, S, Mitsuoka, K, Kimura, K, Mizoguchi, A, Fujiyoshi, Y.
登録日2005-10-29
公開日2006-01-31
最終更新日2023-11-08
実験手法ELECTRON CRYSTALLOGRAPHY (3.2 Å)
主引用文献Implications of the Aquaporin-4 Structure on Array Formation and Cell Adhesion
J.Mol.Biol., 355, 2005
2D58
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Human microglia-specific protein Iba1
分子名称: Allograft inflammatory factor 1, NICKEL (II) ION
著者Kamitori, S.
登録日2005-10-31
公開日2006-10-10
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献X-ray Structures of the Microglia/Macrophage-specific Protein Iba1 from Human and Mouse Demonstrate Novel Molecular Conformation Change Induced by Calcium binding
J.Mol.Biol., 364, 2006
2D59
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hypothetical protein from Pyrococcus horikoshii OT3
分子名称: hypothetical protein PH1109
著者Hiyama, T.B, Sekine, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-10-31
公開日2006-10-31
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural basis of CoA recognition by the Pyrococcus single-domain CoA-binding proteins.
J.STRUCT.FUNCT.GENOM., 7, 2006
2D5A
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BU of 2d5a by Molmil
hypothetical protein from Pyrococcus horikoshii OT3
分子名称: COENZYME A, hypothetical protein PH1109
著者Hiyama, T.B, Sekine, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-10-31
公開日2006-10-31
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis of CoA recognition by the Pyrococcus single-domain CoA-binding proteins.
J.STRUCT.FUNCT.GENOM., 7, 2006
2D5B
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BU of 2d5b by Molmil
Crystal Structure of Thermus Thermophilus Methionyl tRNA synthetase Y225F Mutant obtained in the presence of PEG6000
分子名称: Methionyl-tRNA Synthetase, ZINC ION
著者Konno, M, Takeda, R, Takasaka, R, Mori, Y, Ishii, R, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-10-31
公開日2006-11-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Y225F/A Mutation for Met-tRNA synthetase reveals importance of hydrophobic circumstances
To be Published
2D5C
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Crystal Structure of Shikimate 5-Dehydrogenase (AroE) from Thermus Thermophilus HB8 in complex with shikimate
分子名称: (3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE-1-CARBOXYLIC ACID, SULFATE ION, shikimate 5-dehydrogenase
著者Bagautdinov, B, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-10-31
公開日2006-05-01
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal Structures of Shikimate Dehydrogenase AroE from Thermus thermophilus HB8 and its Cofactor and Substrate Complexes: Insights into the Enzymatic Mechanism
J.Mol.Biol., 373, 2007
2D5D
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Structure of Biotin Carboxyl Carrier Protein (74Val start) from Pyrococcus horikoshi OT3 Ligand Free Form II
分子名称: methylmalonyl-CoA decarboxylase gamma chain
著者Bagautdinov, B, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-11-01
公開日2006-05-01
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Protein biotinylation visualized by a complex structure of biotin protein ligase with a substrate
J.Biol.Chem., 283, 2008

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