PDB: 5653 件ウェブページステータス検索Chemie searchBIRD

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5IS2	Crystal structure of Mycobacterium avium SerB2 at pH 6.6 分子名称: MAGNESIUM ION, Phosphoserine phosphatase 著者 Shree, S, Ramachandran, R. 登録日 2016-03-15 公開日 2016-04-27 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.881 Å) 主引用文献 Crystal Structure of Mycobacterium avium SerB2 (MAV_3907) at pH 6.6 To be published
5I0K	Insights into Substrate Modification by Dehydratases from Type I Polyketide Synthases 分子名称: CROTONYL COENZYME A, Phthiocerol synthesis polyketide synthase type I PpsC 著者 Faille, A, Mourey, L, Pedelacq, J.D. 登録日 2016-02-04 公開日 2017-08-09 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.197 Å) 主引用文献 Insights into Substrate Modification by Dehydratases from Type I Polyketide Synthases. J. Mol. Biol., 429, 2017
7SBB	Structure of type I-D Cascade bound to a ssRNA target 分子名称: Cas10d, Cas11d, Cas5d, ... 著者 Schwartz, E.A, Taylor, D.W. 登録日 2021-09-24 公開日 2022-06-08 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural rearrangements allow nucleic acid discrimination by type I-D Cascade. Nat Commun, 13, 2022
7SBA	Structure of type I-D Cascade bound to a dsDNA target 分子名称: Cas10d, Cas11d, Cas5d, ... 著者 Schwartz, E.A, Taylor, D.W. 登録日 2021-09-24 公開日 2022-06-08 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Structural rearrangements allow nucleic acid discrimination by type I-D Cascade. Nat Commun, 13, 2022
5IAO	Structure and mapping of spontaneous mutational sites of PyrR from Mycobacterium tuberculosis 分子名称: 5-FLUOROURACIL, Bifunctional protein PyrR 著者 Sivaraman, J, Ghode, P, Ramachandran, S. 登録日 2016-02-21 公開日 2016-03-16 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.598 Å) 主引用文献 Structure and mapping of spontaneous mutational sites of PyrR from Mycobacterium tuberculosis Biochem.Biophys.Res.Commun., 471, 2016
8A52	Crystal structure of a chimeric LOV-Histidine kinase SB2F1 (asymmetrical variant, trigonal form with long c-axis) 分子名称: ADENOSINE-5'-TRIPHOSPHATE, FLAVIN MONONUCLEOTIDE, Putative Sensory box protein,Putative Sensory box protein,Sensor protein FixL 著者 Batra-Safferling, R, Arinkin, V, Granzin, J. 登録日 2022-06-14 公開日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.461 Å) 主引用文献 Crystal structure of a chimeric LOV-Histidine kinase SB2F1 (asymmetrical variant, trigonal form with long c axis) To Be Published
8A6X	Crystal structure of a chimeric LOV-Histidine kinase SB2F1 (asymmetrical variant, trigonal form with long c axis) 分子名称: ADENOSINE-5'-TRIPHOSPHATE, FLAVIN MONONUCLEOTIDE, Putative Sensory box protein,Sensor protein FixL 著者 Arinkin, V, Granzin, J, Batra-Safferling, R. 登録日 2022-06-20 公開日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 Crystal structure of a chimeric LOV-Histidine kinase SB2F1 (asymmetrical variant, trigonal form with long c axis) To Be Published
4Q1E	Human dCK C4S-S74E mutant in complex with UDP and the inhibitor 10 {2-{[(1R/S)-1-{2-[3-(2-fluoroethoxy)-4-methoxyphenyl]-5-methyl-1,3-thiazol 4-yl}ethyl]sulfanyl}pyrimidine-4,6-diamine} 分子名称: (R)-2-((1-(2-(3-(2-fluoroethoxy)-4-methoxyphenyl)-5-methylthiazol-4-yl)ethyl)thio)pyrimidine-4,6-diamine, (S)-2-((1-(2-(3-(2-fluoroethoxy)-4-methoxyphenyl)-5-methylthiazol-4-yl)ethyl)thio)pyrimidine-4,6-diamine, Deoxycytidine kinase, ... 著者 Nomme, J, Lavie, A. 登録日 2014-04-03 公開日 2014-11-05 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Structure-guided development of deoxycytidine kinase inhibitors with nanomolar affinity and improved metabolic stability. J.Med.Chem., 57, 2014
4PY7	Crystal Structure of Fab 3.1 分子名称: antibody 3.1 heavy chain, antibody 3.1 light chain 著者 Dreyfus, C. 登録日 2014-03-26 公開日 2014-05-21 最終更新日 2014-06-04 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Alternative Recognition of the Conserved Stem Epitope in Influenza A Virus Hemagglutinin by a VH3-30-Encoded Heterosubtypic Antibody. J.Virol., 88, 2014
5MFI	Designed armadillo repeat protein YIII(Dq.V2)4CqI in complex with peptide (KR)4 分子名称: (KR)4, YIII(Dq.V2)4CqI 著者 Hansen, S, Ernst, P, Reichen, C, Ewald, C, Mittl, P, Plueckthun, A. 登録日 2016-11-18 公開日 2017-09-13 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Curvature of designed armadillo repeat proteins allows modular peptide binding. J. Struct. Biol., 201, 2018
7OBI	Consensus tetratricopeptide repeat protein type RV4 分子名称: CTPR-rv4, PHOSPHATE ION 著者 Eapen, R.S, Perez-Riba, A, Fischer, G, Itzhaki, L.S, Hyvonen, M. 登録日 2021-04-22 公開日 2022-02-23 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Unraveling the Mechanics of a Repeat-Protein Nanospring: From Folding of Individual Repeats to Fluctuations of the Superhelix. Acs Nano, 16, 2022
6C50	Cross-alpha Amyloid-like Structure alphaAmS 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Cross-alpha Amyloid-like Structure alphaAmS, FORMIC ACID 著者 Liu, L, Zhang, S.Q. 登録日 2018-01-13 公開日 2018-08-15 最終更新日 2019-12-18 実験手法 X-RAY DIFFRACTION (2.503 Å) 主引用文献 Designed peptides that assemble into cross-alpha amyloid-like structures. Nat. Chem. Biol., 14, 2018
6ZL1	Crystal structure of human serum albumin in complex with the MCL-1 neutralizing Alphabody CMPX-383B 分子名称: Albumin, CMPX-383B 著者 Pannecoucke, E, Savvides, S.N, Desmet, J, Lasters, I. 登録日 2020-06-30 公開日 2021-04-28 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (3.272 Å) 主引用文献 Cell-penetrating Alphabody protein scaffolds for intracellular drug targeting. Sci Adv, 7, 2021
7OY9	Crystal structure of GMP reductase from mycobacterium smegmatis. 分子名称: Guanosine 5'-monophosphate reductase 著者 Dolezal, M, Klima, M, Pichova, I. 登録日 2021-06-24 公開日 2022-04-27 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 The mycobacterial guaB1 gene encodes a guanosine 5'-monophosphate reductase with a cystathionine-beta-synthase domain. Febs J., 289, 2022
5OD1	Structure of the engineered metalloesterase MID1sc10 complexed with a phosphonate transition state analogue 分子名称: GLYCEROL, MID1sc10, ZINC ION, ... 著者 Mittl, P.R.E, Studer, S, Hansen, D.A, Hilvert, D. 登録日 2017-07-04 公開日 2018-12-12 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.34 Å) 主引用文献 Evolution of a highly active and enantiospecific metalloenzyme from short peptides. Science, 362, 2018
8GA6	Geometrically programmable nanomaterial construction using regularized protein building blocks 分子名称: THR6 著者 Huddy, T, Bera, A.K, Baker, D, Kang, A. 登録日 2023-02-22 公開日 2024-03-13 最終更新日 2024-04-10 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Blueprinting extendable nanomaterials with standardized protein blocks. Nature, 627, 2024
6GYB	Cryo-EM structure of the bacteria-killing type IV secretion system core complex from Xanthomonas citri 分子名称: VirB10 protein, VirB7, VirB9 protein 著者 Sgro, G.G, Costa, T.R.D, Farah, C.S, Waksman, G. 登録日 2018-06-28 公開日 2018-10-24 最終更新日 2019-12-11 実験手法 ELECTRON MICROSCOPY (3.28 Å) 主引用文献 Cryo-EM structure of the bacteria-killing type IV secretion system core complex from Xanthomonas citri. Nat Microbiol, 3, 2018
5E61	Structure of amyloid-forming peptide FGAILSS (residues 23-29) from islet amyloid polypeptide 分子名称: FGAILSS (residues 23-29) from islet amyloid polypeptide 著者 Soriaga, A.B, Eisenberg, D. 登録日 2015-10-09 公開日 2015-12-16 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.79 Å) 主引用文献 Crystal Structures of IAPP Amyloidogenic Segments Reveal a Novel Packing Motif of Out-of-Register Beta Sheets. J.Phys.Chem.B, 120, 2016
5F53	Nano-ring of cadmium ions coordinated by nvPizza2-S16S58 分子名称: CADMIUM ION, CHLORIDE ION, NVPIZZA2-S16S58 著者 Voet, A.R.D, Tame, J.R.H. 登録日 2015-12-04 公開日 2016-12-14 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 A cadmium chloride ring created by a designed symmetrical protein To Be Published
7YPW	Lloviu cuevavirus nucleoprotein-RNA complex 分子名称: Nucleoprotein, RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3') 著者 Hu, S.F, Fujita-Fujiharu, Y, Sugita, Y, Wendt, L, Muramoto, Y, Nakano, M, Hoenen, T, Noda, T. 登録日 2022-08-04 公開日 2023-04-19 最終更新日 2024-07-03 実験手法 ELECTRON MICROSCOPY (3.0356 Å) 主引用文献 Cryoelectron microscopic structure of the nucleoprotein-RNA complex of the European filovirus, Lloviu virus. Pnas Nexus, 2, 2023
7YR8	Lloviu cuevavirus nucleoprotein(1-450 residues)-RNA complex 分子名称: Nucleoprotein, RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3') 著者 Hu, S.F, Fujita-Fujiharu, Y, Sugita, Y, Wendt, L, Muramoto, Y, Nakano, M, Hoenen, T, Noda, T. 登録日 2022-08-09 公開日 2023-04-19 最終更新日 2024-07-03 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Cryoelectron microscopic structure of the nucleoprotein-RNA complex of the European filovirus, Lloviu virus. Pnas Nexus, 2, 2023
8A56	Coenzyme A-persulfide reductase (CoAPR) from Enterococcus faecalis 分子名称: 1,2-ETHANEDIOL, 3'-PHOSPHATE-ADENOSINE-5'-DIPHOSPHATE, Coenzyme A-persulfide reductase, ... 著者 Costa, S.S, Walsh, B.J, Giedroc, D.P, Brito, J.A. 登録日 2022-06-14 公開日 2022-09-14 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Metabolic and Structural Insights into Hydrogen Sulfide Mis-Regulation in Enterococcus faecalis. Antioxidants, 11, 2022
7ZP7	Crystal structure of evolved photoenzyme EnT1.3 (truncated) with bound product 分子名称: (1~{R},10~{R},12~{S})-15-oxa-8-azatetracyclo[8.5.0.0^{1,12}.0^{2,7}]pentadeca-2(7),3,5-trien-9-one, 1,2-ETHANEDIOL, EnT1.3 C 著者 Hardy, F.J, Levy, C. 登録日 2022-04-26 公開日 2022-09-28 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 A designed photoenzyme for enantioselective [2+2] cycloadditions. Nature, 611, 2022
8B1X	Solution NMR structure of the single alpha helix peptide (P3-7)2 分子名称: P3-7_2 著者 Escobedo, A, Coles, M, Diercks, T, Garcia, J, Millet, O, Salvatella, X. 登録日 2022-09-12 公開日 2023-01-25 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 A glutamine-based single alpha-helix scaffold to target globular proteins. Nat Commun, 13, 2022
2V5Q	CRYSTAL STRUCTURE OF WILD-TYPE PLK-1 KINASE DOMAIN IN COMPLEX WITH A SELECTIVE DARPIN 分子名称: DESIGN ANKYRIN REPEAT PROTEIN, SERINE/THREONINE-PROTEIN KINASE PLK1 著者 Bandeiras, T.M, Hillig, R.C, Matias, P.M, Eberspaecher, U, Fanghaenel, J, Thomaz, M, Miranda, S, Crusius, K, Puetter, V, Amstutz, P, Gulotti-Georgieva, M, Binz, H.K, Holz, C, Schmitz, A.A.P, Lang, C, Donner, P, Egner, U, Carrondo, M.A, Mueller-Tiemann, B. 登録日 2007-07-08 公開日 2008-04-01 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure of wild-type Plk-1 kinase domain in complex with a selective DARPin. Acta Crystallogr. D Biol. Crystallogr., 64, 2008

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