PDB: 225946 件ウェブページステータス検索Chemie searchBIRD

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2CZV	Crystal structure of archeal RNase P protein ph1481p in complex with ph1877p 分子名称: ACETIC ACID, Ribonuclease P protein component 2, Ribonuclease P protein component 3, ... 著者 Kawano, S, Kakuta, Y, Nakashima, T, Tanaka, I, Kimura, M. 登録日 2005-07-19 公開日 2006-06-27 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structure of protein Ph1481p in complex with protein Ph1877p of archaeal RNase P from Pyrococcus horikoshii OT3: implication of dimer formation of the holoenzyme J.Mol.Biol., 357, 2006
2CZW	Crystal structure analysis of protein component Ph1496p of P.horikoshii ribonuclease P 分子名称: 50S ribosomal protein L7Ae 著者 Fukuhara, H, Kifusa, M, Watanabe, M, Terada, A, Honda, T, Numata, T, Kakuta, Y, Kimura, M. 登録日 2005-07-19 公開日 2006-04-25 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 A fifth protein subunit Ph1496p elevates the optimum temperature for the ribonuclease P activity from Pyrococcus horikoshii OT3 Biochem.Biophys.Res.Commun., 343, 2006
2CZY	Solution structure of the NRSF/REST-mSin3B PAH1 complex 分子名称: Paired amphipathic helix protein Sin3b, transcription factor REST (version 3) 著者 Nomura, M, Uda-Tochio, H, Murai, K, Mori, N, Nishimura, Y. 登録日 2005-07-20 公開日 2005-12-20 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 The Neural Repressor NRSF/REST Binds the PAH1 Domain of the Sin3 Corepressor by Using its Distinct Short Hydrophobic Helix J.Mol.Biol., 354, 2005
2D00	Subunit F of V-type ATPase/synthase 分子名称: CALCIUM ION, V-type ATP synthase subunit F 著者 Makyio, H, Iino, R, Ikeda, C, Imamura, H, Tamakoshi, M, Iwata, M, Stock, D, Bernal, R.A, Carpenter, E.P, Yoshida, M, Yokoyama, K, Iwata, S. 登録日 2005-07-21 公開日 2005-12-06 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structure of a central stalk subunit F of prokaryotic V-type ATPase/synthase from Thermus thermophilus Embo J., 24, 2005
2D01	Wild Type Photoactive Yellow Protein, P65 Form 分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein 著者 Shimizu, N, Kamikubo, H, Yamazaki, Y, Imamoto, Y, Kataoka, M. 登録日 2005-07-21 公開日 2006-04-04 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.34 Å) 主引用文献 The Crystal Structure of the R52Q Mutant Demonstrates a Role for R52 in Chromophore pK(a) Regulation in Photoactive Yellow Protein Biochemistry, 45, 2006
2D02	R52Q Mutant of Photoactive Yellow Protein, P65 Form 分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein 著者 Shimizu, N, Kamikubo, H, Yamazaki, Y, Imamoto, Y, Kataoka, M. 登録日 2005-07-21 公開日 2006-04-04 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.42 Å) 主引用文献 The Crystal Structure of the R52Q Mutant Demonstrates a Role for R52 in Chromophore pK(a) Regulation in Photoactive Yellow Protein Biochemistry, 45, 2006
2D03	Crystal structure of the G91S mutant of the NNA7 Fab 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... 著者 Xie, K, Song, S.C, Spitalnik, S.L, Wedekind, J.E. 登録日 2005-07-23 公開日 2006-01-24 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.97 Å) 主引用文献 Crystallographic analysis of the NNA7 Fab and proposal for the mode of human blood-group recognition. Acta Crystallogr.,Sect.D, 61, 2005
2D04	Crystal structure of neoculin, a sweet protein with taste-modifying activity. 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Curculin, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Shimizu-Ibuka, A, Morita, Y, Terada, T, Asakura, T, Nakajima, K, Iwata, S, Misaka, T, Sorimachi, H, Arai, S, Abe, K. 登録日 2005-07-25 公開日 2006-06-20 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.76 Å) 主引用文献 Crystal structure of neoculin: insights into its sweetness and taste-modifying activity J.Mol.Biol., 359, 2006
2D05	Chitosanase From Bacillus circulans mutant K218P 分子名称: Chitosanase, SULFATE ION 著者 Fukamizo, T, Amano, S, Yamaguchi, K, Yoshikawa, T, Katsumi, T, Saito, J, Suzuki, M, Miki, K, Nagata, Y, Ando, A. 登録日 2005-07-25 公開日 2005-12-06 最終更新日 2021-11-10 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Bacillus circulans MH-K1 Chitosanase: Amino Acid Residues Responsible for Substrate Binding J.Biochem.(Tokyo), 138, 2005
2D06	Human Sult1A1 Complexed With Pap and estradiol 分子名称: ADENOSINE-3'-5'-DIPHOSPHATE, ESTRADIOL, Sulfotransferase 1A1 著者 Gamage, N.U, Tsvetanov, S, Duggleby, R.G, McManus, M.E, Martin, J.L. 登録日 2005-07-25 公開日 2005-10-25 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 The structure of human SULT1A1 crystallized with estradiol. An insight into active site plasticity and substrate inhibition with multi-ring substrates J.Biol.Chem., 280, 2005
2D07	Crystal Structure of SUMO-3-modified Thymine-DNA Glycosylase 分子名称: G/T mismatch-specific thymine DNA glycosylase, Ubiquitin-like protein SMT3B 著者 Baba, D, Maita, N, Jee, J.G, Uchimura, Y, Saitoh, H, Sugasawa, K, Hanaoka, F, Tochio, H, Hiroaki, H, Shirakawa, M. 登録日 2005-07-26 公開日 2006-06-06 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal Structure of SUMO-3-modified Thymine-DNA Glycosylase J.Mol.Biol., 359, 2006
2D09	A Role for Active Site Water Molecules and Hydroxyl Groups of Substrate for Oxygen Activation in Cytochrome P450 158A2 分子名称: FLAVIOLIN, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE, ... 著者 Zhao, B, Waterman, M.R. 登録日 2005-07-30 公開日 2005-10-25 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Role of active site water molecules and substrate hydroxyl groups in oxygen activation by cytochrome P450 158A2: a new mechanism of proton transfer J.Biol.Chem., 280, 2005
2D0A	Crystal structure of Bst-RNase HIII 分子名称: ribonuclease HIII 著者 Chon, H, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. 登録日 2005-07-31 公開日 2006-07-18 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure and structure-based mutational analyses of RNase HIII from Bacillus stearothermophilus: a new type 2 RNase H with TBP-like substrate-binding domain at the N terminus J.Mol.Biol., 356, 2006
2D0B	Crystal structure of Bst-RNase HIII in complex with Mg2+ 分子名称: MAGNESIUM ION, ribonuclease HIII 著者 Chon, H, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. 登録日 2005-07-31 公開日 2006-07-18 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal structure and structure-based mutational analyses of RNase HIII from Bacillus stearothermophilus: a new type 2 RNase H with TBP-like substrate-binding domain at the N terminus J.Mol.Biol., 356, 2006
2D0C	Crystal structure of Bst-RNase HIII in complex with Mn2+ 分子名称: MANGANESE (II) ION, ribonuclease HIII 著者 Chon, H, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. 登録日 2005-07-31 公開日 2006-07-18 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Crystal structure and structure-based mutational analyses of RNase HIII from Bacillus stearothermophilus: a new type 2 RNase H with TBP-like substrate-binding domain at the N terminus J.Mol.Biol., 356, 2006
2D0D	Crystal Structure of a Meta-cleavage Product Hydrolase (CumD) A129V Mutant 分子名称: 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase, CHLORIDE ION, PHOSPHATE ION 著者 Jun, S.Y, Fushinobu, S, Nojiri, H, Omori, T, Shoun, H, Wakagi, T. 登録日 2005-08-01 公開日 2006-06-06 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Improving the catalytic efficiency of a meta-cleavage product hydrolase (CumD) from Pseudomonas fluorescens IP01 Biochim.Biophys.Acta, 1764, 2006
2D0E	Substrate assited in Oxygen Activation in Cytochrome P450 158A2 分子名称: 2-HYDROXYNAPHTHOQUINONE, PROTOPORPHYRIN IX CONTAINING FE, putative cytochrome P450 著者 Zhao, B, Waterman, M.R. 登録日 2005-08-02 公開日 2005-10-25 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Role of active site water molecules and substrate hydroxyl groups in oxygen activation by cytochrome P450 158A2: a new mechanism of proton transfer J.Biol.Chem., 280, 2005
2D0F	Crystal Structure of Thermoactinomyces vulgaris R-47 Alpha-Amylase 1 (TVAI) Mutant D356N complexed with P2, a pullulan model oligosaccharide 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-6)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose, ... 著者 Abe, A, Yoshida, H, Tonozuka, T, Sakano, Y, Kamitori, S. 登録日 2005-08-02 公開日 2006-07-11 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.08 Å) 主引用文献 Complexes of Thermoactinomyces vulgaris R-47 alpha-amylase 1 and pullulan model oligossacharides provide new insight into the mechanism for recognizing substrates with alpha-(1,6) glycosidic linkages Febs J., 272, 2005
2D0G	Crystal Structure of Thermoactinomyces vulgaris R-47 Alpha-Amylase 1 (TVAI) Mutant D356N/E396Q complexed with P5, a pullulan model oligosaccharide 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, alpha-D-glucopyranose, ... 著者 Abe, A, Yoshida, H, Tonozuka, T, Sakano, Y, Kamitori, S. 登録日 2005-08-02 公開日 2006-07-11 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Complexes of Thermoactinomyces vulgaris R-47 alpha-amylase 1 and pullulan model oligossacharides provide new insight into the mechanism for recognizing substrates with alpha-(1,6) glycosidic linkages Febs J., 272, 2005
2D0H	Crystal Structure of Thermoactinomyces vulgaris R-47 Alpha-Amylase 1 (TVAI) Mutant D356N/E396Q complexed with P2, a pullulan model oligosaccharide 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, alpha-D-glucopyranose-(1-6)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-6)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ... 著者 Abe, A, Yoshida, H, Tonozuka, T, Sakano, Y, Kamitori, S. 登録日 2005-08-02 公開日 2006-07-11 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Complexes of Thermoactinomyces vulgaris R-47 alpha-amylase 1 and pullulan model oligossacharides provide new insight into the mechanism for recognizing substrates with alpha-(1,6) glycosidic linkages Febs J., 272, 2005
2D0I	Crystal Structure PH0520 protein from Pyrococcus horikoshii OT3 分子名称: dehydrogenase 著者 Lokanath, N.K, Terao, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2005-08-02 公開日 2006-02-02 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Crystal Structure PH0520 protein from Pyrococcus horikoshii OT3 To be Published
2D0J	Crystal Structure of Human GlcAT-S Apo Form 分子名称: Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 2 著者 Shiba, T, Kakuda, S, Ishiguro, M, Oka, S, Kawasaki, T, Wakatsuki, S, Kato, R. 登録日 2005-08-03 公開日 2006-07-18 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structure of GlcAT-S, a human glucuronyltransferase, involved in the biosynthesis of the HNK-1 carbohydrate epitope To be published
2D0K	Methionine-free mutant of Escherichia coli dihydrofolate reductase 分子名称: CHLORIDE ION, Dihydrofolate reductase, FOLIC ACID 著者 Katayanagi, K. 登録日 2005-08-04 公開日 2006-02-28 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Evolutional Design of a Hyperactive Cysteine- and Methionine-free Mutant of Escherichia coli Dihydrofolate Reductase J.Biol.Chem., 281, 2006
2D0N	Crystal structure of the C-terminal SH3 domain of the adaptor protein GADS in complex with SLP-76 motif peptide reveals a unique SH3-SH3 interaction 分子名称: GRB2-related adaptor protein 2, SLP-76 binding peptide 著者 Dimasi, N. 登録日 2005-08-04 公開日 2005-08-23 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.57 Å) 主引用文献 Crystal structure of the C-terminal SH3 domain of the adaptor protein GADS in complex with SLP-76 motif peptide reveals a unique SH3-SH3 interaction Int.J.Biochem.Cell Biol., 39, 2007
2D0O	Structure of diol dehydratase-reactivating factor complexed with ADP and Mg2+ 分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, SULFATE ION, ... 著者 Shibata, N, Mori, K, Hieda, N, Higuchi, Y, Yamanishi, M, Toraya, T. 登録日 2005-08-05 公開日 2006-02-28 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Release of a damaged cofactor from a coenzyme B12-dependent enzyme: X-ray structures of diol dehydratase-reactivating factor Structure, 13, 2005

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