Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7QU6
DownloadVisualize
BU of 7qu6 by Molmil
Crystal structure of the N-terminal domain of Siglec-8
分子名称: Sialic acid-binding Ig-like lectin 8
著者Lenza, M.P, Atxabal, U, Nycholat, C.M, Oyenarte, I, Paulson, J.C, Franconetti, A, Quintana, J.I, Unione, L, Delgado, S, Jimenez-Barbero, J, Ereno-Orbea, J.
登録日2022-01-17
公開日2023-01-18
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Structures of the Inhibitory Receptor Siglec-8 in Complex with a High-Affinity Sialoside Analogue and a Therapeutic Antibody.
Jacs Au, 3, 2023
7QUH
DownloadVisualize
BU of 7quh by Molmil
Siglec-8 in complex with therapeutic Fab AK002.
分子名称: Sialic acid-binding Ig-like lectin 8, Sialic acid-binding immunoglobulin-type lectin
著者Lenza, M.P, Oyenarte, I, Jimenez Barbero, J, Ereno Orbea, J.
登録日2022-01-18
公開日2023-05-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.867 Å)
主引用文献Structures of the Inhibitory Receptor Siglec-8 in Complex with a High-Affinity Sialoside Analogue and a Therapeutic Antibody.
Jacs Au, 3, 2023
5F7E
DownloadVisualize
BU of 5f7e by Molmil
Crystal structure of germ-line precursor of 3BNC60 Fab
分子名称: Fab heavy chain, Fab light chain
著者Sievers, S.A, Scharf, L, Jiang, S, Bjorkman, P.J.
登録日2015-12-08
公開日2016-04-06
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for germline antibody recognition of HIV-1 immunogens.
Elife, 5, 2016
5FA2
DownloadVisualize
BU of 5fa2 by Molmil
Crystal structure of 426c.TM4deltaV1-3 p120
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CITRATE ANION, THIOCYANATE ION, ...
著者Scharf, L, Bjorkman, P.J.
登録日2015-12-10
公開日2016-04-06
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for germline antibody recognition of HIV-1 immunogens.
Elife, 5, 2016
5FEC
DownloadVisualize
BU of 5fec by Molmil
Crystal structure of 3BNC60 Fab germline precursor in complex with 426c.TM4deltaV1-3 gp120
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 426c.TM4deltaV1-3 gp120, ...
著者Scharf, L, Bjorkman, P.J.
登録日2015-12-16
公開日2016-05-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.17 Å)
主引用文献Structural basis for germline antibody recognition of HIV-1 immunogens.
Elife, 5, 2016
1N0X
DownloadVisualize
BU of 1n0x by Molmil
Crystal Structure of a Broadly Neutralizing Anti-HIV-1 Antibody in Complex with a Peptide Mimotope
分子名称: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, B2.1 peptide, GLYCEROL, ...
著者Saphire, E.O, Montero, M, Menendez, A, Irving, M.B, Zwick, M.B, Parren, P.W.H.I, Burton, D.R, Scott, J.K, Wilson, I.A.
登録日2002-10-15
公開日2004-04-13
最終更新日2017-06-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of a Broadly Neutralizing Anti-HIV-1 Antibody in Complex with a Peptide Mimotope
To be Published
3SO3
DownloadVisualize
BU of 3so3 by Molmil
Structures of Fab-Protease Complexes Reveal a Highly Specific Non-Canonical Mechanism of Inhibition.
分子名称: A11 FAB heavy chain, A11 FAB light chain, GLYCEROL, ...
著者Schneider, E.L, Farady, C.J, Egea, P.F, Goetz, D.H, Baharuddin, A, Craik, C.S.
登録日2011-06-29
公開日2012-06-20
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A reverse binding motif that contributes to specific protease inhibition by antibodies.
J.Mol.Biol., 415, 2012
4JG1
DownloadVisualize
BU of 4jg1 by Molmil
Structure of phosphoserine/threonine (pSTAb) scaffold bound to pThr peptide
分子名称: Fab heavy chain, Fab light chain, PROPANOIC ACID, ...
著者Koerber, J.T, Thomsen, N.D, Hannigan, B.T, Degrado, W.F, Wells, J.A.
登録日2013-02-28
公開日2013-08-28
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Nature-inspired design of motif-specific antibody scaffolds.
Nat.Biotechnol., 31, 2013
6JB5
DownloadVisualize
BU of 6jb5 by Molmil
Crystal structure of nanobody D3-L11 mutant Y102A in complex with hen egg-white lysozyme (form II)
分子名称: CHLORIDE ION, GLYCEROL, Lysozyme C, ...
著者Caaveiro, J.M.M, Tamura, H, Akiba, H, Tsumoto, K.
登録日2019-01-25
公開日2019-11-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural and thermodynamic basis for the recognition of the substrate-binding cleft on hen egg lysozyme by a single-domain antibody.
Sci Rep, 9, 2019
4JFY
DownloadVisualize
BU of 4jfy by Molmil
Apo structure of phosphotyrosine (pYAb) scaffold
分子名称: Fab heavy chain, Fab light chain, TETRAETHYLENE GLYCOL
著者Koerber, J.T, Thomsen, N.D, Hannigan, B.T, Degrado, W.F, Wells, J.A.
登録日2013-02-28
公開日2013-08-28
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.63 Å)
主引用文献Nature-inspired design of motif-specific antibody scaffolds.
Nat.Biotechnol., 31, 2013
7DPM
DownloadVisualize
BU of 7dpm by Molmil
Crystal structure of SARS-CoV-2 Spike RBD in complex with MW06 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, ...
著者Wang, J, Jiao, S, Wang, R, Zhang, J, Zhang, M, Wang, M.
登録日2020-12-20
公開日2021-02-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.304 Å)
主引用文献Characterization of MW06, a human monoclonal antibody with cross-neutralization activity against both SARS-CoV-2 and SARS-CoV.
Mabs, 13, 2021
4JFZ
DownloadVisualize
BU of 4jfz by Molmil
Structure of phosphoserine (pSAb) scaffold bound to pSer peptide
分子名称: Fab heavy chain, Fab light chain, PROPANOIC ACID, ...
著者Koerber, J.T, Thomsen, N.D, Hannigan, B.T, Degrado, W.F, Wells, J.A.
登録日2013-02-28
公開日2013-08-28
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Nature-inspired design of motif-specific antibody scaffolds.
Nat.Biotechnol., 31, 2013
8V4F
DownloadVisualize
BU of 8v4f by Molmil
Model and map from local refinement of a CAB-A17 - Omicron Ba.1 spike complex
分子名称: CAB-A17 variable heavy-chain, CAB-A17 variable light chain, Spike protein S1
著者Hallberg, B.M, Das, H.
登録日2023-11-29
公開日2024-06-05
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (2.68 Å)
主引用文献Structural basis of broad SARS-CoV-2 cross-neutralization by affinity-matured public antibodies.
Cell Rep Med, 5, 2024
8XSF
DownloadVisualize
BU of 8xsf by Molmil
SARS-CoV-2 RBD + IMCAS-364 + hACE2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, IMCAS-364 H chain, ...
著者Tong, Z, Cui, Y, Xie, Y, Tong, J, Gao, G.F, Qi, J.
登録日2024-01-09
公開日2024-07-17
実験手法ELECTRON MICROSCOPY (2.16 Å)
主引用文献Deciphering a reliable synergistic bispecific strategy of rescuing antibodies for SARS-CoV-2 escape variants, including BA.2.86, EG.5.1, and JN.1.
Cell Rep, 43, 2024
8XSI
DownloadVisualize
BU of 8xsi by Molmil
SARS-CoV-2 RBD + IMCAS-364 (Local Refinement)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, IMCAS-364 H chain, IMCAS-364 L chain, ...
著者Tong, Z, Cui, Y, Xie, Y, Tong, J, Gao, G.F, Qi, J.
登録日2024-01-09
公開日2024-07-17
実験手法ELECTRON MICROSCOPY (2.1 Å)
主引用文献Deciphering a reliable synergistic bispecific strategy of rescuing antibodies for SARS-CoV-2 escape variants, including BA.2.86, EG.5.1, and JN.1.
Cell Rep, 43, 2024
8XSE
DownloadVisualize
BU of 8xse by Molmil
SARS-CoV-2 RBD + IMCAS-123 + IMCAS-72 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, IMCAS-123 H chain, IMCAS-123 L chain, ...
著者Tong, Z, Cui, Y, Xie, Y, Tong, J, Gao, G.F, Qi, J.
登録日2024-01-09
公開日2024-07-17
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Deciphering a reliable synergistic bispecific strategy of rescuing antibodies for SARS-CoV-2 escape variants, including BA.2.86, EG.5.1, and JN.1.
Cell Rep, 43, 2024
8XSJ
DownloadVisualize
BU of 8xsj by Molmil
SARS-CoV-2 Omicron BA.4 RBD + IMCAS-316 + ACE2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
著者Tong, Z, Cui, Y, Xie, Y, Tong, J, Gao, G.F, Qi, J.
登録日2024-01-09
公開日2024-07-17
実験手法ELECTRON MICROSCOPY (2.61 Å)
主引用文献Deciphering a reliable synergistic bispecific strategy of rescuing antibodies for SARS-CoV-2 escape variants, including BA.2.86, EG.5.1, and JN.1.
Cell Rep, 43, 2024
8XSL
DownloadVisualize
BU of 8xsl by Molmil
SARS-CoV-2 spike + IMCAS-123
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, IMCAS-123 heavy chain, ...
著者Tong, Z, Cui, Y, Xie, Y, Tong, J, Gao, G.F, Qi, J.
登録日2024-01-09
公開日2024-07-17
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Deciphering a reliable synergistic bispecific strategy of rescuing antibodies for SARS-CoV-2 escape variants, including BA.2.86, EG.5.1, and JN.1.
Cell Rep, 43, 2024
7CWO
DownloadVisualize
BU of 7cwo by Molmil
SARS-CoV-2 spike protein RBD and P17 fab complex
分子名称: Spike glycoprotein, heavy chain of P17 Fab, light chain of P17 Fab
著者Wang, X, Wang, N.
登録日2020-08-29
公開日2020-12-16
最終更新日2021-01-13
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Rational development of a human antibody cocktail that deploys multiple functions to confer Pan-SARS-CoVs protection.
Cell Res., 31, 2021
4RGN
DownloadVisualize
BU of 4rgn by Molmil
Structure of Staphylococcal Enterotoxin B bound to two neutralizing antibodies, 14G8 and 6D3
分子名称: 14G8 heavy chain, 14G8 light chain, 6D3 heavy chain, ...
著者Franklin, M.C, Dutta, K, Varshney, A.K, Goger, M.J, Fries, B.C.
登録日2014-09-30
公開日2015-01-21
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.698 Å)
主引用文献Mechanisms mediating enhanced neutralization efficacy of staphylococcal enterotoxin B by combinations of monoclonal antibodies.
J.Biol.Chem., 290, 2015
7X2G
DownloadVisualize
BU of 7x2g by Molmil
Cryo-EM structure of Coxsackievirus B1 empty particle in complex with nAb nAb 2E6 (CVB1-E:2E6)
分子名称: 2E6 heavy chain, 2E6 light chain, VP2, ...
著者Zheng, Q, Zhu, R, Sun, H, Cheng, T, Li, S, Xia, N.
登録日2022-02-25
公開日2022-09-28
最終更新日2022-10-05
実験手法ELECTRON MICROSCOPY (3.58 Å)
主引用文献Structural basis for the synergistic neutralization of coxsackievirus B1 by a triple-antibody cocktail.
Cell Host Microbe, 30, 2022
7X2I
DownloadVisualize
BU of 7x2i by Molmil
Cryo-EM structure of Coxsackievirus B1 pre-A particle in complex with nAb 2E6 (CVB1-pre-A:2E6)
分子名称: 2E6 heavy chain, 2E6 light chain, Capsid protein VP4, ...
著者Zheng, Q, Zhu, R, Sun, H, Cheng, T, Li, S, Xia, N.
登録日2022-02-25
公開日2022-09-28
最終更新日2022-10-05
実験手法ELECTRON MICROSCOPY (3.29 Å)
主引用文献Structural basis for the synergistic neutralization of coxsackievirus B1 by a triple-antibody cocktail.
Cell Host Microbe, 30, 2022
7X2O
DownloadVisualize
BU of 7x2o by Molmil
Cryo-EM structure of Coxsackievirus B1 mature virion in complex with nAb 2E6 (CVB1-M:2E6)
分子名称: 2E6 heavy chain, 2E6 light chain, Capsid protein VP4, ...
著者Zheng, Q, Zhu, R, Sun, H, Cheng, T, Li, S, Xia, N.
登録日2022-02-25
公開日2022-09-28
最終更新日2022-10-05
実験手法ELECTRON MICROSCOPY (3.15 Å)
主引用文献Structural basis for the synergistic neutralization of coxsackievirus B1 by a triple-antibody cocktail.
Cell Host Microbe, 30, 2022
7X2T
DownloadVisualize
BU of 7x2t by Molmil
Cryo-EM structure of Coxsackievirus B1 mature virion in complex with nAb 8A10 (CVB1-M:8A10)
分子名称: 8A10 heavy chain, 8A10 light chain, Capsid protein VP4, ...
著者Zheng, Q, Zhu, R, Sun, H, Cheng, T, Li, S, Xia, N.
登録日2022-02-26
公開日2022-09-28
最終更新日2022-10-05
実験手法ELECTRON MICROSCOPY (3.69 Å)
主引用文献Structural basis for the synergistic neutralization of coxsackievirus B1 by a triple-antibody cocktail.
Cell Host Microbe, 30, 2022
7X3E
DownloadVisualize
BU of 7x3e by Molmil
Cryo-EM structure of Coxsackievirus B1 pre-A-particle in complex with nAb 9A3 (CVB1-pre-A:9A3)
分子名称: 9A3 heavy chain, 9A3 light chain, Capsid protein VP4, ...
著者Zheng, Q, Zhu, R, Sun, H, Cheng, T, Li, S, Xia, N.
登録日2022-02-28
公開日2022-09-28
実験手法ELECTRON MICROSCOPY (3.44 Å)
主引用文献Structural basis for the synergistic neutralization of coxsackievirus B1 by a triple-antibody cocktail.
Cell Host Microbe, 30, 2022

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon