PDB: 22592 件ウェブページステータス検索Chemie searchBIRD

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7N11	Crystal structure of the M. abscessus LeuRS editing domain in complex with epetraborole-AMP adduct 分子名称: Leucine--tRNA ligase, SULFATE ION 著者 Kalthoff, E, Schmeing, M. 登録日 2021-05-26 公開日 2021-10-06 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Efficacy of epetraborole against Mycobacterium abscessus is increased with norvaline. Plos Pathog., 17, 2021
4AQY	Structure of ribosome-apramycin complexes 分子名称: 16S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ... 著者 Matt, T, Ng, C.L, Lang, K, Sha, S.H, Akbergenov, R, Shcherbakov, D, Meyer, M, Duscha, S, Xie, J, Dubbaka, S.R, Perez-Fernandez, D, Vasella, A, Ramakrishnan, V, Schacht, J, Bottger, E.C. 登録日 2012-04-20 公開日 2012-07-18 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Dissociation of Antibacterial Activity and Aminoglycoside Ototoxicity in the 4-Monosubstituted 2-Deoxystreptamine Apramycin. Proc.Natl.Acad.Sci.USA, 109, 2012
5ZRN	Inhibitor bound crystal structure of N-terminal domain of FACL13 from Mycobacterium tuberculosis 分子名称: 5'-O-{[(1R)-1-hydroxydodecyl]sulfamoyl}adenosine, Long-chain-fatty-acid--CoA ligase FadD13 著者 Goyal, A, Sankaranarayanan, R. 登録日 2018-04-24 公開日 2019-04-24 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.37 Å) 主引用文献 Inhibitor bound crystal structure of N-terminal domain of FACL13 from Mycobacterium tuberculosis To Be Published
7UUR	The 1.67 Angstrom CryoEM structure of the [NiFe]-hydrogenase Huc from Mycobacterium smegmatis - catalytic dimer (Huc2S2L) 分子名称: CARBONMONOXIDE-(DICYANO) IRON, FE3-S4 CLUSTER, HYDROXIDE ION, ... 著者 Grinter, R, Venugopal, H, Kropp, A, Greening, C. 登録日 2022-04-28 公開日 2023-01-04 最終更新日 2023-03-29 実験手法 ELECTRON MICROSCOPY (1.67 Å) 主引用文献 Structural basis for bacterial energy extraction from atmospheric hydrogen. Nature, 615, 2023
6C30	Mycobacterium smegmatis RimJ (apo form) 分子名称: CHLORIDE ION, GLYCEROL, GNAT family acetyltransferase 著者 Favrot, L, Hegde, S.S, Blanchard, J.S. 登録日 2018-01-09 公開日 2019-01-16 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.397 Å) 主引用文献 Structural Characterization of Mycobacterium smegmatis RimJ, an N-acetyltransferase protein To Be Published
5Z51	Helicase binding domain of primase from Mycobacterium tuberculosis 分子名称: ACETATE ION, DI(HYDROXYETHYL)ETHER, DNA primase 著者 Sharma, D.P, Gourinath, S. 登録日 2018-01-16 公開日 2018-11-28 実験手法 X-RAY DIFFRACTION (1.583 Å) 主引用文献 Structural insights into the interaction of helicase and primase inMycobacterium tuberculosis. Biochem. J., 475, 2018
7KMW	Crystal structure of IspD from Mycobacterium paratuberculosis 分子名称: 1,2-ETHANEDIOL, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2020-11-03 公開日 2020-11-11 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Crystal structure of IspD from Mycobacterium paratuberculosis To Be Published
7UQK	Cryo-EM structure of the S. cerevisiae chromatin remodeler Yta7 hexamer bound to ADP 分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase histone chaperone YTA7 著者 Wang, F, Feng, X, Li, H. 登録日 2022-04-19 公開日 2023-02-01 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 The Saccharomyces cerevisiae Yta7 ATPase hexamer contains a unique bromodomain tier that functions in nucleosome disassembly. J.Biol.Chem., 299, 2022
7UQI	Cryo-EM structure of the S. cerevisiae chromatin remodeler Yta7 hexamer bound to ADP 分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase histone chaperone YTA7 著者 Wang, F, Feng, X, Li, H. 登録日 2022-04-19 公開日 2023-02-01 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 The Saccharomyces cerevisiae Yta7 ATPase hexamer contains a unique bromodomain tier that functions in nucleosome disassembly. J.Biol.Chem., 299, 2022
8W22	Umb1 umbrella toxin particle (local refinement of UmbB1 bound ALF of UmbC1 and UmbA1) 分子名称: Intein C-terminal splicing domain-containing protein, Secreted esterase, Secreted protein 著者 Park, Y.J, Zhao, Q, Seattle Structural Genomics Center for Infectious Disease (SSGCID), DiMaio, F, Mougous, J.D, Veesler, D. 登録日 2024-02-19 公開日 2024-04-17 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Streptomyces umbrella toxin particles block hyphal growth of competing species. Nature, 629, 2024
8FC5	Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and azithromycin at 2.65A resolution 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 16S Ribosomal RNA, 23S Ribosomal RNA, ... 著者 Chen, C.-W, Syroegin, E.A, Svetlov, M.S, Polikanov, Y.S. 登録日 2022-12-01 公開日 2023-07-26 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Structural insights into the mechanism of overcoming Erm-mediated resistance by macrolides acting together with hygromycin-A. Nat Commun, 14, 2023
8FC4	Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and erythromycin at 2.45A resolution 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 16S Ribosomal RNA, 23S Ribosomal RNA, ... 著者 Chen, C.-W, Syroegin, E.A, Svetlov, M.S, Polikanov, Y.S. 登録日 2022-12-01 公開日 2023-07-26 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 Structural insights into the mechanism of overcoming Erm-mediated resistance by macrolides acting together with hygromycin-A. Nat Commun, 14, 2023
8W20	Umb1 umbrella toxin particle 分子名称: Intein C-terminal splicing domain-containing protein, Secreted esterase, Secreted protein 著者 Park, Y.J, Zhao, Q, Seattle Structural Genomics Center for Infectious Disease (SSGCID), DiMaio, F, Mougous, J.D, Veesler, D. 登録日 2024-02-19 公開日 2024-04-17 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Streptomyces umbrella toxin particles block hyphal growth of competing species. Nature, 629, 2024
7UGW	M. tuberculosis DNA gyrase cleavage core bound to DNA and evybactin 分子名称: DNA (46-MER), DNA gyrase subunit A, DNA gyrase subunit B, ... 著者 Hauk, G, Imai, Y, Lewis, K, Berger, J.M. 登録日 2022-03-25 公開日 2022-08-17 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Evybactin is a DNA gyrase inhibitor that selectively kills Mycobacterium tuberculosis. Nat.Chem.Biol., 18, 2022
6C0Y	Lysinoalanine synthase, DurN, from duramycin biosynthesis bound to duramycin 分子名称: CYS-LYS-GLN-DAL-CYS-ALA-PHE-GLY-PRO-PHE-DBB-PHE-VAL-CYS-BH2-GLY-ASN-DBB-LYS, Lysinoalanine synthase, POTASSIUM ION 著者 Cogan, D.P, Nair, S.K. 登録日 2018-01-03 公開日 2018-09-05 最終更新日 2024-07-10 実験手法 X-RAY DIFFRACTION (1.66 Å) 主引用文献 Substrate-assisted enzymatic formation of lysinoalanine in duramycin. Nat. Chem. Biol., 14, 2018
7WH4	Crystal structure of the PadR-family transcriptional regulator Rv3488 of Mycobacterium tuberculosis H37Rv in complex with Manganese ion 分子名称: MANGANESE (II) ION, Transcriptional regulator Rv3488 著者 Arora, A, Zohib, M, Biswal, B.K, Pal, R.K. 登録日 2021-12-29 公開日 2022-02-09 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal structure of PadR-family transcriptional regulator Rv3488 of Mycobacterium tuberculosis H37Rv in complex with Manganese ion To Be Published
6C0H	Lysinoalanine synthase, DurN, from duramycin biosynthesis bound to 1-Dha6Ala 分子名称: GLN-DAL-CYS-ALA-PHE-GLY-PRO-PHE-DBB-PHE-VAL-CYS-BH2-GLY, Lysinoalanine synthase, POTASSIUM ION 著者 Cogan, D.P, Nair, S.K. 登録日 2017-12-31 公開日 2018-09-05 最終更新日 2024-07-10 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Substrate-assisted enzymatic formation of lysinoalanine in duramycin. Nat. Chem. Biol., 14, 2018
6C0G	Lysinoalanine synthase, DurN, from duramycin biosynthesis 分子名称: Lysinoalanine synthase, POTASSIUM ION 著者 Cogan, D.P, Nair, S.K. 登録日 2017-12-31 公開日 2018-09-05 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.145 Å) 主引用文献 Substrate-assisted enzymatic formation of lysinoalanine in duramycin. Nat. Chem. Biol., 14, 2018
7VEP	Crystal structure and biophysical characterization of TPR domain of EccA5 from ESX-5 pathway of Mycobacterium tuberculosis H37RVR 分子名称: ESX-5 secretion system protein EccA5, GLYCEROL, SULFATE ION 著者 Ramachandran, R, Sharma, V.K, Vishwakarma, J. 登録日 2021-09-09 公開日 2022-09-14 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Crystal structure and biophysical characterization of TPR domain of EccA5 from ESX-5 pathway of Mycobacterium tuberculosis H37RVR To Be Published
6O9F	The structure of Thermomyces Lanuginosa lipase in complex with 1,3 diacylglycerol in a monoclinic crystal form 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-hydroxy-3-(octadecanoyloxy)propyl pentacosanoate, CALCIUM ION, ... 著者 McPherson, A. 登録日 2019-03-13 公開日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.48 Å) 主引用文献 The Crystal Structures of Thermomyces (Humicola) Lanuginosa Lipase in Complex with Enzymatic Reactants Curr Enzym Inhib, 16, 2020
6O8V	The structure of lipase from Thermomyces Lanuginosa in complex with 1,3 diacylglycerol: Rhombohedral crystal form 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-hydroxy-3-(octadecanoyloxy)propyl pentacosanoate, Lipase, ... 著者 McPherson, A. 登録日 2019-03-12 公開日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 The Crystal Structures of Thermomyces (Humicola) Lanuginosa Lipase in Complex with Enzymatic Reactants Curr Enzym Inhib, 16, 2020
7VPD	Cryo-EM structure of Streptomyces coelicolor RNAP-promoter open complex with one Zur dimers 分子名称: DNA (84-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... 著者 Yang, X, Zheng, J. 登録日 2021-10-15 公開日 2022-08-03 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.77 Å) 主引用文献 Structural basis of Streptomyces transcription activation by zinc uptake regulator. Nucleic Acids Res., 50, 2022
7VPZ	Cryo-EM structure of Streptomyces coelicolor transcription initial complex with one Zur dimer 分子名称: DNA (84-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... 著者 Yang, X, Zheng, J. 登録日 2021-10-18 公開日 2022-08-03 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (4.14 Å) 主引用文献 Structural basis of Streptomyces transcription activation by zinc uptake regulator. Nucleic Acids Res., 50, 2022
6OSZ	High Resolution Structure of the Monoclinic Form of Thermomyces Lanuginosa Lipase Complexed with Its Catalytic Products 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-hydroxy-3-(octadecanoyloxy)propyl pentacosanoate, CALCIUM ION, ... 著者 McPherson, A. 登録日 2019-05-02 公開日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.43 Å) 主引用文献 The Crystal Structures of Thermomyces (Humicola) Lanuginosa Lipase in Complex with Enzymatic Reactants Curr Enzym Inhib, 16, 2020
7A0S	50S Deinococcus radiodurans ribosome bounded with mycinamicin I 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 50S ribosomal protein L13, 50S ribosomal protein L14, ... 著者 Breiner, E, Eyal, Z, Matzov, D, Halfon, Y, Cimicata, G, Rozenberg, H, Zimmerman, E, Bashan, A, Yonath, A. 登録日 2020-08-10 公開日 2021-08-18 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (3.22 Å) 主引用文献 Ribosome-binding and anti-microbial studies of the mycinamicins, 16-membered macrolide antibiotics from Micromonospora griseorubida. Nucleic Acids Res., 49, 2021

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