PDB: 223532 件ウェブページステータス検索Chemie searchBIRD

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6THE	Crystal structure of core domain of four-domain heme-cupredoxin-Cu nitrite reductase from Bradyrhizobium sp. ORS 375 分子名称: CHLORIDE ION, COPPER (II) ION, Copper-containing nitrite reductase, ... 著者 Sasaki, D, Watanabe, T.F, Eady, R.R, Garratt, R.C, Antonyuk, S.V, Hasnain, S.S. 登録日 2019-11-20 公開日 2020-04-22 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.87 Å) 主引用文献 Reverse protein engineering of a novel 4-domain copper nitrite reductase reveals functional regulation by protein-protein interaction. Febs J., 288, 2021
6S0W	The crystal structure of kanamycin B dioxygenase (KanJ) from Streptomyces kanamyceticus in complex with nickel and kanamycin B sulfate 分子名称: (1R,2S,3S,4R,6S)-4,6-DIAMINO-3-[(3-AMINO-3-DEOXY-ALPHA-D-GLUCOPYRANOSYL)OXY]-2-HYDROXYCYCLOHEXYL 2,6-DIAMINO-2,6-DIDEOXY-ALPHA-D-GLUCOPYRANOSIDE, DI(HYDROXYETHYL)ETHER, Kanamycin B dioxygenase, ... 著者 Mrugala, B, Niedzialkowska, E, Minor, W, Borowski, T. 登録日 2019-06-18 公開日 2020-07-08 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.36 Å) 主引用文献 A study on the structure, mechanism, and biochemistry of kanamycin B dioxygenase (KanJ)-an enzyme with a broad range of substrates. Febs J., 288, 2021
6THF	Crystal structure of two-domain Cu nitrite reductase from Bradyrhizobium sp. ORS 375 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, COPPER (II) ION, Copper-containing nitrite reductase, ... 著者 Sasaki, D, Watanabe, T.F, Eady, R.R, Garratt, R.C, Antonyuk, S.V, Hasnain, S.S. 登録日 2019-11-20 公開日 2020-04-22 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.47 Å) 主引用文献 Reverse protein engineering of a novel 4-domain copper nitrite reductase reveals functional regulation by protein-protein interaction. Febs J., 288, 2021
6R82	Crystal structure of the TLDc domain of Skywalker/TBC1D24 from Drosophila melanogaster 分子名称: GTPase-activating protein skywalker 著者 Fischer, B, Paesmans, J, Versees, W. 登録日 2019-03-30 公開日 2019-07-17 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.046 Å) 主引用文献 TBC1D24-TLDc-related epilepsy exercise-induced dystonia: rescue by antioxidants in a disease model. Brain, 142, 2019
6S0R	The crystal structure of kanamycin B dioxygenase (KanJ) from Streptomyces kanamyceticus complex with nickel, sulfate and chloride 分子名称: CHLORIDE ION, Kanamycin B dioxygenase, NICKEL (II) ION, ... 著者 Mrugala, B, Porebski, P.J, Niedzialkowska, E, Cymborowski, M.T, Minor, W, Borowski, T. 登録日 2019-06-18 公開日 2020-07-08 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 A study on the structure, mechanism, and biochemistry of kanamycin B dioxygenase (KanJ)-an enzyme with a broad range of substrates. Febs J., 288, 2021
6S1V	Crystal structure of dimeric M-PMV protease D26N mutant in complex with inhibitor 分子名称: Gag-Pro-Pol polyprotein, PRO-0A1-VAL-PSA-ALA-MET-THR 著者 Wosicki, S, Gilski, M, Jaskolski, M, Zabranska, H, Pichova, I. 登録日 2019-06-19 公開日 2019-10-16 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.64 Å) 主引用文献 Comparison of a retroviral protease in monomeric and dimeric states. Acta Crystallogr D Struct Biol, 75, 2019
6S0U	The crystal structure of kanamycin B dioxygenase (KanJ) from Streptomyces kanamyceticus in complex with nickel and 2-oxoglutarate 分子名称: 2-OXOGLUTARIC ACID, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ... 著者 Mrugala, B, Porebski, P.J, Niedzialkowska, E, Minor, W, Borowski, T. 登録日 2019-06-18 公開日 2020-07-08 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 A study on the structure, mechanism, and biochemistry of kanamycin B dioxygenase (KanJ)-an enzyme with a broad range of substrates. Febs J., 288, 2021
6S1U	Crystal structure of dimeric M-PMV protease C7A/D26N/C106A mutant in complex with inhibitor 分子名称: Gag-Pro-Pol polyprotein, PRO-0A1-VAL-PSA-ALA-MET-THR 著者 Wosicki, S, Gilski, M, Jaskolski, M, Zabranska, H, Pichova, I. 登録日 2019-06-19 公開日 2019-10-16 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Comparison of a retroviral protease in monomeric and dimeric states. Acta Crystallogr D Struct Biol, 75, 2019
6S1W	Crystal structure of dimeric M-PMV protease D26N mutant 分子名称: Gag-Pro-Pol polyprotein 著者 Wosicki, S, Gilski, M, Jaskolski, M, Zabranska, H, Pichova, I. 登録日 2019-06-19 公開日 2019-10-16 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.98 Å) 主引用文献 Comparison of a retroviral protease in monomeric and dimeric states. Acta Crystallogr D Struct Biol, 75, 2019
6S0T	The crystal structure of kanamycin B dioxygenase (KanJ) from Streptomyces kanamyceticus in complex with nickel, sulfate, soaked with iodide 分子名称: IODIDE ION, Kanamycin B dioxygenase, NICKEL (II) ION, ... 著者 Mrugala, B, Porebski, P.J, Niedzialkowska, E, Cymborowski, M.T, Minor, W, Borowski, T. 登録日 2019-06-18 公開日 2020-07-08 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 A study on the structure, mechanism, and biochemistry of kanamycin B dioxygenase (KanJ)-an enzyme with a broad range of substrates. Febs J., 288, 2021
6SGF	Molecular insight into a new low affinity xylan binding module CBM86, from the xylanolytic gut symbiont Roseburia intestinalis. 分子名称: Beta-xylanase, CADMIUM ION, CHLORIDE ION, ... 著者 Ejby, M, Abou Hachem, M, Leth, M.L, Guskov, A, Slotboom, D. 登録日 2019-08-04 公開日 2019-11-20 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (1.756 Å) 主引用文献 Molecular insight into a new low-affinity xylan binding module from the xylanolytic gut symbiont Roseburia intestinalis. Febs J., 287, 2020
5CFY	CRYSTAL STRUCTURE OF GLTPH R397A IN COMPLEX WITH NA+ AND L-ASP 分子名称: 425aa long hypothetical proton glutamate symport protein, ASPARTIC ACID, SODIUM ION 著者 Boudker, O, Oh, S. 登録日 2015-07-08 公開日 2016-04-20 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Coupled ion binding and structural transitions along the transport cycle of glutamate transporters. Elife, 3, 2014
5DT1	Crystal structure of human Fab CAP256-VRC26.25, a potent V1V2-directed HIV-1 broadly neutralizing antibody 分子名称: Fab Heavy chain of broadly neutralizing antibody VRC26.25, Fab Light chain of broadly neutralizing antibody VRC26.25, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 著者 Gorman, J, Kwong, P.D. 登録日 2015-09-17 公開日 2015-10-21 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.954 Å) 主引用文献 New Member of the V1V2-Directed CAP256-VRC26 Lineage That Shows Increased Breadth and Exceptional Potency. J.Virol., 90, 2015
7F3Y	Wild-type Plasmodium falciparum dihydrofolate reductase-thymidylate synthase (PfDHFR-TS) complexed with methotrexate (MTX), NADPH and dUMP 分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, Bifunctional dihydrofolate reductase-thymidylate synthase, GLYCEROL, ... 著者 Vanichtanankul, J, Tanramluk, D, Yuvaniyama, J, Yuthavong, Y. 登録日 2021-06-17 公開日 2021-09-22 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.252 Å) 主引用文献 MANORAA: A machine learning platform to guide protein-ligand design by anchors and influential distances. Structure, 30, 2022
7F3Z	Double mutant Plasmodium falciparum dihydrofolate reductase-thymidylate synthase (PfDHFR-TS-K1, C59R+S108N) complexed with Trimethoprim (TOP), NADPH and dUMP 分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, Bifunctional dihydrofolate reductase-thymidylate synthase, GLYCEROL, ... 著者 Vanichtanankul, J, Tanramluk, D, Chitnumsub, P, Yuvaniyama, J, Yuthavong, Y. 登録日 2021-06-17 公開日 2021-09-22 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 MANORAA: A machine learning platform to guide protein-ligand design by anchors and influential distances. Structure, 30, 2022
7B8E	Torpedo californica acetylcholinesterase complexed with Ca+2 分子名称: 1,2-ETHANEDIOL, 2-[2-(2-ethoxyethoxy)ethoxy]ethanol, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Silman, I, Shnyrov, V.L, Ashani, Y, Roth, E, Nicolas, A, Sussman, J.L. 登録日 2020-12-12 公開日 2021-03-17 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.23 Å) 主引用文献 Torpedo californica acetylcholinesterase is stabilized by binding of a divalent metal ion to a novel and versatile 4D motif. Protein Sci., 30, 2021
7DFS	Crystal structure of a novel 4-O-alpha-L-rhamnosyl-beta-D-glucuronidase from Fusarium oxysporum 12S - Rha-GlcA complex 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-O-alpha-L-rhamnosyl-beta-D-glucuronidase, alpha-D-mannopyranose, ... 著者 Kondo, T, Arakawa, T, Fushinobu, S, Sakamoto, T. 登録日 2020-11-09 公開日 2021-03-17 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.49 Å) 主引用文献 Biochemical and structural characterization of a novel 4-O-alpha-l-rhamnosyl-beta-d-glucuronidase from Fusarium oxysporum. Febs J., 288, 2021
7DFQ	Crystal Structure of a novel 4-O-alpha-L-rhamnosyl-beta-D-glucuronidase from Fusarium oxysporum 12S, ligand-free form 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-O-alpha-L-rhamnosyl-beta-D-glucuronidase 著者 Kondo, T, Arakawa, T, Fushinobu, S, Sakamoto, T. 登録日 2020-11-09 公開日 2021-03-17 最終更新日 2021-08-25 実験手法 X-RAY DIFFRACTION (1.51 Å) 主引用文献 Biochemical and structural characterization of a novel 4-O-alpha-l-rhamnosyl-beta-d-glucuronidase from Fusarium oxysporum. Febs J., 288, 2021
6FJ2	Structure of Thermolysin solved from SAD data collected at the peak of the Zn absorption edge on ID30B 分子名称: CALCIUM ION, DIMETHYL SULFOXIDE, LYSINE, ... 著者 McCarthy, A.A, Mueller-Dieckmann, C. 登録日 2018-01-19 公開日 2018-01-31 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.43 Å) 主引用文献 ID30B - a versatile beamline for macromolecular crystallography experiments at the ESRF. J Synchrotron Radiat, 25, 2018
6FJ9	Structure of Thaumatin collected from an in situ crystal on ID30B at 17.5 keV. 分子名称: L(+)-TARTARIC ACID, Thaumatin-1 著者 McCarthy, A.A, Mueller-Dieckmann, C. 登録日 2018-01-21 公開日 2018-01-31 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 ID30B - a versatile beamline for macromolecular crystallography experiments at the ESRF. J Synchrotron Radiat, 25, 2018
3J2W	Electron cryo-microscopy of Chikungunya virus 分子名称: Capsid protein, Glycoprotein E1, Glycoprotein E2 著者 Sun, S, Xiang, Y, Rossmann, M.G. 登録日 2013-01-28 公開日 2013-04-24 最終更新日 2018-07-18 実験手法 ELECTRON MICROSCOPY (5 Å) 主引用文献 Structural analyses at pseudo atomic resolution of Chikungunya virus and antibodies show mechanisms of neutralization. Elife, 2, 2013
3J4R	Pseudo-atomic model of the AKAP18-PKA Complex in a linear conformation derived from electron microscopy 分子名称: A-kinase anchor protein 18, cAMP-dependent protein kinase catalytic subunit alpha, cAMP-dependent protein kinase type II-alpha regulatory subunit 著者 Reichow, S.L, Gonen, T. 登録日 2013-09-25 公開日 2013-11-13 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (35 Å) 主引用文献 Intrinsic disorder within an AKAP-protein kinase A complex guides local substrate phosphorylation. Elife, 2, 2013
3J2Y	Electron Cryo-microscopy of Chikungunya VLP in complex with neutralizing antibody Fab 9.8B 分子名称: 9.8B heavy chain, 9.8B light chain 著者 Sun, S, Xiang, Y, Rossmann, M.G. 登録日 2013-01-28 公開日 2013-04-24 最終更新日 2018-07-18 実験手法 ELECTRON MICROSCOPY (14.9 Å) 主引用文献 Structural analyses at pseudo atomic resolution of Chikungunya virus and antibodies show mechanisms of neutralization. Elife, 2, 2013
6LCE	Crystal Structure of beta-L-arabinobiose binding protein - selenomethionine derivative 分子名称: ABC transporter substrate binding component, beta-L-arabinofuranose-(1-2)-alpha-L-arabinofuranose 著者 Miyake, M, Arakawa, T, Fushinobu, S. 登録日 2019-11-18 公開日 2020-04-22 最終更新日 2020-12-23 実験手法 X-RAY DIFFRACTION (1.78 Å) 主引用文献 Structural analysis of beta-L-arabinobiose-binding protein in the metabolic pathway of hydroxyproline-rich glycoproteins in Bifidobacterium longum. Febs J., 287, 2020
6LCF	Crystal Structure of beta-L-arabinobiose binding protein - native 分子名称: ABC transporter substrate binding component, beta-L-arabinofuranose-(1-2)-beta-L-arabinofuranose 著者 Miyake, M, Arakawa, T, Fushinobu, S. 登録日 2019-11-18 公開日 2020-04-22 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.92 Å) 主引用文献 Structural analysis of beta-L-arabinobiose-binding protein in the metabolic pathway of hydroxyproline-rich glycoproteins in Bifidobacterium longum. Febs J., 287, 2020

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