PDB: 462 件ウェブページステータス検索Chemie searchBIRD

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6FYY	Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C2) 分子名称: 18S ribosomal RNA, 40S ribosomal protein S0, 40S ribosomal protein S1, ... 著者 Llacer, J.L, Hussain, T, Gordiyenko, Y, Ramakrishnan, V. 登録日 2018-03-12 公開日 2018-12-05 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (3.02 Å) 主引用文献 Translational initiation factor eIF5 replaces eIF1 on the 40S ribosomal subunit to promote start-codon recognition. Elife, 7, 2018
6GMH	Structure of activated transcription complex Pol II-DSIF-PAF-SPT6 分子名称: CDC73, CTR9,RNA polymerase-associated protein CTR9 homolog,RNA polymerase-associated protein CTR9 homolog, DNA-directed RNA polymerase II subunit RPB9, ... 著者 Vos, S.M, Farnung, L, Boehing, M, Linden, A, Wigge, C, Urlaub, H, Cramer, P. 登録日 2018-05-26 公開日 2018-08-22 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structure of activated transcription complex Pol II-DSIF-PAF-SPT6. Nature, 560, 2018
6GYM	Structure of a yeast closed complex with distorted DNA (CCdist) 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Dienemann, C, Schwalb, B, Schilbach, S, Cramer, P. 登録日 2018-06-30 公開日 2018-12-05 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (6.7 Å) 主引用文献 Promoter Distortion and Opening in the RNA Polymerase II Cleft. Mol. Cell, 73, 2019
6GYL	Structure of a yeast closed complex with distorted DNA (core CCdist) 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Dienemann, C, Schwalb, B, Schilbach, S, Cramer, P. 登録日 2018-06-30 公開日 2018-12-05 最終更新日 2019-12-11 実験手法 ELECTRON MICROSCOPY (4.8 Å) 主引用文献 Promoter Distortion and Opening in the RNA Polymerase II Cleft. Mol. Cell, 73, 2019
6GSM	Structure of a partial yeast 48S preinitiation complex in open conformation. 分子名称: 18S ribosomal RNA, 40S ribosomal protein S0, 40S ribosomal protein S1, ... 著者 Llacer, J.L, Hussain, T, Gordiyenko, Y, Ramakrishnan, V. 登録日 2018-06-14 公開日 2019-07-31 最終更新日 2023-02-22 実験手法 ELECTRON MICROSCOPY (5.2 Å) 主引用文献 Large-scale movement of eIF3 domains during translation initiation modulate start codon selection. Nucleic Acids Res., 2021
6H4N	Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S1, ... 著者 Beckert, B, Turk, M, Czech, A, Berninghausen, O, Beckmann, R, Ignatova, Z, Plitzko, J, Wilson, N.D. 登録日 2018-07-22 公開日 2018-09-05 最終更新日 2018-10-24 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1. Nat Microbiol, 3, 2018
6GYK	Structure of a yeast closed complex (core CC1) 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Dienemann, C, Schwalb, B, Schilbach, S, Cramer, P. 登録日 2018-06-30 公開日 2018-12-05 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (5.1 Å) 主引用文献 Promoter Distortion and Opening in the RNA Polymerase II Cleft. Mol. Cell, 73, 2019
6H58	Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli Ribosome 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S1, ... 著者 Beckert, B, Turk, M, Czech, A, Berninghausen, O, Beckmann, R, Ignatova, Z, Plitzko, J, Wilson, D.N. 登録日 2018-07-24 公開日 2018-09-05 最終更新日 2018-10-24 実験手法 ELECTRON MICROSCOPY (7.9 Å) 主引用文献 Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1. Nat Microbiol, 3, 2018
6GSN	Structure of a partial yeast 48S preinitiation complex in closed conformation 分子名称: 18S rRNA (1798-MER), 40S ribosomal protein S0, 40S ribosomal protein S1, ... 著者 Llacer, J.L, Hussain, T, Ramakrishnan, V. 登録日 2018-06-14 公開日 2019-06-26 最終更新日 2021-10-27 実験手法 ELECTRON MICROSCOPY (5.75 Å) 主引用文献 Large-scale movement of eIF3 domains during translation initiation modulate start codon selection. Nucleic Acids Res., 2021
6GOV	Structure of THE RNA POLYMERASE LAMBDA-BASED ANTITERMINATION COMPLEX 分子名称: 30S ribosomal protein S10, Antitermination protein N, DNA (I), ... 著者 Loll, B, Krupp, F, Said, N, Huang, Y, Buerger, J, Mielke, T, Spahn, C.M.T, Wahl, M.C. 登録日 2018-06-04 公開日 2019-02-13 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Structural Basis for the Action of an All-Purpose Transcription Anti-termination Factor. Mol.Cell, 74, 2019
6FLQ	CryoEM structure of E.coli RNA polymerase paused elongation complex bound to NusA 分子名称: DNA (31-MER), DNA (39-MER), DNA-directed RNA polymerase subunit alpha, ... 著者 Guo, X, Weixlbaumer, A. 登録日 2018-01-26 公開日 2018-03-21 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structural Basis for NusA Stabilized Transcriptional Pausing. Mol. Cell, 69, 2018
6IR9	RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-1) of the nucleosome 分子名称: DNA (198-MER), DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit beta, ... 著者 Ehara, H, Kujirai, T, Fujino, Y, Shirouzu, M, Kurumizaka, H, Sekine, S. 登録日 2018-11-12 公開日 2019-02-20 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structural insight into nucleosome transcription by RNA polymerase II with elongation factors. Science, 363, 2019
6I3M	eIF2B:eIF2 complex, phosphorylated on eIF2 alpha serine 52. 分子名称: Eukaryotic translation initiation factor 2 subunit alpha, Eukaryotic translation initiation factor 2 subunit beta, Eukaryotic translation initiation factor 2 subunit gamma, ... 著者 Adomavicius, T, Roseman, A.M, Pavitt, G.D. 登録日 2018-11-06 公開日 2019-05-22 最終更新日 2019-11-06 実験手法 ELECTRON MICROSCOPY (3.93 Å) 主引用文献 The structural basis of translational control by eIF2 phosphorylation. Nat Commun, 10, 2019
6INQ	RNA polymerase II elongation complex stalled at SHL(-1) of the nucleosome, with foreign DNA (+1 position) 分子名称: DNA (198-MER), DNA (31-MER), DNA-directed RNA polymerase subunit, ... 著者 Kujirai, T, Ehara, H, Fujino, Y, Shirouzu, M, Sekine, S, Kurumizaka, H. 登録日 2018-10-26 公開日 2019-04-03 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (6.9 Å) 主引用文献 Structural basis of the nucleosome transition during RNA polymerase II passage. Science, 362, 2018
6ICZ	Cryo-EM structure of a human post-catalytic spliceosome (P complex) at 3.0 angstrom 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent RNA helicase DHX8, ... 著者 Zhang, X, Zhan, X, Yan, C, Shi, Y. 登録日 2018-09-07 公開日 2019-03-13 最終更新日 2020-10-14 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structures of the human spliceosomes before and after release of the ligated exon. Cell Res., 29, 2019
6I7T	eIF2B:eIF2 complex 分子名称: Eukaryotic translation initiation factor 2 subunit alpha, Eukaryotic translation initiation factor 2 subunit beta, Eukaryotic translation initiation factor 2 subunit gamma, ... 著者 Adomavicius, T, Guaita, M, Roseman, A.M, Pavitt, G.D. 登録日 2018-11-17 公開日 2019-05-22 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4.61 Å) 主引用文献 The structural basis of translational control by eIF2 phosphorylation. Nat Commun, 10, 2019
6Z9P	Transcription termination intermediate complex 1 分子名称: 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, ... 著者 Said, N, Hilal, T, Loll, B, Wahl, M.C. 登録日 2020-06-04 公開日 2020-11-04 最終更新日 2021-02-03 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Steps toward translocation-independent RNA polymerase inactivation by terminator ATPase rho. Science, 371, 2021
6Z9Q	Transcription termination intermediate complex 2 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA-directed RNA polymerase subunit alpha, ... 著者 Said, N, Hilal, T, Loll, B, Wahl, M.C. 登録日 2020-06-04 公開日 2020-11-04 最終更新日 2021-02-03 実験手法 ELECTRON MICROSCOPY (5.7 Å) 主引用文献 Steps toward translocation-independent RNA polymerase inactivation by terminator ATPase rho. Science, 371, 2021
6Z9R	Transcription termination intermediate complex 3 分子名称: 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, ... 著者 Said, N, Hilal, T, Loll, B, Wahl, M.C. 登録日 2020-06-04 公開日 2020-11-04 最終更新日 2021-02-03 実験手法 ELECTRON MICROSCOPY (4.1 Å) 主引用文献 Steps toward translocation-independent RNA polymerase inactivation by terminator ATPase rho. Science, 371, 2021
7ADE	Transcription termination complex IVa 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA-directed RNA polymerase subunit alpha, ... 著者 Said, N, Hilal, T, Loll, B, Wahl, C.M. 登録日 2020-09-14 公開日 2020-11-25 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Steps toward translocation-independent RNA polymerase inactivation by terminator ATPase rho. Science, 371, 2021
6ZP4	SARS-CoV-2 Nsp1 bound to a human 43S preinitiation ribosome complex - state 2 分子名称: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ... 著者 Thoms, M, Buschauer, R, Ameismeier, M, Denk, T, Kratzat, H, Mackens-Kiani, T, Cheng, J, Berninghausen, O, Becker, T, Beckmann, R. 登録日 2020-07-08 公開日 2020-07-29 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Structural basis for translational shutdown and immune evasion by the Nsp1 protein of SARS-CoV-2. Science, 369, 2020
6ZQC	Cryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state Pre-A1 分子名称: 13 kDa ribonucleoprotein-associated protein, 18S rRNA, 40S ribosomal protein S1-A, ... 著者 Cheng, J, Lau, B, Venuta, G.L, Berninghausen, O, Hurt, E, Beckmann, R. 登録日 2020-07-09 公開日 2020-09-23 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 90 S pre-ribosome transformation into the primordial 40 S subunit. Science, 369, 2020
6ZTJ	E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA) 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S1, ... 著者 Webster, M.W, Takacs, M, Weixlbaumer, A. 登録日 2020-07-20 公開日 2020-09-16 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structural basis of transcription-translation coupling and collision in bacteria. Science, 369, 2020
7AJU	Cryo-EM structure of the 90S-exosome super-complex (state Post-A1-exosome) 分子名称: 13 kDa ribonucleoprotein-associated protein, 18S rRNA, 40S ribosomal protein S1-A, ... 著者 Cheng, J, Lau, B, Flemming, D, Venuta, G.L, Berninghausen, O, Beckmann, R, Hurt, E. 登録日 2020-09-29 公開日 2020-12-30 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structure of the Maturing 90S Pre-ribosome in Association with the RNA Exosome. Mol.Cell, 81, 2021
7AJT	Cryo-EM structure of the 90S-exosome super-complex (state Pre-A1-exosome) 分子名称: 13 kDa ribonucleoprotein-associated protein, 18S rRNA, 40S ribosomal protein S1-A, ... 著者 Cheng, J, Lau, B, Flemming, D, Venuta, G.L, Berninghausen, O, Beckmann, R, Hurt, E. 登録日 2020-09-29 公開日 2020-12-30 最終更新日 2021-02-03 実験手法 ELECTRON MICROSCOPY (4.6 Å) 主引用文献 Structure of the Maturing 90S Pre-ribosome in Association with the RNA Exosome. Mol.Cell, 81, 2021

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