PDB: 221051 件ウェブページステータス検索Chemie searchBIRD

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9B39	Kainate receptor GluK2 in complex with agonist glutamate with asymmetric ligand-binding domain layer 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLUTAMIC ACID, ... 著者 Nadezhdin, K.D, Gangwar, S.P, Sobolevsky, A.I. 登録日 2024-03-18 公開日 2024-05-22 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (3.84 Å) 主引用文献 Kainate receptor channel opening and gating mechanism. Nature, 2024
9B38	Kainate receptor GluK2 in complex with agonist glutamate with pseudo 4-fold symmetrical ligand-binding domain layer 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLUTAMIC ACID, ... 著者 Nadezhdin, K.D, Gangwar, S.P, Sobolevsky, A.I. 登録日 2024-03-18 公開日 2024-05-22 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (3.36 Å) 主引用文献 Kainate receptor channel opening and gating mechanism. Nature, 2024
9B37	Open state of kainate receptor GluK2 in complex with agonist glutamate and positive allosteric modulator BPAM344 bound to one concanavalin A dimer. Composite map. 分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Nadezhdin, K.D, Gangwar, S.P, Sobolevsky, A.I. 登録日 2024-03-18 公開日 2024-05-22 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (6.66 Å) 主引用文献 Kainate receptor channel opening and gating mechanism. Nature, 2024
9B36	Open state of kainate receptor GluK2 in complex with agonist glutamate and positive allosteric modulator BPAM344 bound to two concanavalin A dimers. Composite map. 分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Nadezhdin, K.D, Gangwar, S.P, Sobolevsky, A.I. 登録日 2024-03-18 公開日 2024-05-22 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (4.29 Å) 主引用文献 Kainate receptor channel opening and gating mechanism. Nature, 2024
9B35	Ligand-binding and transmembrane domains of kainate receptor GluK2 in the open state, a complex with agonist glutamate and positive allosteric modulator BPAM344 分子名称: GLUTAMIC ACID, Glutamate receptor ionotropic, kainate 2 著者 Nadezhdin, K.D, Gangwar, S.P, Sobolevsky, A.I. 登録日 2024-03-18 公開日 2024-05-22 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Kainate receptor channel opening and gating mechanism. Nature, 2024
9B34	Structure of concanavalin A (ConA) dimer from the open-state structure of kainate receptor GluK2 in complex with agonist glutamate and positive allosteric modulator BPAM344 bound to two ConA dimers. Type I interface between GluK2 ligand-binding domain and ConA 分子名称: CALCIUM ION, Concanavalin A, ZINC ION 著者 Nadezhdin, K.D, Gangwar, S.P, Sobolevsky, A.I. 登録日 2024-03-18 公開日 2024-05-22 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (3.58 Å) 主引用文献 Kainate receptor channel opening and gating mechanism. Nature, 2024
9B33	Structure of concanavalin A (ConA) dimer from the open-state structure of kainate receptor GluK2 in complex with agonist glutamate and positive allosteric modulator BPAM344 bound to one ConA dimer. Type II interface between GluK2 ligand-binding domain and ConA 分子名称: CALCIUM ION, Concanavalin V, ZINC ION 著者 Nadezhdin, K.D, Gangwar, S.P, Sobolevsky, A.I. 登録日 2024-03-18 公開日 2024-05-22 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (4.07 Å) 主引用文献 Kainate receptor channel opening and gating mechanism. Nature, 2024
9B27	Dia1 at the Barbed End of F-Actin 分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ... 著者 Palmer, N.J, Barrie, K.R, Dominguez, R. 登録日 2024-03-14 公開日 2024-05-29 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.51 Å) 主引用文献 Mechanisms of actin filament severing and elongation by formins Nature, 2024
9B22	Crystal structure of ADP-ribose diphosphatase from Klebsiella pneumoniae (ADP Ribose and AMP bound) 分子名称: ADENOSINE MONOPHOSPHATE, ADP-ribose pyrophosphatase, MAGNESIUM ION, ... 著者 Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2024-03-14 公開日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Crystal structure of ADP-ribose diphosphatase from Klebsiella pneumoniae (ADP Ribose and AMP bound) To be published
9B21	Crystal structure of ADP-ribose diphosphatase from Klebsiella pneumoniae (ADP Ribose bound, Orthorhombic P form) 分子名称: ADP-ribose pyrophosphatase, MAGNESIUM ION, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE 著者 Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2024-03-14 公開日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Crystal structure of ADP-ribose diphosphatase from Klebsiella pneumoniae (ADP Ribose bound, Orthorhombic P form) To be published
9B20	Crystal structure of ADP-ribose diphosphatase from Klebsiella pneumoniae (AMP bound) 分子名称: ADENOSINE MONOPHOSPHATE, ADP-ribose pyrophosphatase, MAGNESIUM ION 著者 Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2024-03-14 公開日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Crystal structure of ADP-ribose diphosphatase from Klebsiella pneumoniae (AMP bound) To be published
9B1Z	Crystal structure of ADP-ribose diphosphatase from Klebsiella pneumoniae (Apo) 分子名称: ADP-ribose pyrophosphatase, SODIUM ION 著者 Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2024-03-14 公開日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.25 Å) 主引用文献 Crystal structure of ADP-ribose diphosphatase from Klebsiella pneumoniae (Apo) To be published
9B1R	Functional implication of the homotrimeric multidomain vacuolar sorting receptor 1 from Arabidopsis thaliana 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Vacuolar-sorting receptor 1 著者 Park, H, Youn, B, Park, D.J, Puthanveettil, S.V, Kang, C. 登録日 2024-03-13 公開日 2024-05-15 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Functional implication of the homotrimeric multidomain vacuolar sorting receptor 1 (VSR1) from Arabidopsis thaliana. Sci Rep, 14, 2024
9B0M	Crystal structure of Macrophage migration inhibitory factor from Plasmodium vivax 分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, L-dopachrome isomerase 著者 Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2024-03-12 公開日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Crystal structure of Macrophage migration inhibitory factor from Plasmodium vivax To be published
9B0K	INF2 in the Middle of F-Actin (Down state) 分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ... 著者 Palmer, N.J, Barrie, K.R, Dominguez, R. 登録日 2024-03-12 公開日 2024-05-29 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.03 Å) 主引用文献 Mechanisms of actin filament severing and elongation by formins Nature, 2024
9B03	INF2 in the Middle of F-Actin (Up state) 分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ... 著者 Palmer, N.J, Barrie, K.R, Dominguez, R. 登録日 2024-03-11 公開日 2024-05-29 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (2.95 Å) 主引用文献 Mechanisms of actin filament severing and elongation by formins Nature, 2024
9AZZ	Crystal structure of outer membrane lipoprotein carrier protein (LolA) from Ehrlichia ruminantium 分子名称: GLYCEROL, Outer membrane lipoprotein carrier protein LolA, TETRAETHYLENE GLYCOL 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2024-03-11 公開日 2024-03-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structure of outer membrane lipoprotein carrier protein (LolA) from Ehrlichia ruminantium To be published
9AZX	Crystal structure of SARS-CoV-2 (Covid-19) Nsp3 macrodomain in complex with NDPr 分子名称: Non-structural protein 3, {(2R,3S,4R,5R)-5-[(8S)-4-aminopyrrolo[2,1-f][1,2,4]triazin-7-yl]-5-cyano-3,4-dihydroxyoxolan-2-yl}methyl [(2R,3S,4R,5R)-3,4,5-trihydroxyoxolan-2-yl]methyl dihydrogen diphosphate 著者 Wallace, S.D, Bagde, S.R, Fromme, J.C. 登録日 2024-03-11 公開日 2024-05-01 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (1.395 Å) 主引用文献 GS-441524-Diphosphate-Ribose Derivatives as Nanomolar Binders and Fluorescence Polarization Tracers for SARS-CoV-2 and Other Viral Macrodomains. Acs Chem.Biol., 19, 2024
9AZQ	INF2 at the Barbed End of F-Actin with Incoming Actin 分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ... 著者 Palmer, N.J, Barrie, K.R, Dominguez, R. 登録日 2024-03-11 公開日 2024-05-29 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.82 Å) 主引用文献 Mechanisms of actin filament severing and elongation by formins Nature, 2024
9AZP	INF2 at the Barbed End of F-Actin with Incoming Profilin-Actin 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Actin, ... 著者 Palmer, N.J, Barrie, K.R, Dominguez, R. 登録日 2024-03-11 公開日 2024-05-29 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.79 Å) 主引用文献 Mechanisms of actin filament severing and elongation by formins Nature, 2024
9AZI	NMR solution structure of cell-permeant miniature protein ZF5.3 分子名称: Designed Zinc finger protein 5.3, ZINC ION 著者 Giudice, J.A, Kelly, M, Schepartz, A. 登録日 2024-03-11 公開日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Structural and mechanistic basis for efficient endosomal escape by designed mini-proteins To be published
9AZ9	Chloride Sites in Photoactive Yellow Protein (Chloride-Free Reference Structure) 分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein 著者 Dyda, F, Schotte, F, Anfinrud, P, Cho, H.S. 登録日 2024-03-10 公開日 2024-03-20 最終更新日 2024-04-24 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Watching a signaling protein function: What has been learned over four decades of time-resolved studies of photoactive yellow protein. Struct Dyn., 11, 2024
9AZ7	Chloride Sites in Photoactive Yellow Protein 分子名称: 4'-HYDROXYCINNAMIC ACID, CHLORIDE ION, Photoactive yellow protein 著者 Dyda, F, Schotte, F, Anfinrud, P, Cho, H.S. 登録日 2024-03-10 公開日 2024-03-20 最終更新日 2024-04-24 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Watching a signaling protein function: What has been learned over four decades of time-resolved studies of photoactive yellow protein. Struct Dyn., 11, 2024
9AZ4	INF2 at the Barbed End of F-Actin 分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ... 著者 Palmer, N.J, Barrie, K.R, Dominguez, R. 登録日 2024-03-10 公開日 2024-05-29 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.37 Å) 主引用文献 Mechanisms of actin filament severing and elongation by formins Nature, 2024
9AYY	SARS-CoV-2 Omicron-EG.5.1 3-RBD down Spike Protein Trimer 3 (S-GSAS-Omicron-EG.5.1) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein 著者 Zhang, Q.E, Acharya, P. 登録日 2024-03-08 公開日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 SARS-CoV-2 Omicron-EG.5.1 3-RBD down Spike Protein Trimer 3 (S-GSAS-Omicron-EG.5.1) To Be Published

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