PDB: 47120 件ウェブページステータス検索Chemie searchBIRD

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2XP3	DISCOVERY OF CELL-ACTIVE PHENYL-IMIDAZOLE PIN1 INHIBITORS BY STRUCTURE-GUIDED FRAGMENT EVOLUTION 分子名称: 5-(2-METHOXYPHENYL)-2-FUROIC ACID, DODECAETHYLENE GLYCOL, PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1 著者 Potter, A, Oldfield, V, Nunns, C, Fromont, C, Ray, S, Northfield, C.J, Bryant, C.J, Scrace, S.F, Robinson, D, Matossova, N, Baker, L, Dokurno, P, Surgenor, A.E, Davis, B.E, Richardson, C.M, Murray, J.B, Moore, J.D. 登録日 2010-08-25 公開日 2011-01-12 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Discovery of Cell-Active Phenyl-Imidazole Pin1 Inhibitors by Structure-Guided Fragment Evolution. Bioorg.Med.Chem.Lett., 20, 2010
7SMB	[U:Ag+/Ag+:U--pH 11] Metal-mediated DNA base pair in tensegrity triangle in Ag+ and Hg2+ solution 分子名称: DNA (5'-D(*GP*AP*GP*CP*AP*GP*CP*CP*TP*GP*TP*UP*TP*GP*GP*AP*CP*AP*TP*CP*A)-3'), DNA (5'-D(P*CP*CP*AP*UP*AP*CP*A)-3'), DNA (5'-D(P*CP*TP*GP*AP*TP*GP*T)-3'), ... 著者 Lu, B, Vecchioni, S, Seeman, N.C, Sha, R, Ohayon, Y.P. 登録日 2021-10-25 公開日 2022-11-23 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (4.63 Å) 主引用文献 Heterobimetallic Base Pair Programming in Designer 3D DNA Crystals. J.Am.Chem.Soc., 145, 2023
2MF6	Solution NMR structure of Chimeric Avidin, ChiAVD(I117Y), in the biotin bound form 分子名称: Avidin, Avidin-related protein 4/5 著者 Tossavainen, H, Kukkurainen, S, Maatta, J.A.E, Pihlajamaa, T, Hytonen, V.P, Kulomaa, M.S, Permi, P. 登録日 2013-10-07 公開日 2014-08-06 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Chimeric Avidin - NMR Structure and Dynamics of a 56 kDa Homotetrameric Thermostable Protein Plos One, 9, 2014
5KXJ	Crystal Structure of L-Aspartate Oxidase from Salmonella typhimurium in the Complex with Substrate L-Aspartate 分子名称: 1,2-ETHANEDIOL, ASPARTIC ACID, GLYCEROL, ... 著者 Kim, Y, Osipiuk, J, Mulligan, R, Makowska-Grzyska, M, Maltseva, N, Shatsman, S, Gu, M, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2016-07-20 公開日 2016-08-03 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.87 Å) 主引用文献 Crystal Structure of L-Aspartate Oxidase from Salmonella typhimurium in the Complex with Substrate L-Aspartate To Be Published
2M1A	HIV-1 Rev ARM peptide (residues T34-R50) 分子名称: HIV-1 Rev arginine-rich motif (ARM) 著者 Casu, F, Duggan, B.M, Hennig, M. 登録日 2012-11-21 公開日 2013-09-11 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 The Arginine-Rich RNA-Binding Motif of HIV-1 Rev Is Intrinsically Disordered and Folds upon RRE Binding. Biophys.J., 105, 2013
2Y3X	Catalytic domain of mouse 2',3'-cyclic nucleotide 3'- phosphodiesterase, complexed with sulfate 分子名称: 2', 3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE, GLYCEROL, ... 著者 Myllykoski, M, Kursula, P. 登録日 2011-01-04 公開日 2012-01-25 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Myelin 2',3'-Cyclic Nucleotide 3'-Phosphodiesterase: Active-Site Ligand Binding and Molecular Conformation. Plos One, 7, 2012
7QBP	Crystal structure of R2-like ligand-binding oxidase from Saccharopolyspora Erythraea 分子名称: FE (III) ION, MANGANESE (III) ION, PALMITIC ACID, ... 著者 Srinivas, V, Diamanti, R, Lebrette, H, Hogbom, M. 登録日 2021-11-19 公開日 2022-04-06 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.38 Å) 主引用文献 Comparative structural analysis provides new insights into the function of R2-like ligand-binding oxidase. Febs Lett., 596, 2022
7QGQ	Extended H/L (SLPH/SLPL) complex from C. difficile (CD630 strain) fit into R20291 S-layer negative stain map 分子名称: Precursor of the S-layer proteins 著者 Banerji, O, Wilson, J.S, Bullough, P.A. 登録日 2021-12-09 公開日 2022-04-06 最終更新日 2024-07-17 実験手法 ELECTRON CRYSTALLOGRAPHY 主引用文献 Structure and assembly of the S-layer in C. difficile. Nat Commun, 13, 2022
7F2B	Crystal structure of SARS-CoV-2 nucleocapsid protein C-terminal RNA binding domain at 2.0A resolution 分子名称: CHLORIDE ION, Nucleoprotein, PHOSPHATE ION 著者 Liu, C, Chen, Y.W. 登録日 2021-06-10 公開日 2021-09-01 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structures of the SARS-CoV-2 nucleocapsid protein C-terminal domain and development of nucleocapsid-targeting nanobodies. Febs J., 289, 2022
7ATV	Structure of protein kinase ck2 catalytic subunit (csnk2a2 gene product) in complex with the bivalent inhibitor KN2 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Casein kinase II subunit alpha', ... 著者 Lindenblatt, D, Applegate, V, Nickelsen, A, Klussmann, M, Neundorf, I, Goetz, C, Jose, J, Niefind, K. 登録日 2020-10-31 公開日 2021-08-04 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (0.98 Å) 主引用文献 Molecular Plasticity of Crystalline CK2 alpha ' Leads to KN2, a Bivalent Inhibitor of Protein Kinase CK2 with Extraordinary Selectivity. J.Med.Chem., 65, 2022
5L0A	Human muscle fructose-1,6-bisphosphatase E69Q mutant in active R-state in complex with fructose-1,6-bisphosphate 分子名称: 1,6-di-O-phosphono-beta-D-fructofuranose, Fructose-1,6-bisphosphatase isozyme 2 著者 Barciszewski, J, Wisniewski, J, Kolodziejczyk, R, Dzugaj, A, Jaskolski, M, Rakus, D. 登録日 2016-07-27 公開日 2017-08-16 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.302 Å) 主引用文献 Structural studies of human muscle FBPase To Be Published
2Y5Q	Listeria monocytogenes InlB (internalin B) residues 36-392 分子名称: INTERNALIN B, ZINC ION 著者 Ebbes, M, Niemann, H.H. 登録日 2011-01-17 公開日 2011-02-23 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Fold and Function of the Inlb B-Repeat. J.Biol.Chem., 286, 2011
7ESX	Crystal structure of Wolbachia cytoplasmic incompatibility factor CidA from wPip 分子名称: Bacteria factor 1 著者 Xiao, Y.J, Wang, W, Chen, X, Ji, X.Y, Yang, H.T. 登録日 2021-05-12 公開日 2021-11-10 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural and mechanistic insights into the complexes formed by Wolbachia cytoplasmic incompatibility factors. Proc.Natl.Acad.Sci.USA, 118, 2021
7ATG	Crystal structure of Z-DNA in complex with putrescinium and potassium cations at ultrahigh-resolution 分子名称: 4-azaniumylbutylazanium, DNA (5'-D(*CP*GP*CP*GP*CP*G)-3'), POTASSIUM ION 著者 Drozdzal, P, Gilski, M, Jaskolski, M. 登録日 2020-10-30 公開日 2021-08-11 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (0.6 Å) 主引用文献 Crystal structure of Z-DNA in complex with the polyamine putrescine and potassium cations at ultra-high resolution. Acta Crystallogr.,Sect.B, 77, 2021
7ESY	Crystal structure of the complex formed by Wolbachia cytoplasmic incompatibility factors CidA and CidBND1-ND2 from wPip 分子名称: Bacteria factor 1, CALCIUM ION, ULP_PROTEASE domain-containing protein 著者 Xiao, Y.J, Wang, W, Chen, X, Ji, X.Y, Yang, H.T. 登録日 2021-05-12 公開日 2021-11-10 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.297 Å) 主引用文献 Structural and mechanistic insights into the complexes formed by Wolbachia cytoplasmic incompatibility factors. Proc.Natl.Acad.Sci.USA, 118, 2021
7ATM	Structure of P. aeruginosa PBP3 in complex with a phenyl boronic acid (Compound 1) 分子名称: (3-(1H-tetrazol-5-yl)phenyl)boronic acid, DIMETHYL SULFOXIDE, GLYCEROL, ... 著者 Newman, H, Bellini, B, Dowson, C.G. 登録日 2020-10-30 公開日 2021-08-11 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.582 Å) 主引用文献 High-Throughput Crystallography Reveals Boron-Containing Inhibitors of a Penicillin-Binding Protein with Di- and Tricovalent Binding Modes. J.Med.Chem., 64, 2021
7T17	Zika Virus asymmetric unit bound with IgM antibody DH1017 Fab fragment 分子名称: Core protein, DH1017.IgM FabC constant domain, DH1017.IgM IgH, ... 著者 Miller, A.S, Kuhn, R.J. 登録日 2021-12-01 公開日 2022-11-23 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (5.26 Å) 主引用文献 A Zika virus-specific IgM elicited in pregnancy exhibits ultrapotent neutralization. Cell, 185, 2022
3I9P	Crystal structure of human transthyretin - wild type 分子名称: Transthyretin 著者 Lima, L.M.T.R, Foguel, D. 登録日 2009-07-12 公開日 2009-10-20 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structure of human transthyretin - wild type To be Published
7ATO	Structure of P. aeruginosa PBP3 in complex with an aryl boronic acid (Compound 2) 分子名称: (5-methyl-1H-indazol-6-yl)boronic acid, DIMETHYL SULFOXIDE, GLYCEROL, ... 著者 Newman, H, Bellini, B, Dowson, C.G. 登録日 2020-10-30 公開日 2021-08-11 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.587 Å) 主引用文献 High-Throughput Crystallography Reveals Boron-Containing Inhibitors of a Penicillin-Binding Protein with Di- and Tricovalent Binding Modes. J.Med.Chem., 64, 2021
7AU0	Structure of P. aeruginosa PBP3 in complex with a benzoxaborole (Compound 7) 分子名称: Peptidoglycan D,D-transpeptidase FtsI, methyl (R)-2-(1-hydroxy-1,3-dihydrobenzo[c][1,2]oxaborole-6-carboxamido)-2-phenylacetate 著者 Newman, H, Bellini, B, Dowson, C.G. 登録日 2020-11-02 公開日 2021-08-11 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.17 Å) 主引用文献 High-Throughput Crystallography Reveals Boron-Containing Inhibitors of a Penicillin-Binding Protein with Di- and Tricovalent Binding Modes. J.Med.Chem., 64, 2021
5L1R	X-ray Structure of the Substrate-free Cytochrome P450 PntM 分子名称: BICINE, PROTOPORPHYRIN IX CONTAINING FE, Pentalenolactone synthase 著者 Duan, L, Jogl, G, Cane, D.E. 登録日 2016-07-29 公開日 2016-09-14 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 The Cytochrome P450-Catalyzed Oxidative Rearrangement in the Final Step of Pentalenolactone Biosynthesis: Substrate Structure Determines Mechanism. J.Am.Chem.Soc., 138, 2016
7ESZ	Crystal structure of the complex formed by Wolbachia cytoplasmic incompatibility factors CinA and CinB with Mn2+ from wPip 分子名称: BACTERIA FACTOR A, BACTERIA FACTOR B, MANGANESE (II) ION 著者 Xiao, Y.J, Wang, W, Chen, X, Ji, X.Y, Yang, H.T. 登録日 2021-05-12 公開日 2021-11-10 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.476 Å) 主引用文献 Structural and mechanistic insights into the complexes formed by Wolbachia cytoplasmic incompatibility factors. Proc.Natl.Acad.Sci.USA, 118, 2021
2IPH	X-ray Structure at 1.75 A Resolution of a Norovirus Protease Linked to an Active Site Directed Peptide Inhibitor 分子名称: N-ACETYL-L-ALPHA-GLUTAMYL-L-PHENYLALANYL-L-GLUTAMINYL-N-[(1S)-4-AMINO-1-(2-CARBOXYETHYL)-4-OXOBUTYL]-L-LEUCINAMIDE, Thiol protease P3C 著者 Hussey, R.J. 登録日 2006-10-12 公開日 2007-10-23 最終更新日 2012-06-20 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 A Structural Study of Norovirus 3C Protease Specificity: Binding of a Designed Active Site-Directed Peptide Inhibitor. Biochemistry, 50, 2011
7ATX	Structure of P. aeruginosa PBP3 in complex with a benzoxaborole (Compound 4) 分子名称: 4-(1-hydroxy-1,3-dihydrobenzo[c][1,2]oxaborole-6-carbonyl)-1,3,3-trimethylpiperazin-2-one, Peptidoglycan D,D-transpeptidase FtsI 著者 Newman, H, Bellini, B, Dowson, C.G. 登録日 2020-11-01 公開日 2021-08-11 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.795 Å) 主引用文献 High-Throughput Crystallography Reveals Boron-Containing Inhibitors of a Penicillin-Binding Protein with Di- and Tricovalent Binding Modes. J.Med.Chem., 64, 2021
5L1U	X-ray Structure of M81A mutant of Cytochrome P450 PntM with pentalenolactone F 分子名称: PROTOPORPHYRIN IX CONTAINING FE, Pentalenolactone synthase, pentalenolactone F 著者 Duan, L, Jogl, G, Cane, D.E. 登録日 2016-07-29 公開日 2016-09-14 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.074 Å) 主引用文献 The Cytochrome P450-Catalyzed Oxidative Rearrangement in the Final Step of Pentalenolactone Biosynthesis: Substrate Structure Determines Mechanism. J.Am.Chem.Soc., 138, 2016

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