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7AVC
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DoBi scaffold based on PIH1D1 N-terminal domain
分子名称: GLYCEROL, PIH1 domain-containing protein 1, SODIUM ION
著者Kolenko, P, Pham, N.P, Pavlicek, J, Mikulecky, P, Schneider, B.
登録日2020-11-05
公開日2021-02-10
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Protein Binder (ProBi) as a New Class of Structurally Robust Non-Antibody Protein Scaffold for Directed Evolution.
Viruses, 13, 2021
7EAV
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BU of 7eav by Molmil
The X-ray crystallographic structure of glycogen debranching enzyme from Sulfolobus solfataricus STB09
分子名称: Glycogen debranching enzyme
著者Li, Z.F, Ban, X.F, Tian, Y.X, Li, C.M, Cheng, L, Hong, Y, Gu, Z.B.
登録日2021-03-08
公開日2022-03-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.803 Å)
主引用文献The X-ray Crystallographic Structure of Debranching Enzyme from Sulfolobus solfataricus STB09
To Be Published
8OZL
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In situ cryoEM structure of the Prototype Foamy Virus capsid, pentamer localised reconstruction
分子名称: Gag polyprotein
著者Calcraft, T, Nans, A, Rosenthal, P.B.
登録日2023-05-09
公開日2024-07-10
最終更新日2024-08-21
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Integrated cryoEM structure of a spumaretrovirus reveals cross-kingdom evolutionary relationships and the molecular basis for assembly and virus entry.
Cell, 187, 2024
2MF0
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Structural basis of the non-coding RNA RsmZ acting as protein sponge: Conformer L of RsmZ(1-72)/RsmE(dimer) 1to3 complex
分子名称: Carbon storage regulator homolog, RNA_(72-MER)
著者Duss, O, Michel, E, Yulikov, M, Schubert, M, Jeschke, G, Allain, F.H.-T.
登録日2013-10-02
公開日2014-05-21
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural basis of the non-coding RNA RsmZ acting as a protein sponge.
Nature, 509, 2014
2M3O
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BU of 2m3o by Molmil
Structure and dynamics of a human Nedd4 WW domain-ENaC complex
分子名称: Amiloride-sensitive sodium channel subunit alpha, E3 ubiquitin-protein ligase NEDD4
著者Bobby, R, Medini, K, Neudecker, P, Lee, V, MacDonald, F.J, Brimble, M.A, Lott, J, Dingley, A.J.
登録日2013-01-23
公開日2013-08-28
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure and dynamics of human Nedd4-1 WW3 in complex with the alpha ENaC PY motif.
Biochim.Biophys.Acta, 1834, 2013
7KUT
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Crystal Structure of Danio rerio Histone Deacetylase 10 H137A Mutant in Complex with N-Acetylputrescine (Tetrahedral Intermediate)
分子名称: 1,2-ETHANEDIOL, 1-[(4-aminobutyl)amino]ethane-1,1-diol, DI(HYDROXYETHYL)ETHER, ...
著者Herbst-Gervasoni, C.J, Christianson, D.W.
登録日2020-11-25
公開日2021-02-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献X-ray Crystallographic Snapshots of Substrate Binding in the Active Site of Histone Deacetylase 10.
Biochemistry, 60, 2021
7PRL
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MUC2 D1 with Cu(II)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, COPPER (II) ION, GLYCEROL, ...
著者Reznik, N, Fass, D.
登録日2021-09-22
公開日2022-10-26
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Intestinal mucin is a chaperone of multivalent copper.
Cell, 185, 2022
8OZK
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BU of 8ozk by Molmil
In situ cryoEM structure of the Prototype Foamy Virus capsid, icosahedral map
分子名称: Gag polyprotein
著者Calcraft, T, Nans, A, Rosenthal, P.B.
登録日2023-05-09
公開日2024-07-10
最終更新日2024-08-21
実験手法ELECTRON MICROSCOPY (3.89 Å)
主引用文献Integrated cryoEM structure of a spumaretrovirus reveals cross-kingdom evolutionary relationships and the molecular basis for assembly and virus entry.
Cell, 187, 2024
5L1E
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AMPA subtype ionotropic glutamate receptor GluA2 in complex with noncompetitive inhibitor CP465022
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-(2-chlorophenyl)-2-(2-{6-[(diethylamino)methyl]pyridin-2-yl}ethyl)-6-fluoroquinazolin-4(3H)-one, Glutamate receptor 2
著者Yelshanskaya, M.V, Singh, A.K, Sampson, J.M, Sobolevsky, A.I.
登録日2016-07-29
公開日2016-10-19
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (4.37 Å)
主引用文献Structural Bases of Noncompetitive Inhibition of AMPA-Subtype Ionotropic Glutamate Receptors by Antiepileptic Drugs.
Neuron, 91, 2016
7KRF
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BU of 7krf by Molmil
Crystal Structure of HIV-1 Reverse Transcriptase in Complex with (E)-4-(3-(2-cyanovinyl)-5-fluorophenoxy)-3-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)phenyl sulfurofluoridate (JLJ710)
分子名称: 4-{3-[(E)-2-cyanoethenyl]-5-fluorophenoxy}-3-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]phenyl sulfurofluoridate, HIV-1 REVERSE TRANSCRIPTASE, P51 SUBUNIT, ...
著者Bertoletti, N, Ippolito, J.A, Jorgensen, W.L, Anderson, K.S.
登録日2020-11-19
公開日2021-01-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Covalent Inhibition of Wild-Type HIV-1 Reverse Transcriptase Using a Fluorosulfate Warhead.
Acs Med.Chem.Lett., 12, 2021
3ITO
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BU of 3ito by Molmil
Crystal structure of Pseudomonas stutzeri L-rhamnose isomerase mutant D327N in complex with D-psicose
分子名称: L-rhamnose isomerase, MANGANESE (II) ION, alpha-D-psicofuranose
著者Yoshida, H, Yamaji, M, Ishii, T, Izumori, K, Kamitori, S.
登録日2009-08-28
公開日2010-02-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Catalytic reaction mechanism of Pseudomonas stutzeri l-rhamnose isomerase deduced from X-ray structures
Febs J., 277, 2010
7EC9
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Structure of the Thermotoga maritima Family 5 endo-glucanase in complex with 1-deoxynojiromycin
分子名称: 1-DEOXYNOJIRIMYCIN, Endoglucanase, ISOPROPYL ALCOHOL
著者Manoj, N, Garg, P.
登録日2021-03-11
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of an iminosugar complex of a glycoside hydrolase family 5 lichenase provides insights into the active site.
Biochimie, 204, 2023
7KSL
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Substrate-free human mitochondrial LONP1
分子名称: ADENOSINE-5'-DIPHOSPHATE, Lon protease homolog, mitochondrial
著者Shin, M, Watson, E.R, Song, A.S, Mindrebo, J.T, Novick, S.R, Griffin, P, Wiseman, R.L, Lander, G.C.
登録日2020-11-23
公開日2020-12-09
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structures of the human LONP1 protease reveal regulatory steps involved in protease activation.
Nat Commun, 12, 2021
7L0V
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BU of 7l0v by Molmil
Human Bocavirus 2 (pH 7.4)
分子名称: VP2
著者Luo, M, Mietzsch, M, Agbandje-McKenna, M.
登録日2020-12-13
公開日2021-01-27
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.71 Å)
主引用文献pH-Induced Conformational Changes of Human Bocavirus Capsids.
J.Virol., 95, 2021
3IUB
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BU of 3iub by Molmil
Crystal structure of pantothenate synthetase from Mycobacterium tuberculosis in complex with 5-Methoxy-N-(5-methylpyridin-2-ylsulfonyl)-1H-indole-2-carboxamide
分子名称: 1,2-ETHANEDIOL, 5-methoxy-N-[(5-methylpyridin-2-yl)sulfonyl]-1H-indole-2-carboxamide, ETHANOL, ...
著者Silvestre, H.L, Hung, A.W, Wen, S, Ciulli, A, Blundell, T.L, Abell, C.
登録日2009-08-31
公開日2009-10-13
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Application of fragment growing and fragment linking to the discovery of inhibitors of Mycobacterium tuberculosis pantothenate synthetase.
Angew.Chem.Int.Ed.Engl., 48, 2009
2IUO
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Site Directed Mutagenesis of Key Residues Involved in the Catalytic Mechanism of Cyanase
分子名称: AZIDE ION, BROMIDE ION, CHLORIDE ION, ...
著者Guilloton, M, Walsh, M.A, Joachimiak, A, Anderson, M.P.
登録日2006-06-06
公開日2006-06-08
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A Twin Set of Low Pka Arginines Ensures the Concerted Acid Base Catalytic Mechanism of Cyanase
To be Published
7Q41
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Crystal structure of RCC1-Like domain 2 of ubiquitin ligase HERC2 in complex with DXDKDED motif of ubiquitin-protein ligase E3A (E6AP)
分子名称: CITRIC ACID, E3 ubiquitin-protein ligase HERC2, Ubiquitin-protein ligase E3A (E6AP) peptide
著者Demenge, A, Howard, E, Cousido-Siah, A, Mitschler, A, Podjarny, A, McEwen, A.G, Trave, G.
登録日2021-10-29
公開日2022-11-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.01478052 Å)
主引用文献Crystal structure of RCC1-Like domain 2 of ubiquitin ligase HERC2 in complex with DXDKDED motif of ubiquitin-protein ligase E3A (E6AP)
To Be Published
7AH4
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Crystal structure of indoleamine 2,3-dioxygenase 1 (IDO1) in complex with ferric heme and MMG-0363
分子名称: 4-chloranyl-2-(2~{H}-1,2,3-triazol-4-yl)aniline, Indoleamine 2,3-dioxygenase 1, PROTOPORPHYRIN IX CONTAINING FE
著者Roehrig, U.F, Reynaud, A, Pojer, F, Michielin, O, Zoete, V.
登録日2020-09-24
公開日2021-02-17
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.401 Å)
主引用文献Azole-Based Indoleamine 2,3-Dioxygenase 1 (IDO1) Inhibitors.
J.Med.Chem., 64, 2021
7Q54
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Single Particle Cryo-EM structure of photosynthetic A4B4-glyceraldehyde 3-phosphate dehydrogenase from Spinacia oleracia.
分子名称: Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic, Glyceraldehyde-3-phosphate dehydrogenase B, ...
著者Marotta, R, Fermani, S, Sparla, F, Trost, P, Del Giudice, A.
登録日2021-11-02
公開日2022-11-16
実験手法ELECTRON MICROSCOPY (8.9 Å)
主引用文献Unravelling the regulation pathway of photosynthetic AB-GAPDH.
Acta Crystallogr D Struct Biol, 78, 2022
8POH
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BU of 8poh by Molmil
Influenza A/H7N9 polymerase symmetric dimer bound to the promoter (PA K289A/C489R)
分子名称: 51-mer vRNA loop (v51_mut_S), MAGNESIUM ION, Polymerase acidic protein, ...
著者Arragain, B, Cusack, S.
登録日2023-07-04
公開日2024-02-21
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献The host RNA polymerase II C-terminal domain is the anchor for replication of the influenza virus genome.
Nat Commun, 15, 2024
2ZWY
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BU of 2zwy by Molmil
alpha-L-fucosidase
分子名称: Alpha-L-fucosidase, putative
著者Wu, H.-J, Ko, T.-P, Ho, C.-W, Lin, C.-H, Wang, A.H.-J.
登録日2008-12-18
公開日2009-12-08
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structural Basis of alpha-Fucosidase Inhibition by Iminocyclitols with Ki Ranging from Micro- to Picomolar
To be Published
7AH6
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BU of 7ah6 by Molmil
Crystal structure of indoleamine 2,3-dioxygenase 1 (IDO1) in complex with ferric heme and MMG-0752
分子名称: 4-bromanyl-2-(4~{H}-1,2,4-triazol-3-yl)aniline, GLYCEROL, Indoleamine 2,3-dioxygenase 1, ...
著者Roehrig, U.F, Reynaud, A, Pojer, F, Michielin, O, Zoete, V.
登録日2020-09-24
公開日2021-02-17
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.998 Å)
主引用文献Azole-Based Indoleamine 2,3-Dioxygenase 1 (IDO1) Inhibitors.
J.Med.Chem., 64, 2021
7Q45
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Crystal structure of RCC1-Like domain 2 of ubiquitin ligase HERC2 in complex with DXDKDED motif of Myelin transcription factor 1
分子名称: CITRIC ACID, E3 ubiquitin-protein ligase HERC2, Myelin transcription factor 1
著者Demenge, A, Howard, E, Cousido-Siah, A, Mitschler, A, Podjarny, A, McEwen, A.G, Trave, G.
登録日2021-10-29
公開日2022-11-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.09999585 Å)
主引用文献Crystal structure of RCC1-Like domain 2 of ubiquitin ligase HERC2 in complex with DXDKDED motif of Myelin transcription factor 1
To Be Published
7EC6
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Crystal structure of SdgB (complexed with peptides)
分子名称: ASP-SER-ASP, Glycosyl transferase, group 1 family protein
著者Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
登録日2021-03-11
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
7Q5C
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Crystal structure of OmpG in space group 96
分子名称: Outer membrane porin G, SODIUM ION, TETRAETHYLENE GLYCOL, ...
著者Nguyen, T.T.M, Khan, A.R, Barringer, R, McManus, J.J, Race, P.R.
登録日2021-11-03
公開日2022-11-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.717 Å)
主引用文献Experimental phase diagrams to optimise OmpG
To Be Published

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件を2024-08-21に公開中

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