PDB: 47120 件ウェブページステータス検索Chemie searchBIRD

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2M8W	Restrained CS-Rosetta Solution NMR Structure of Staphylococcus aureus protein SAV1430. Northeast Structural Genomics Target ZR18. Structure determination 分子名称: Uncharacterized protein 著者 Mao, B, Tejero, R.T, Aramini, J.M, Snyder, D.A, Montelione, G.T, Northeast Structural Genomics Consortium (NESG) 登録日 2013-05-29 公開日 2013-08-21 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 PDBStat: a universal restraint converter and restraint analysis software package for protein NMR. J.Biomol.Nmr, 56, 2013
2GLS	REFINED ATOMIC MODEL OF GLUTAMINE SYNTHETASE AT 3.5 ANGSTROMS RESOLUTION 分子名称: GLUTAMINE SYNTHETASE, MANGANESE (II) ION 著者 Eisenberg, D, Almassy, R.J, Yamashita, M.M. 登録日 1989-05-19 公開日 1989-10-15 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Refined atomic model of glutamine synthetase at 3.5 A resolution. J.Biol.Chem., 264, 1989
7KE0	HIV-1 Integrase catalytic core domain complexed with allosteric inhibitor STP03-0404 分子名称: (2S)-tert-butoxy{4-(4-chlorophenyl)-2,3,6-trimethyl-1-[(1-methyl-1H-pyrazol-4-yl)methyl]-1H-pyrrolo[2,3-b]pyridin-5-yl}acetic acid, Integrase 著者 Lindenberger, J.J, Kvaratskhelia, M. 登録日 2020-10-09 公開日 2021-09-22 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.19 Å) 主引用文献 A highly potent and safe pyrrolopyridine-based allosteric HIV-1 integrase inhibitor targeting host LEDGF/p75-integrase interaction site. Plos Pathog., 17, 2021
7ARQ	Cryo EM of 3D DNA origami 16 helix bundle 分子名称: SCAFFOLD STRAND, STAPLE STRAND 著者 Feigl, E, Kube, M, Kohler, F. 登録日 2020-10-26 公開日 2020-11-18 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (10 Å) 主引用文献 Revealing the structures of megadalton-scale DNA complexes with nucleotide resolution. Nat Commun, 11, 2020
7SZ0	Cryo-EM structure of the extracellular module of the full-length EGFR L834R bound to EGF. "tips-juxtaposed" conformation 分子名称: Epidermal growth factor, Epidermal growth factor receptor 著者 Huang, Y, Ognjenovic, J, Karandur, D, Miller, K, Merk, A, Subramaniam, S, Kuriyan, J. 登録日 2021-11-25 公開日 2021-12-22 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 A molecular mechanism for the generation of ligand-dependent differential outputs by the epidermal growth factor receptor. Elife, 10, 2021
7PEJ	Crystal structure of Triosephosphate Isomerase from Schizosaccharomyces pombe (SpTIM wt) 分子名称: ACETATE ION, PHOSPHATE ION, SULFATE ION, ... 著者 Romero-Romero, S, Garza-Ramos, G. 登録日 2021-08-10 公開日 2022-08-24 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.79 Å) 主引用文献 Crystal structure of Triosephosphate Isomerase from Schizosaccharomyces pombe (SpTIM wt) To Be Published
7T4X	AKT1 K+ channel from A. thaliana in MSP2N2 lipid nanodisc 分子名称: PHOSPHATIDYLETHANOLAMINE, POTASSIUM ION, Potassium channel AKT1 著者 Dickinson, M.S, Pourmal, S. 登録日 2021-12-10 公開日 2021-12-22 最終更新日 2022-10-26 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Symmetry Reduction in a Hyperpolarization-Activated Homotetrameric Ion Channel. Biochemistry, 61, 2022
2MEG	CHANGES IN CONFORMATIONAL STABILITY OF A SERIES OF MUTANT HUMAN LYSOZYMES AT CONSTANT POSITIONS. 分子名称: LYSOZYME, SODIUM ION 著者 Funahashi, J, Takano, K, Yamagata, Y, Yutani, K. 登録日 1998-05-02 公開日 1998-07-15 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Contribution of amino acid substitutions at two different interior positions to the conformational stability of human lysozyme Protein Eng., 12, 1999
7E83	CryoEM structure of the human Kv4.2-KChIP1 complex, intracellular region 分子名称: Kv channel-interacting protein 1, Potassium voltage-gated channel subfamily D member 2 著者 Kise, Y, Nureki, O. 登録日 2021-02-28 公開日 2021-10-13 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural basis of gating modulation of Kv4 channel complexes. Nature, 599, 2021
7PXI	X-ray structure of LPMO at 7.88x10^3 Gy 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Auxiliary activity 9, COPPER (II) ION 著者 Tandrup, T, Lo Leggio, L. 登録日 2021-10-08 公開日 2022-08-24 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.63 Å) 主引用文献 Changes in active-site geometry on X-ray photoreduction of a lytic polysaccharide monooxygenase active-site copper and saccharide binding. Iucrj, 9, 2022
7PG1	Crystal Structure of Unlinked NS2B-NS3 Protease from Zika Virus in Complex with Inhibitor MI-2221 分子名称: Inhibitor MI-2221, Serine protease NS3, Serine protease subunit NS2B 著者 Huber, S, Heine, A, Steinmetzer, T. 登録日 2021-08-12 公開日 2022-08-24 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Structure-Based Optimization and Characterization of Macrocyclic Zika Virus NS2B-NS3 Protease Inhibitors. J.Med.Chem., 65, 2022
7B53	Crystal structure of MurE from E.coli 分子名称: 1,2-ETHANEDIOL, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase 著者 Koekemoer, L, Steindel, M, Fairhead, M, Talon, R, Douangamath, A, Arrowsmith, C.H, Edwards, A.M, Bountra, C, von Delft, F, Krojer, T, Structural Genomics Consortium (SGC) 登録日 2020-12-03 公開日 2020-12-16 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Crystal structure of MurE from E.coli To Be Published
7EEA	Cyanophage Pam1 tailspike receptor-binding domain 分子名称: Short-tailed cyanophage tailspike receptor-binding domain 著者 Zhang, J.T, Jiang, Y.L, Zhou, C.Z. 登録日 2021-03-18 公開日 2021-10-20 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.671 Å) 主引用文献 Structure and assembly pattern of a freshwater short-tailed cyanophage Pam1. Structure, 30, 2022
7K9N	Co-crystal structure of alpha glucosidase with compound 2 分子名称: (1S,2S,3R,4S,5S)-1-(hydroxymethyl)-5-[(9-methoxynonyl)amino]cyclohexane-1,2,3,4-tetrol, 1,2-ETHANEDIOL, Alpha glucosidase 2 alpha neutral subunit, ... 著者 Karade, S.S, Mariuzza, R.A. 登録日 2020-09-29 公開日 2021-09-29 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.07 Å) 主引用文献 N-Substituted Valiolamine Derivatives as Potent Inhibitors of Endoplasmic Reticulum alpha-Glucosidases I and II with Antiviral Activity. J.Med.Chem., 64, 2021
7B81	Crystal structure of Azotobacter vinelandii L-rhamnose 1-dehydrogenase (NAD bound-form) 分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Short-chain dehydrogenase/reductase SDR 著者 Yoshiwara, K, Watanabe, Y, Watanabe, S. 登録日 2020-12-12 公開日 2021-02-03 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.092 Å) 主引用文献 Crystal structure of l-rhamnose 1-dehydrogenase involved in the nonphosphorylative pathway of l-rhamnose metabolism in bacteria. Febs Lett., 595, 2021
7EKQ	CrClpP-S2c 分子名称: ATP-dependent Clp protease ATP-binding subunit CLPT4, chloroplastic, ATP-dependent Clp protease proteolytic subunit, ... 著者 Wang, N, Wang, Y.F, Cong, Y, Liu, C.M. 登録日 2021-04-06 公開日 2021-10-20 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 The cryo-EM structure of the chloroplast ClpP complex. Nat.Plants, 7, 2021
7E84	CryoEM structure of human Kv4.2-KChIP1 complex 分子名称: Kv channel-interacting protein 1, Potassium voltage-gated channel subfamily D member 2 著者 Kise, Y, Nureki, O. 登録日 2021-02-28 公開日 2021-10-13 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural basis of gating modulation of Kv4 channel complexes. Nature, 599, 2021
7EFT	Crystal structure of cell shape-determining protein MreC 分子名称: CHLORIDE ION, Cell shape protein MreC 著者 Xu, Q, Xiao, Q.J, Sun, B. 登録日 2021-03-23 公開日 2021-10-20 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The crystal structure of MreC provides insights into polymer formation. Febs Open Bio, 12, 2022
7AV9	Crystal Structure of the second bromodomain of Pleckstrin homology domain interacting protein (PHIP) in space group C2 分子名称: 1,2-ETHANEDIOL, PH-interacting protein 著者 Krojer, T, Talon, R, Fairhead, M, Szykowska, A, Burgess-Brown, N.A, Brennan, P.E, Arrowsmith, C.H, Edwards, A.M, Bountra, C, von Delft, F. 登録日 2020-11-04 公開日 2021-01-13 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.23 Å) 主引用文献 Crystal Structure of the second bromodomain of Pleckstrin homology domain interacting protein (PHIP) in space group C2 To Be Published
7PFQ	Crystal Structure of Unlinked NS2B-NS3 Protease from Zika Virus in Complex with Inhibitor MI-2247 分子名称: Inhibitor MI-2247, Serine protease NS3, Serine protease subunit NS2B 著者 Huber, S, Heine, A, Steinmetzer, T. 登録日 2021-08-11 公開日 2022-08-24 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Structure-Based Optimization and Characterization of Macrocyclic Zika Virus NS2B-NS3 Protease Inhibitors. J.Med.Chem., 65, 2022
2ZWE	Crystal structure of the copper-bound tyrosinase in complex with a caddie protein from streptomyces castaneoglobisporus obtained by soaking the deoxy-form crystal in dioxygen-saturated solution for 40 minutes 分子名称: COPPER (II) ION, MelC, NITRATE ION, ... 著者 Matoba, Y, Sugiyama, M. 登録日 2008-12-03 公開日 2009-12-15 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.32 Å) 主引用文献 Crystallographic evidence of drastic movement of a copper ion toward the substrate tyrosine for starting hydroxylation reaction of tyrosinase To be Published
7AIG	HIV-1 REVERSE TRANSCRIPTASE COMPLEX WITH DNA AND L-GLUTAMATE TENOFOVIR 分子名称: DNA (5'-D(*CP*AP*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*GP*(MRG)P*CP*GP*CP*CP*(DDG))-3'), DNA (5'-D(P*GP*GP*TP*CP*GP*GP*CP*GP*CP*CP*CP*GP*AP*AP*CP*AP*GP*GP*GP*AP*CP*TP*G)-3'), Gag-Pol polyprotein, ... 著者 Gu, W, Martinez, S.E, Nguyen, H, Xu, H, Herdewijn, P, de Jonghe, S, Das, K. 登録日 2020-09-27 公開日 2021-01-13 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.95 Å) 主引用文献 Tenofovir-Amino Acid Conjugates Act as Polymerase Substrates-Implications for Avoiding Cellular Phosphorylation in the Discovery of Nucleotide Analogues. J.Med.Chem., 64, 2021
7E1V	Cryo-EM structure of apo hybrid respiratory supercomplex consisting of Mycobacterium tuberculosis complexIII and Mycobacterium smegmatis complexIV 分子名称: (2R)-2-(hexadecanoyloxy)-3-{[(S)-hydroxy{[(1R,2R,3R,4R,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propyl (9S)-9-methyloctadecanoate, (2R)-3-(((2-aminoethoxy)(hydroxy)phosphoryl)oxy)-2-(palmitoyloxy)propyl (E)-octadec-9-enoate, CARDIOLIPIN, ... 著者 Zhou, S, Wang, W, Gao, Y, Gong, H, Rao, Z. 登録日 2021-02-03 公開日 2021-10-13 最終更新日 2022-07-27 実験手法 ELECTRON MICROSCOPY (2.68 Å) 主引用文献 Structure of Mycobacterium tuberculosis cytochrome bcc in complex with Q203 and TB47, two anti-TB drug candidates. Elife, 10, 2021
7T9K	Cryo-EM structure of SARS-CoV-2 Omicron spike protein in complex with human ACE2 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, ... 著者 Zhu, X, Mannar, D, Saville, J.W, Srivastava, S.S, Berezuk, A.M, Tuttle, K.S, Subramaniam, S. 登録日 2021-12-19 公開日 2021-12-29 最終更新日 2022-05-18 実験手法 ELECTRON MICROSCOPY (2.45 Å) 主引用文献 SARS-CoV-2 Omicron variant: Antibody evasion and cryo-EM structure of spike protein-ACE2 complex. Science, 375, 2022
7SY5	Cryo-EM structure of the SARS-CoV-2 D614G,N501Y,E484K,K417N mutant spike protein ectodomain bound to human ACE2 ectodomain (global refinement) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, ... 著者 Zhu, X, Mannar, D, Saville, J.W, Srivastava, S.S, Berezuk, A.M, Zhou, S, Tuttle, K.S, Kim, A, Li, W, Dimitrov, D.S, Subramaniam, S. 登録日 2021-11-24 公開日 2021-12-29 最終更新日 2022-01-05 実験手法 ELECTRON MICROSCOPY (2.59 Å) 主引用文献 Structural analysis of receptor binding domain mutations in SARS-CoV-2 variants of concern that modulate ACE2 and antibody binding. Cell Rep, 37, 2021

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