Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6QYD
DownloadVisualize
BU of 6qyd by Molmil
Cryo-EM structure of the head in mature bacteriophage phi29
分子名称: Capsid fiber protein, Major capsid protein
著者Xu, J.W, Wang, D.H, Gui, M, Xiang, Y.
登録日2019-03-08
公開日2019-06-12
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural assembly of the tailed bacteriophage φ29.
Nat Commun, 10, 2019
6RDH
DownloadVisualize
BU of 6rdh by Molmil
CryoEM structure of Polytomella F-ATP synthase, Rotary substate 1A, composite map
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ASA-10: Polytomella F-ATP synthase associated subunit 10, ...
著者Murphy, B.J, Klusch, N, Yildiz, O, Kuhlbrandt, W.
登録日2019-04-12
公開日2019-07-03
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Rotary substates of mitochondrial ATP synthase reveal the basis of flexible F 1 -F o coupling.
Science, 364, 2019
6RDO
DownloadVisualize
BU of 6rdo by Molmil
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 1C, composite map
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ASA-10: Polytomella F-ATP synthase associated subunit 10, ...
著者Murphy, B.J, Klusch, N, Yildiz, O, Kuhlbrandt, W.
登録日2019-04-12
公開日2019-07-03
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Rotary substates of mitochondrial ATP synthase reveal the basis of flexible F 1 -F o coupling.
Science, 364, 2019
9INS
DownloadVisualize
BU of 9ins by Molmil
MONOVALENT CATION BINDING IN CUBIC INSULIN CRYSTALS
分子名称: INSULIN (CHAIN A), INSULIN (CHAIN B)
著者Badger, J, Dodson, G.G.
登録日1991-10-23
公開日1991-11-07
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Monovalent cation binding to cubic insulin crystals
Biophys.J., 61, 1992
6RDW
DownloadVisualize
BU of 6rdw by Molmil
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 1F, composite map
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ASA-10: Polytomella F-ATP synthase associated subunit 10, ...
著者Murphy, B.J, Klusch, N, Yildiz, O, Kuhlbrandt, W.
登録日2019-04-12
公開日2019-07-03
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Rotary substates of mitochondrial ATP synthase reveal the basis of flexible F 1 -F o coupling.
Science, 364, 2019
6RE5
DownloadVisualize
BU of 6re5 by Molmil
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 2C, composite map
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ASA-10: Polytomella F-ATP synthase associated subunit 10, ...
著者Murphy, B.J, Klusch, N, Yildiz, O, Kuhlbrandt, W.
登録日2019-04-12
公開日2019-07-03
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Rotary substates of mitochondrial ATP synthase reveal the basis of flexible F 1 -F o coupling.
Science, 364, 2019
6RE9
DownloadVisualize
BU of 6re9 by Molmil
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 2D, monomer-masked refinement
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ASA-10: Polytomella F-ATP synthase associated subunit 10, ...
著者Murphy, B.J, Klusch, N, Yildiz, O, Kuhlbrandt, W.
登録日2019-04-12
公開日2019-07-03
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Rotary substates of mitochondrial ATP synthase reveal the basis of flexible F 1 -F o coupling.
Science, 364, 2019
6CAS
DownloadVisualize
BU of 6cas by Molmil
Serial Femtosecond X-ray Crystal Structure of 30S ribosomal subunit from Thermus thermophilus in complex with N1MS
分子名称: 16S Ribosomal RNA rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者DeMirci, H.
登録日2018-01-31
公開日2018-07-25
最終更新日2018-10-24
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Aminoglycoside ribosome interactions reveal novel conformational states at ambient temperature.
Nucleic Acids Res., 46, 2018
6RET
DownloadVisualize
BU of 6ret by Molmil
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 3C, monomer-masked refinement
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ASA-10: Polytomella F-ATP synthase associated subunit 10, ...
著者Murphy, B.J, Klusch, N, Yildiz, O, Kuhlbrandt, W.
登録日2019-04-12
公開日2019-07-03
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Rotary substates of mitochondrial ATP synthase reveal the basis of flexible F 1 -F o coupling.
Science, 364, 2019
6QZ0
DownloadVisualize
BU of 6qz0 by Molmil
The cryo-EM structure of the head of the genome empited bacteriophage phi29
分子名称: Capsid fiber protein, Major capsid protein
著者Xu, J, Wang, D, Gui, M, Xiang, Y.
登録日2019-03-10
公開日2019-06-12
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural assembly of the tailed bacteriophage φ29.
Nat Commun, 10, 2019
6GSK
DownloadVisualize
BU of 6gsk by Molmil
Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNAThr in the A-site
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Rozov, A, Yusupov, M, Yusupova, G.
登録日2018-06-14
公開日2018-07-04
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.36 Å)
主引用文献Tautomeric G•U pairs within the molecular ribosomal grip and fidelity of decoding in bacteria.
Nucleic Acids Res., 46, 2018
2NMU
DownloadVisualize
BU of 2nmu by Molmil
Crystal structure of the hypothetical protein from Salmonella typhimurium LT2. Northeast Structural Genomics Consortium target StR127.
分子名称: Putative DNA-binding protein
著者Kuzin, A.P, Abashidze, M, Seetharaman, J, Wang, H, Nwosu, C, Cunningham, K, Ma, L.C, Xiao, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2006-10-23
公開日2006-11-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of the hypothetical protein from Salmonella typhimurium LT2. Northeast Structural Genomics Consortium target StR127.
To be Published
2NOB
DownloadVisualize
BU of 2nob by Molmil
Structure of catalytically inactive H270A human 8-oxoguanine glycosylase crosslinked to 8-oxoguanine DNA
分子名称: 5'-D(*G*CP*GP*TP*CP*CP*AP*(G42)P*GP*TP*CP*TP*AP*CP*C)-3', 5'-D(*T*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*C)-3', CALCIUM ION, ...
著者Radom, C.T, Banerjee, A, Verdine, G.L.
登録日2006-10-25
公開日2006-11-21
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural characterization of human 8-oxoguanine DNA glycosylase variants bearing active site mutations.
J.Biol.Chem., 282, 2007
6GSL
DownloadVisualize
BU of 6gsl by Molmil
Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAArg in the A-site
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Rozov, A, Yusupov, M, Yusupova, G.
登録日2018-06-14
公開日2018-07-04
最終更新日2018-09-05
実験手法X-RAY DIFFRACTION (3.16 Å)
主引用文献Tautomeric G•U pairs within the molecular ribosomal grip and fidelity of decoding in bacteria.
Nucleic Acids Res., 46, 2018
6H01
DownloadVisualize
BU of 6h01 by Molmil
Crystal structure of a domain-swapped dark-state sfGFP containing the unnatural amino acid ortho-nitrobenzyl-tyrosine (ONBY) at residue 66
分子名称: Green fluorescent protein
著者Kesgin-Schaefer, S, Tidow, H.
登録日2018-07-06
公開日2019-04-24
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.776 Å)
主引用文献Crystal structure of a domain-swapped photoactivatable sfGFP variant provides evidence for GFP folding pathway.
Febs J., 286, 2019
5J8K
DownloadVisualize
BU of 5j8k by Molmil
Architecture of supercomplex I-III2
分子名称: COMPLEX I 13KDA/NDUFS6, COMPLEX I 15KDA/NDUFS5, COMPLEX I 18KDA/NDUFS6, ...
著者Letts, J.A, Fiedorczuk, K, Sazanov, L.A.
登録日2016-04-08
公開日2016-09-21
最終更新日2019-12-11
実験手法ELECTRON MICROSCOPY (7.8 Å)
主引用文献The architecture of respiratory supercomplexes.
Nature, 537, 2016
6QM1
DownloadVisualize
BU of 6qm1 by Molmil
Solution NMR of synthetic analogues of nisin and mutacin ring A and ring B - Nisin Ring B (Lan8,11) analogue
分子名称: DAL-PRO-GLY-CYS-LYS
著者Dickman, R, Mitchell, S.A, Figueiredo, A, Hansen, D.F, Tabor, A.B.
登録日2019-02-01
公開日2019-09-11
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Molecular Recognition of Lipid II by Lantibiotics: Synthesis and Conformational Studies of Analogues of Nisin and Mutacin Rings A and B.
J.Org.Chem., 84, 2019
6GYB
DownloadVisualize
BU of 6gyb by Molmil
Cryo-EM structure of the bacteria-killing type IV secretion system core complex from Xanthomonas citri
分子名称: VirB10 protein, VirB7, VirB9 protein
著者Sgro, G.G, Costa, T.R.D, Farah, C.S, Waksman, G.
登録日2018-06-28
公開日2018-10-24
最終更新日2019-12-11
実験手法ELECTRON MICROSCOPY (3.28 Å)
主引用文献Cryo-EM structure of the bacteria-killing type IV secretion system core complex from Xanthomonas citri.
Nat Microbiol, 3, 2018
5J5B
DownloadVisualize
BU of 5j5b by Molmil
Structure of the WT E coli ribosome bound to tetracycline
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 1,4-DIAMINOBUTANE, ...
著者Cocozaki, A, Ferguson, A.
登録日2016-04-01
公開日2016-07-27
最終更新日2018-08-15
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Resistance mutations generate divergent antibiotic susceptibility profiles against translation inhibitors.
Proc.Natl.Acad.Sci.USA, 113, 2016
6CHT
DownloadVisualize
BU of 6cht by Molmil
HNF4alpha in complex with the corepressor EBP1 fragment
分子名称: Hepatocyte nuclear factor 4-alpha, LAURIC ACID, Proliferation-associated protein 2G4
著者Chi, Y.I, Singh, P, Lee, I.K.
登録日2018-02-22
公開日2019-02-27
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.174 Å)
主引用文献ErbB3-binding protein 1 (EBP1) represses HNF4 alpha-mediated transcription and insulin secretion in pancreatic beta-cells.
J.Biol.Chem., 294, 2019
6H23
DownloadVisualize
BU of 6h23 by Molmil
Crystal structure of the hClpP Y118A mutant with an activating small molecule
分子名称: 1,2-ETHANEDIOL, ATP-dependent Clp protease proteolytic subunit, mitochondrial, ...
著者Kick, L.M, Sieber, S.A, Schneider, S.
登録日2018-07-13
公開日2018-08-29
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (3.089 Å)
主引用文献Selective Activation of Human Caseinolytic Protease P (ClpP).
Angew. Chem. Int. Ed. Engl., 57, 2018
6RFQ
DownloadVisualize
BU of 6rfq by Molmil
Cryo-EM structure of a respiratory complex I assembly intermediate with NDUFAF2
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Acyl carrier protein ACPM1 of NADH:Ubiquinone Oxidoreductase (Complex I), ...
著者Parey, K, Vonck, J.
登録日2019-04-16
公開日2019-12-11
最終更新日2021-06-02
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献High-resolution cryo-EM structures of respiratory complex I: Mechanism, assembly, and disease.
Sci Adv, 5, 2019
6CAR
DownloadVisualize
BU of 6car by Molmil
Serial Femtosecond X-ray Crystal Structure of 30S ribosomal subunit from Thermus thermophilus in complex with Sisomicin
分子名称: (1S,2S,3R,4S,6R)-4,6-diamino-3-{[(2S,3R)-3-amino-6-(aminomethyl)-3,4-dihydro-2H-pyran-2-yl]oxy}-2-hydroxycyclohexyl 3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranoside, 16S Ribosomal RNA rRNA, 30S ribosomal protein S10, ...
著者DeMirci, H.
登録日2018-01-31
公開日2018-07-25
最終更新日2018-10-24
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Aminoglycoside ribosome interactions reveal novel conformational states at ambient temperature.
Nucleic Acids Res., 46, 2018
5L5E
DownloadVisualize
BU of 5l5e by Molmil
Yeast 20S proteasome with human beta5i (1-138) and human beta6 (97-111; 118-133) in complex with carfilzomib
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, MAGNESIUM ION, ...
著者Groll, M, Huber, E.M.
登録日2016-05-28
公開日2016-11-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献A humanized yeast proteasome identifies unique binding modes of inhibitors for the immunosubunit beta 5i.
EMBO J., 35, 2016
9AXF
DownloadVisualize
BU of 9axf by Molmil
Structure of human calcium-sensing receptor in complex with chimeric Gq (miniGisq) protein in detergent
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3-(2-chlorophenyl)-N-[(1R)-1-(3-methoxyphenyl)ethyl]propan-1-amine, ...
著者Zuo, H, Park, J, Frangaj, A, Ye, J, Lu, G, Manning, J.J, Asher, W.B, Lu, Z, Hu, G, Wang, L, Mendez, J, Eng, E, Zhang, Z, Lin, X, Grasucci, R, Hendrickson, W.A, Clarke, O.B, Javitch, J.A, Conigrave, A.D, Fan, Q.R.
登録日2024-03-06
公開日2024-04-17
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Promiscuous G-protein activation by the calcium-sensing receptor.
Nature, 629, 2024

224201

件を2024-08-28に公開中

PDB statisticsPDBj update infoContact PDBjnumon