1TAN
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![BU of 1tan by Molmil](/molmil-images/mine/1tan) | TANDEM DNA, NMR, MINIMIZED AVERAGE STRUCTURE | 分子名称: | DNA (5'-D(P*CP*AP*GP*C)-3'), DNA (5'-D(P*TP*CP*CP*A)-3'), DNA (5'-D(P*TP*GP*GP*AP*GP*CP*TP*G)-3') | 著者 | Denisov, A, Sandstrom, A, Maltseva, T, Pyshnyi, D, Ivanova, E, Zarytova, V, Chattopadhyaya, J. | 登録日 | 1997-06-17 | 公開日 | 1997-09-17 | 最終更新日 | 2024-05-22 | 実験手法 | SOLUTION NMR | 主引用文献 | The NMR structure of estrone (Es)-tethered tandem DNA duplex: [d(5'pCAGCp3')-Es] + [Es-d(5'pTCCA3')]: d(5'pTGGAGCTG3'). J.Biomol.Struct.Dyn., 15, 1997
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2O7M
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![BU of 2o7m by Molmil](/molmil-images/mine/2o7m) | The C-terminal loop of the homing endonuclease I-CreI is essential for DNA binding and cleavage. Identification of a novel site for specificity engineering in the I-CreI scaffold | 分子名称: | DNA endonuclease I-CreI | 著者 | Prieto, J, Redondo, P, Padro, D, Blanco, F.J, Paques, F, Montoya, G. | 登録日 | 2006-12-11 | 公開日 | 2007-10-23 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | The C-terminal loop of the homing endonuclease I-CreI is essential for site recognition, DNA binding and cleavage Nucleic Acids Res., 35, 2007
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1S37
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![BU of 1s37 by Molmil](/molmil-images/mine/1s37) | Accomodation of Mispair-Aligned N3T-Ethyl-N3T DNA Interstrand Crosslink | 分子名称: | DNA (5'-D(*CP*GP*AP*AP*AP*(TTM)P*TP*TP*TP*CP*G)-3'), DNA (5'-D(*CP*GP*AP*AP*AP*TP*TP*TP*TP*CP*G)-3') | 著者 | da Silva, M.W, Noronha, A.M, Noll, D.M, Miller, P.S, Colvin, O.M, Gamcsik, M.P. | 登録日 | 2004-01-12 | 公開日 | 2005-01-25 | 最終更新日 | 2024-05-01 | 実験手法 | SOLUTION NMR | 主引用文献 | Accommodation of mispair aligned N3T-ethyl-N3T DNA interstrand cross link. Biochemistry, 43, 2004
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1T6L
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![BU of 1t6l by Molmil](/molmil-images/mine/1t6l) | Crystal Structure of the Human Cytomegalovirus DNA Polymerase Subunit, UL44 | 分子名称: | DNA polymerase processivity factor | 著者 | Appleton, B.A, Loregian, A, Filman, D.J, Coen, D.M, Hogle, J.M. | 登録日 | 2004-05-06 | 公開日 | 2004-08-10 | 最終更新日 | 2024-02-14 | 実験手法 | X-RAY DIFFRACTION (1.85 Å) | 主引用文献 | The Cytomegalovirus DNA Polymerase Subunit UL44 Forms a C Clamp-Shaped Dimer. Mol.Cell, 15, 2004
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1RVH
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![BU of 1rvh by Molmil](/molmil-images/mine/1rvh) | SOLUTION STRUCTURE OF THE DNA DODECAMER GCAAAATTTTGC | 分子名称: | 5'-D(*GP*CP*AP*AP*AP*AP*TP*TP*TP*TP*GP*C)-3' | 著者 | Stefl, R, Wu, H, Ravindranathan, S, Sklenar, V, Feigon, J. | 登録日 | 2003-12-13 | 公開日 | 2004-02-10 | 最終更新日 | 2024-05-22 | 実験手法 | SOLUTION NMR | 主引用文献 | DNA A-tract bending in three dimensions: Solving the dA4T4 vs. dT4A4 conundrum. Proc.Natl.Acad.Sci.USA, 101, 2004
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1RVI
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![BU of 1rvi by Molmil](/molmil-images/mine/1rvi) | SOLUTION STRUCTURE OF THE DNA DODECAMER CGTTTTAAAACG | 分子名称: | 5'-D(*CP*GP*TP*TP*TP*TP*AP*AP*AP*AP*CP*G)-3' | 著者 | Stefl, R, Wu, H, Ravindranathan, S, Sklenar, V, Feigon, J. | 登録日 | 2003-12-13 | 公開日 | 2004-02-10 | 最終更新日 | 2024-05-22 | 実験手法 | SOLUTION NMR | 主引用文献 | DNA A-tract bending in three dimensions: Solving the dA4T4 vs. dT4A4 conundrum. Proc.Natl.Acad.Sci.USA, 101, 2004
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2KEQ
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![BU of 2keq by Molmil](/molmil-images/mine/2keq) | Solution structure of DnaE intein from Nostoc punctiforme | 分子名称: | DNA polymerase III alpha subunit, Nucleic acid binding OB-fold tRNA/helicase-type | 著者 | Oeemig, J.S, Aranko, A.S, Djupsj, J.B, Iwai, H. | 登録日 | 2009-02-02 | 公開日 | 2009-05-19 | 最終更新日 | 2024-05-29 | 実験手法 | SOLUTION NMR | 主引用文献 | Solution structure of DnaE intein from Nostoc punctiforme: structural basis for the design of a new split intein suitable for site-specific chemical modification. Febs Lett., 583, 2009
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225D
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![BU of 225d by Molmil](/molmil-images/mine/225d) | |
3RCZ
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![BU of 3rcz by Molmil](/molmil-images/mine/3rcz) | Rad60 SLD2 Ubc9 Complex | 分子名称: | DNA repair protein rad60, SUMO-conjugating enzyme ubc9 | 著者 | Perry, J.J.P, Arvai, A.S, Tainer, J.A. | 登録日 | 2011-03-31 | 公開日 | 2011-04-27 | 最終更新日 | 2023-09-13 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | DNA repair and global sumoylation are regulated by distinct Ubc9 noncovalent complexes. Mol.Cell.Biol., 31, 2011
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1D3R
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![BU of 1d3r by Molmil](/molmil-images/mine/1d3r) | CRYSTAL STRUCTURE OF TRIPLEX DNA | 分子名称: | DNA (5'-D(*CP*(BRU)P*CP*CP*(BRU)P*CP*CP*GP*CP*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*GP*CP*GP*GP*AP*G)-3') | 著者 | Rhee, S, Han, Z.-J, Liu, K, Todd Miles, H.T, Davies, D.R. | 登録日 | 1999-09-30 | 公開日 | 2000-01-01 | 最終更新日 | 2024-02-07 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Structure of a triple helical DNA with a triplex-duplex junction. Biochemistry, 38, 1999
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1AUL
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![BU of 1aul by Molmil](/molmil-images/mine/1aul) | SOLUTION STRUCTURE OF A HIGHLY STABLE DNA DUPLEX CONJUGATED TO A MINOR GROOVE BINDER, NMR, MINIMIZED AVERAGE STRUCTURE | 分子名称: | DNA (5'-D(*CP*AP*GP*AP*TP*AP*AP*TP*CP*A)-3'), DNA (5'-D(P*THXP*GP*AP*TP*TP*AP*TP*CP*TP*G)-3') | 著者 | Kumar, S, Reed, M.W, Gamper Junior, H.B, Gorn, V.V, Lukhtanov, E.A, Foti, M, West, J, Meyer Junior, R.B, Schweitzer, B.I. | 登録日 | 1997-08-29 | 公開日 | 1997-12-24 | 最終更新日 | 2024-05-22 | 実験手法 | SOLUTION NMR | 主引用文献 | Solution structure of a highly stable DNA duplex conjugated to a minor groove binder. Nucleic Acids Res., 26, 1998
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2N8A
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![BU of 2n8a by Molmil](/molmil-images/mine/2n8a) | 1H, 13C and 15N chemical shift assignments and solution structure for PARP-1 F1F2 domains in complex with a DNA single-strand break | 分子名称: | DNA (45-MER), Poly [ADP-ribose] polymerase 1, ZINC ION | 著者 | Neuhaus, D, Eustermann, S, Yang, J, Wu, W. | 登録日 | 2015-10-08 | 公開日 | 2015-12-02 | 最終更新日 | 2024-05-01 | 実験手法 | SOLUTION NMR | 主引用文献 | Structural Basis of Detection and Signaling of DNA Single-Strand Breaks by Human PARP-1. Mol.Cell, 60, 2015
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1ESS
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![BU of 1ess by Molmil](/molmil-images/mine/1ess) | STEROID TETHERED DNA, NMR, MINIMIZED AVERAGE STRUCTURE | 分子名称: | DNA (5'-D(P*CP*AP*GP*C)-3'), DNA (5'-D(P*TP*CP*CP*A)-3'), DNA (5'-D(P*TP*GP*GP*AP*GP*CP*TP*G)-3'), ... | 著者 | Denisov, A, Sandstrom, A, Maltseva, T, Pyshnyi, D, Ivanova, E, Zarytova, V, Chattopadhyaya, J. | 登録日 | 1997-06-17 | 公開日 | 1997-09-17 | 最終更新日 | 2024-05-22 | 実験手法 | SOLUTION NMR | 主引用文献 | The NMR structure of estrone (Es)-tethered tandem DNA duplex: [d(5'pCAGCp3')-Es] + [Es-d(5'pTCCA3')]: d(5'pTGGAGCTG3'). J.Biomol.Struct.Dyn., 15, 1997
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1AT4
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![BU of 1at4 by Molmil](/molmil-images/mine/1at4) | |
2LWG
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![BU of 2lwg by Molmil](/molmil-images/mine/2lwg) | |
2LWH
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![BU of 2lwh by Molmil](/molmil-images/mine/2lwh) | NMR Structure of the Self-Complementary 10 mer DNA Duplex 5'-GGATATATCC-3' in Complex with Netropsin | 分子名称: | DNA (5'-D(*GP*GP*AP*TP*AP*TP*AP*TP*CP*C)-3'), NETROPSIN | 著者 | Rettig, M, Germann, M.W, Wilson, W, Wang, S. | 登録日 | 2012-07-31 | 公開日 | 2013-01-23 | 最終更新日 | 2024-05-01 | 実験手法 | SOLUTION NMR | 主引用文献 | Molecular basis for sequence-dependent induced DNA bending. Chembiochem, 14, 2013
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1EMQ
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![BU of 1emq by Molmil](/molmil-images/mine/1emq) | |
1D20
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![BU of 1d20 by Molmil](/molmil-images/mine/1d20) | SOLUTION STRUCTURE OF PHAGE LAMBDA HALF-OPERATOR DNA | 分子名称: | DNA (5'-D(*CP*GP*GP*TP*GP*AP*TP*AP*GP*A)-3'), DNA (5'-D(*TP*CP*TP*AP*TP*CP*AP*CP*CP*G)-3') | 著者 | Baleja, J.D, Sykes, B.D. | 登録日 | 1990-08-01 | 公開日 | 1991-07-15 | 最終更新日 | 2024-05-22 | 実験手法 | SOLUTION NMR | 主引用文献 | Solution structure of phage lambda half-operator DNA by use of NMR, restrained molecular dynamics, and NOE-based refinement. Biochemistry, 29, 1990
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1AO9
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![BU of 1ao9 by Molmil](/molmil-images/mine/1ao9) | |
1EZN
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![BU of 1ezn by Molmil](/molmil-images/mine/1ezn) | SOLUTION STRUCTURE OF A DNA THREE-WAY JUNCTION | 分子名称: | DNA THREE-WAY JUNCTION | 著者 | van Buuren, B.N.M, Overmars, F.J, Ippel, J.H, Altona, C, Wijmenga, S.S. | 登録日 | 2000-05-11 | 公開日 | 2001-04-21 | 最終更新日 | 2024-05-22 | 実験手法 | SOLUTION NMR | 主引用文献 | Solution structure of a DNA three-way junction containing two unpaired thymidine bases. Identification of sequence features that decide conformer selection. J.Mol.Biol., 304, 2000
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1F3S
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![BU of 1f3s by Molmil](/molmil-images/mine/1f3s) | Solution Structure of DNA Sequence GGGTTCAGG Forms GGGG Tetrade and G(C-A) Triad. | 分子名称: | DNA (5'-D(*GP*GP*GP*TP*TP*CP*AP*GP*G)-3') | 著者 | Kettani, A, Basu, G, Gorin, A, Majumdar, A, Skripkin, E, Patel, D.J. | 登録日 | 2000-06-06 | 公開日 | 2000-11-13 | 最終更新日 | 2024-05-22 | 実験手法 | SOLUTION NMR | 主引用文献 | A two-stranded template-based approach to G.(C-A) triad formation: designing novel structural elements into an existing DNA framework. J.Mol.Biol., 301, 2000
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1EXL
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![BU of 1exl by Molmil](/molmil-images/mine/1exl) | STRUCTURE OF AN 11-MER DNA DUPLEX CONTAINING THE CARBOCYCLIC NUCLEOTIDE ANALOG: 2'-DEOXYARISTEROMYCIN | 分子名称: | DNA (5'-D(*CP*AP*GP*TP*GP*(2AR)P*GP*TP*CP*AP*C)-3'), DNA (5'-D(*GP*TP*GP*AP*CP*TP*CP*AP*CP*TP*G)-3') | 著者 | Smirnov, S, Johnson, F, Marumoto, R, de los Santos, C. | 登録日 | 2000-05-03 | 公開日 | 2000-05-15 | 最終更新日 | 2024-05-01 | 実験手法 | SOLUTION NMR | 主引用文献 | Structure of an 11-mer DNA duplex containing the carbocyclic nucleotide analog: 2'-deoxyaristeromycin J.Biomol.Struct.Dyn., 17, 2000
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1BW7
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![BU of 1bw7 by Molmil](/molmil-images/mine/1bw7) | |
1BJH
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![BU of 1bjh by Molmil](/molmil-images/mine/1bjh) | HAIRPIN LOOPS CONSISTING OF SINGLE ADENINE RESIDUES CLOSED BY SHEARED A(DOT)A AND G(DOT)G PAIRS FORMED BY THE DNA TRIPLETS AAA AND GAG: SOLUTION STRUCTURE OF THE D(GTACAAAGTAC) HAIRPIN, NMR, 16 STRUCTURES | 分子名称: | DNA (5'-D(*GP*TP*AP*CP*AP*AP*AP*GP*TP*AP*C)-3') | 著者 | Chou, S.-H, Zhu, L, Gao, Z, Cheng, J.-W, Reid, B.R. | 登録日 | 1997-07-25 | 公開日 | 1997-12-03 | 最終更新日 | 2024-05-22 | 実験手法 | SOLUTION NMR | 主引用文献 | Hairpin loops consisting of single adenine residues closed by sheared A.A and G.G pairs formed by the DNA triplets AAA and GAG: solution structure of the d(GTACAAAGTAC) hairpin. J.Mol.Biol., 264, 1996
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2L5K
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![BU of 2l5k by Molmil](/molmil-images/mine/2l5k) | Solution structure of truncated 23-mer DNA MUC1 aptamer | 分子名称: | DNA (5'-R(*(N68)P*G)-D(*CP*AP*GP*TP*TP*GP*AP*TP*CP*CP*TP*TP*TP*GP*GP*AP*TP*AP*CP*CP*CP*TP*GP*GP*T)-3') | 著者 | Cognet, J, Baouendi, M, Hantz, E, Missailidis, S, Herve du Penhoat, C, Piotto, M. | 登録日 | 2010-11-02 | 公開日 | 2011-12-07 | 最終更新日 | 2024-05-01 | 実験手法 | SOLUTION NMR | 主引用文献 | Solution structure of a truncated anti-MUC1 DNA aptamer determined by mesoscale modeling and NMR. Febs J., 279, 2012
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