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3CVC
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Regulation of Protein Function: Crystal Packing Interfaces and Conformational Dimerization
分子名称: COPPER (II) ION, MAGNESIUM ION, Plastocyanin
著者Crowley, P.B, Matias, P.M, Mi, H, Firbank, S.J, Banfield, M.J, Dennison, C.
登録日2008-04-18
公開日2008-07-08
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Regulation of protein function: crystal packing interfaces and conformational dimerization.
Biochemistry, 47, 2008
3J2N
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BU of 3j2n by Molmil
The X-ray structure of the gp15 hexamer and the model of the gp18 protein fitted into the cryo-EM reconstruction of the contracted T4 tail
分子名称: Tail connector protein Gp15, Tail sheath protein Gp18
著者Fokine, A, Zhang, Z, Kanamaru, S, Bowman, V.D, Aksyuk, A, Arisaka, F, Rao, V.B, Rossmann, M.G.
登録日2012-11-10
公開日2013-03-06
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (16 Å)
主引用文献The molecular architecture of the bacteriophage t4 neck.
J.Mol.Biol., 425, 2013
3JWQ
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BU of 3jwq by Molmil
Crystal structure of chimeric PDE5/PDE6 catalytic domain complexed with sildenafil
分子名称: 5-{2-ETHOXY-5-[(4-METHYLPIPERAZIN-1-YL)SULFONYL]PHENYL}-1-METHYL-3-PROPYL-1H,6H,7H-PYRAZOLO[4,3-D]PYRIMIDIN-7-ONE, MAGNESIUM ION, ZINC ION, ...
著者Barren, B, Gakhar, L, Muradov, H, Boyd, K.K, Ramaswamy, S, Artemyev, N.O.
登録日2009-09-18
公開日2009-10-13
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.87 Å)
主引用文献Structural basis of phosphodiesterase 6 inhibition by the C-terminal region of the gamma-subunit
Embo J., 28, 2009
3CVJ
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BU of 3cvj by Molmil
Crystal structure of a putative phosphoheptose isomerase (bh3325) from bacillus halodurans c-125 at 2.00 A resolution
分子名称: 1,2-ETHANEDIOL, ACETATE ION, MAGNESIUM ION, ...
著者Joint Center for Structural Genomics (JCSG)
登録日2008-04-18
公開日2008-05-06
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of putative phosphoheptose isomerase (NP_244191.1) from Bacillus halodurans at 2.00 A resolution
To be published
3J35
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BU of 3j35 by Molmil
Cryo-EM reconstruction of Dengue virus at 37 C
分子名称: envelope protein
著者Zhang, X.Z, Sheng, J, Plevka, P, Kuhn, R.J, Diamond, M.S, Rossmann, M.G.
登録日2013-02-24
公開日2013-04-10
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (35 Å)
主引用文献Dengue structure differs at the temperatures of its human and mosquito hosts.
Proc.Natl.Acad.Sci.USA, 110, 2013
3J3S
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BU of 3j3s by Molmil
Structural dynamics of the MecA-ClpC complex revealed by cryo-EM
分子名称: Adapter protein MecA 1, Negative regulator of genetic competence ClpC/MecB
著者Liu, J, Mei, Z, Li, N, Qi, Y, Xu, Y, Shi, Y, Wang, F, Lei, J, Gao, N.
登録日2013-04-18
公開日2013-05-15
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (11 Å)
主引用文献Structural dynamics of the MecA-ClpC complex: a type II AAA+ protein unfolding machine.
J.Biol.Chem., 288, 2013
3D6C
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BU of 3d6c by Molmil
Crystal structure of Staphylococcal nuclease variant PHS L38E at cryogenic temperature
分子名称: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
著者Harms, M.J, Schlessman, J.L, Sue, G.R, Garcia-Moreno, E.B.
登録日2008-05-19
公開日2008-11-04
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The pK(a) values of acidic and basic residues buried at the same internal location in a protein are governed by different factors.
J.Mol.Biol., 389, 2009
3J4J
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Model of full-length T. thermophilus Translation Initiation Factor 2 refined against its cryo-EM density from a 30S Initiation Complex map
分子名称: Translation initiation factor IF-2
著者Simonetti, A, Marzi, S, Billas, I.M.L, Tsai, A, Fabbretti, A, Myasnikov, A, Roblin, P, Vaiana, A.C, Hazemann, I, Eiler, D, Steitz, T.A, Puglisi, J.D, Gualerzi, C.O, Klaholz, B.P.
登録日2013-08-26
公開日2013-09-25
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (11.5 Å)
主引用文献Involvement of protein IF2 N domain in ribosomal subunit joining revealed from architecture and function of the full-length initiation factor.
Proc.Natl.Acad.Sci.USA, 110, 2013
3JX3
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BU of 3jx3 by Molmil
Structure of rat neuronal nitric oxide synthase D597N/M336V mutant heme domain in complex with N1-{(3'R,4'R)-4'-[(6"-amino-4"-methylpyridin-2"-yl)methyl]pyrrolidin-3'-yl}-N2-(3'-fluorophenethyl)ethane-1,2-diamine
分子名称: 5,6,7,8-TETRAHYDROBIOPTERIN, ACETATE ION, N-{(3R,4R)-4-[(6-amino-4-methylpyridin-2-yl)methyl]pyrrolidin-3-yl}-N'-[2-(3-fluorophenyl)ethyl]ethane-1,2-diamine, ...
著者Delker, S.L, Li, H, Poulos, T.L.
登録日2009-09-18
公開日2010-05-05
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Unexpected binding modes of nitric oxide synthase inhibitors effective in the prevention of a cerebral palsy phenotype in an animal model.
J.Am.Chem.Soc., 132, 2010
3JXQ
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X-Ray structure of r[CGCG(5-fluoro)CG]2
分子名称: MAGNESIUM ION, r[CGCG(5-fluoro)CG]2
著者Adamiak, D.A, Milecki, J, Adamiak, R.W, Rypniewski, W.
登録日2009-09-21
公開日2010-02-09
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献The hydration and unusual hydrogen bonding in the crystal structure of an RNA duplex containing alternating CG base pairs
New J.Chem., 34, 2010
3JXV
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Crystal Structure of the 3 FKBP domains of wheat FKBP73
分子名称: 70 kDa peptidyl-prolyl isomerase
著者Dym, O, Breiman, A, Israel Structural Proteomics Center (ISPC)
登録日2009-09-21
公開日2010-06-16
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Crystal structure of the three FK506 binding protein domains of wheat FKBP73: evidence for a unique wFK73_2 domain.
J Struct Funct Genomics, 11, 2010
3J4R
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BU of 3j4r by Molmil
Pseudo-atomic model of the AKAP18-PKA Complex in a linear conformation derived from electron microscopy
分子名称: A-kinase anchor protein 18, cAMP-dependent protein kinase catalytic subunit alpha, cAMP-dependent protein kinase type II-alpha regulatory subunit
著者Reichow, S.L, Gonen, T.
登録日2013-09-25
公開日2013-11-13
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (35 Å)
主引用文献Intrinsic disorder within an AKAP-protein kinase A complex guides local substrate phosphorylation.
Elife, 2, 2013
3J63
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BU of 3j63 by Molmil
Unified assembly mechanism of ASC-dependent inflammasomes
分子名称: Apoptosis-associated speck-like protein containing a CARD
著者Lu, A, Magupalli, V.G, Ruan, J, Yin, Q, Atianand, M.K, Vos, M, Schroder, G.F, Fitzgerald, K.A, Wu, H, Egelman, E.H.
登録日2013-12-05
公開日2014-03-26
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Unified Polymerization Mechanism for the Assembly of ASC-Dependent Inflammasomes.
Cell(Cambridge,Mass.), 156, 2014
3D7A
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BU of 3d7a by Molmil
Crystal structure of DUF54 family protein PH1010 from hyperthermophilic archaea Pyrococcus horikoshii OT3
分子名称: UPF0201 protein PH1010
著者Shirokane, M, Miyazono, K.I, Sawano, Y, Tanokura, M.
登録日2008-05-20
公開日2008-12-09
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of the DUF54 family protein PH1010 from hyperthermophilic archaea Pyrococcus horikoshii OT3.
Proteins, 74, 2008
3J6K
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BU of 3j6k by Molmil
2.5A structure of lysozyme solved by MicroED
分子名称: Lysozyme C
著者Nannenga, B.L, Shi, D, Leslie, A.G.W, Gonen, T.
登録日2014-03-18
公開日2014-08-13
最終更新日2024-11-27
実験手法ELECTRON CRYSTALLOGRAPHY (2.5 Å)
主引用文献High-resolution structure determination by continuous-rotation data collection in MicroED.
Nat.Methods, 11, 2014
3J6L
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BU of 3j6l by Molmil
Kinetic and Structural Analysis of Coxsackievirus B3 Receptor Interactions and Formation of the A-particle
分子名称: Coxsackievirus and adenovirus receptor, SULFATE ION
著者Organtini, L.J, Makhov, A.M, Conway, J.F, Hafenstein, S, Carson, S.D.
登録日2014-03-19
公開日2014-04-09
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献Kinetic and structural analysis of coxsackievirus b3 receptor interactions and formation of the a-particle.
J.Virol., 88, 2014
3J6N
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Kinetic and Structural Analysis of Coxsackievirus B3 Receptor Interactions and Formation of the A-particle
分子名称: Coxsackie and adenovirus receptor
著者Organtini, L.J, Makhov, A.M, Conway, J.F, Hafenstein, S, Carson, S.D.
登録日2014-03-19
公開日2014-04-09
最終更新日2024-11-27
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献Kinetic and structural analysis of coxsackievirus b3 receptor interactions and formation of the a-particle.
J.Virol., 88, 2014
3J6S
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Cryo-EM structure of Dengue virus serotype 3 at 28 degrees C
分子名称: envelope protein, membrane protein
著者Fibriansah, G, Tan, J.L, Smith, S.A, de Alwis, R, Ng, T.-S, Kostyuchenko, V.A, Kukkaro, P, de Silva, A.M, Crowe Jr, J.E, Lok, S.-M.
登録日2014-03-24
公開日2015-03-04
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (6 Å)
主引用文献A highly potent human antibody neutralizes dengue virus serotype 3 by binding across three surface proteins.
Nat Commun, 6, 2015
3D0R
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Crystal structure of calG3 from Micromonospora echinospora determined in space group P2(1)
分子名称: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, Protein CalG3
著者Bitto, E, Bingman, C.A, Wesenberg, G.E, Phillips Jr, G.N.
登録日2008-05-02
公開日2008-06-24
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Biochemical and structural insights of the early glycosylation steps in calicheamicin biosynthesis.
Chem.Biol., 15, 2008
3D1C
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BU of 3d1c by Molmil
Crystal structure of Flavin-containing Putative Monooxygenase (NP_373108.1) from STAPHYLOCOCCUS AUREUS MU50 at 2.40 A resolution
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Flavin-containing Putative Monooxygenase, SULFATE ION, ...
著者Joint Center for Structural Genomics (JCSG)
登録日2008-05-05
公開日2008-05-20
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of a Baeyer-Villiger flavin-containing monooxygenase from Staphylococcus aureus MRSA strain MU50.
Proteins, 2014
3K0N
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Room temperature structure of CypA
分子名称: Cyclophilin A
著者Fraser, J.S, Alber, T.
登録日2009-09-24
公開日2009-12-08
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.391 Å)
主引用文献Hidden alternative structures of proline isomerase essential for catalysis.
Nature, 462, 2009
3K0Q
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Cryogenic structure of CypA mutant Ser99Thr (2)
分子名称: Cyclophilin A
著者Fraser, J.S, Alber, T.
登録日2009-09-24
公開日2009-12-08
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.317 Å)
主引用文献Hidden alternative structures of proline isomerase essential for catalysis.
Nature, 462, 2009
3CI0
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The Crystal Structure of the GspK-GspI-GspJ complex from enterotoxigenic Escherichia coli Type 2 Secretion System
分子名称: CALCIUM ION, CHLORIDE ION, Pseudopilin GspI, ...
著者Korotkov, K.V, Hol, W.G.J.
登録日2008-03-10
公開日2008-04-29
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of the GspK-GspI-GspJ complex from the enterotoxigenic Escherichia coli type 2 secretion system.
Nat.Struct.Mol.Biol., 15, 2008
3K18
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Tellurium modified DNA-8mer
分子名称: 5'-D(*GP*(UMS)P*GP*(TTI)P*AP*CP*AP*C)-3'
著者Sheng, J, Hassan, A.E.A, Zhang, W, Huang, Z.
登録日2009-09-25
公開日2010-10-06
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Synthesis and Structure Study of Oligonucleotides Derivatized with Tellurium Functionality
To be Published
3CIM
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Carboxysome shell protein, CcmK2 C-terminal deletion mutant
分子名称: Carbon dioxide-concentrating mechanism protein ccmK homolog 2, GLYCEROL, SULFATE ION
著者Tanaka, S, Sawaya, M.R, Yeates, T.O.
登録日2008-03-11
公開日2009-02-03
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Insights from multiple structures of the shell proteins from the beta-carboxysome.
Protein Sci., 18, 2009

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