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2GV3
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BU of 2gv3 by Molmil
Translocation of a tRNA with an extended anticodon through the ribosome
分子名称: 5'-R(*GP*GP*CP*CP*AP*GP*AP*CP*UP*CP*CP*CP*GP*AP*AP*UP*CP*UP*GP*GP*CP*C)-3'
著者Phelps, S.S, Gaudin, C, Yoshizawa, S, Benitez, C, Fourmy, D, Joseph, S.
登録日2006-05-02
公開日2006-08-08
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Translocation of a tRNA with an Extended Anticodon Through the Ribosome.
J.Mol.Biol., 360, 2006
2B0T
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BU of 2b0t by Molmil
Structure of Monomeric NADP Isocitrate dehydrogenase
分子名称: MAGNESIUM ION, NADP Isocitrate dehydrogenase
著者Imabayashi, F, Aich, S, Prasad, L, Delbaere, L.T.
登録日2005-09-14
公開日2006-01-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Substrate-free structure of a monomeric NADP isocitrate dehydrogenase: An open conformation phylogenetic relationship of isocitrate dehydrogenase.
Proteins, 63, 2006
2GZV
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BU of 2gzv by Molmil
The cystal structure of the PDZ domain of human PICK1
分子名称: PRKCA-binding protein
著者Debreczeni, J.E, Elkins, J.M, Yang, X, Berridge, G, Bray, J, Colebrook, S, Smee, C, Savitsky, P, Gileadi, O, Turnbull, A, von Delft, F, Doyle, D.A, Sundstrom, M, Arrowsmith, C, Weigelt, J, Edwards, A, Structural Genomics Consortium (SGC)
登録日2006-05-12
公開日2006-07-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.12 Å)
主引用文献Structure of PICK1 and other PDZ domains obtained with the help of self-binding C-terminal extensions.
Protein Sci., 16, 2007
5BUM
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BU of 5bum by Molmil
Crystal Structure of LysM domain from Equisetum arvense chitinase A
分子名称: Chitinase A, SULFATE ION
著者Kitaoku, Y, Numata, T, Ohnuma, T, Taira, T, Fukamizo, T.
登録日2015-06-04
公開日2016-06-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure, mechanism, and phylogeny of LysM-chitinase conjugates specifically found in fern plants.
Plant Sci., 321, 2022
2O24
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BU of 2o24 by Molmil
Spectroscopic and Structural Study of the Heterotropic Linkage between Halide and Proton Ion Binding to Gfp Proteins: E2(GFP)-Cl Complex
分子名称: CHLORIDE ION, Green fluorescent protein
著者Garau, G.
登録日2006-11-29
公開日2007-05-15
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Spectroscopic and Structural Study of Proton and Halide Ion Cooperative Binding to GFP.
Biophys.J., 93, 2007
2O29
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BU of 2o29 by Molmil
Spectroscopic and Structural Study of the Heterotropic Linkage between Halide and Proton Ion Binding to Gfp Proteins: E2(GFP)-BR Complex
分子名称: BROMIDE ION, Green fluorescent protein
著者Garau, G.
登録日2006-11-29
公開日2007-05-15
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Spectroscopic and Structural Study of Proton and Halide Ion Cooperative Binding to GFP.
Biophys.J., 93, 2007
2X4R
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BU of 2x4r by Molmil
Crystal structure of MHC CLass I HLA-A2.1 bound to Cytomegalovirus (CMV) pp65 epitope
分子名称: 65 KDA PHOSPHOPROTEIN, BETA-2-MICROGLOBULIN, GLYCEROL, ...
著者Celie, P.H.N, Toebes, M, Rodenko, B, Ovaa, H, Perrakis, A, Schumacher, T.N.M.
登録日2010-02-02
公開日2010-03-02
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Uv-Induced Ligand Exchange in Mhc Class I Protein Crystals.
J.Am.Chem.Soc., 131, 2009
2O4F
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BU of 2o4f by Molmil
Structure of a parallel-stranded guanine tetraplex crystallised with monovalent ions
分子名称: 5'-D(*TP*GP*GP*GP*GP*T)-3', LITHIUM ION, SODIUM ION
著者Creze, C, Rinaldi, B, Haser, R, Bouvet, P, Gouet, P.
登録日2006-12-04
公開日2007-05-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure of a d(TGGGGT) quadruplex crystallized in the presence of Li+ ions.
Acta Crystallogr.,Sect.D, 63, 2007
2O12
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BU of 2o12 by Molmil
Mycobacterium tuberculosis Chorismate synthase in complex with FMN
分子名称: ACETATE ION, Chorismate synthase, FLAVIN MONONUCLEOTIDE, ...
著者Bruning, M, Bartunik, H.D.
登録日2006-11-28
公開日2008-04-08
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Complexes of Chorismate synthase from M. tuberculosis
To be Published
2O4I
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BU of 2o4i by Molmil
Structure of TREX1 in complex with DNA
分子名称: 5'-D(*GP*CP*TP*AP*GP*GP*CP*AP*GP*GP*AP*AP*CP*CP*CP*CP*TP*CP*CP*TP*CP*CP*CP*CP*T)-3', Three prime repair exonuclease 1
著者Brucet, M, Macias, M.J, Fita, I, Celada, A.
登録日2006-12-04
公開日2007-03-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structure of the dimeric exonuclease TREX1 in complex with DNA displays a proline-rich binding site for WW Domains.
J.Biol.Chem., 282, 2007
2WQH
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BU of 2wqh by Molmil
Crystal structure of CTPR3Y3
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, ...
著者Krachler, A.M, Sharma, A, Kleanthous, C.
登録日2009-08-21
公開日2010-04-07
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Self-association of TPR domains: Lessons learned from a designed, consensus-based TPR oligomer.
Proteins, 78, 2010
5Y32
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BU of 5y32 by Molmil
Crystal structure of PTP delta Ig1-Ig2 in complex with IL1RAPL1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Yamagata, A, Fukai, S.
登録日2017-07-27
公開日2017-08-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.701 Å)
主引用文献Mechanisms of splicing-dependent trans-synaptic adhesion by PTP delta-IL1RAPL1/IL-1RAcP for synaptic differentiation.
Nat Commun, 6, 2015
6H91
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BU of 6h91 by Molmil
Phosphorylated beta-phosphoglucomutase from Lactococcus lactis in an open conformer to 2.4 A
分子名称: 1,2-ETHANEDIOL, ACETYLPHOSPHATE, Beta-phosphoglucomutase, ...
著者Robertson, A.J, Bisson, C, Waltho, J.P.
登録日2018-08-03
公開日2020-08-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Transition state of phospho-enzyme hydrolysis in beta-phosphoglucomutase
To Be Published
5B48
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BU of 5b48 by Molmil
2-Oxoacid:Ferredoxin Oxidoreductase 1 from Sulfolobus tokodai
分子名称: 2-[(2E)-3-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-4-methyl-2-(1-oxidanylpropylidene)-1,3-thiazol-5-yl]ethyl phosphono hydrogen phosphate, 2-oxoacid--ferredoxin oxidoreductase alpha subunit, 2-oxoacid--ferredoxin oxidoreductase beta subunit, ...
著者Yan, Z, Maruyama, A, Arakawa, T, Fushinobu, S, Wakagi, T.
登録日2016-04-01
公開日2016-09-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of archaeal 2-oxoacid:ferredoxin oxidoreductases from Sulfolobus tokodaii
Sci Rep, 6, 2016
2O2Q
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BU of 2o2q by Molmil
Crystal structure of the C-terminal domain of rat 10'formyltetrahydrofolate dehydrogenase in complex with NADP
分子名称: Formyltetrahydrofolate dehydrogenase, GLYCEROL, MAGNESIUM ION, ...
著者Tsybovsky, Y, Donato, H, Krupenko, N.I, Davies, C, Krupenko, S.A.
登録日2006-11-30
公開日2007-03-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of the carboxyl terminal domain of rat 10-formyltetrahydrofolate dehydrogenase: implications for the catalytic mechanism of aldehyde dehydrogenases.
Biochemistry, 46, 2007
6H90
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BU of 6h90 by Molmil
K145A variant of beta-phosphoglucomutase from Lactococcus lactis inhibited by beryllium trifluoride to 1.3 A.
分子名称: 1,2-ETHANEDIOL, BERYLLIUM TRIFLUORIDE ION, Beta-phosphoglucomutase, ...
著者Robertson, A.J, Bisson, C, Waltho, J.P.
登録日2018-08-03
公開日2020-08-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.31 Å)
主引用文献Transition state of phospho-enzyme hydrolysis in beta-phosphoglucomutase.
To Be Published
2Q7F
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BU of 2q7f by Molmil
Crystal structure of YrrB: a TPR protein with an unusual peptide-binding site
分子名称: YrrB protein
著者Oh, J, Han, D, Kim, K, Lim, H.
登録日2007-06-06
公開日2007-08-07
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Crystal structure of YrrB: A TPR protein with an unusual peptide-binding site
Biochem.Biophys.Res.Commun., 360, 2007
5YU6
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BU of 5yu6 by Molmil
CRYSTAL STRUCTURE OF EXPORTIN-5:RANGTP COMPLEX
分子名称: 13-mer peptide, Exportin-5, GTP-binding nuclear protein Ran, ...
著者Yamazawa, R, Jiko, C, Lee, S.J, Yamashita, E.
登録日2017-11-20
公開日2018-08-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.997 Å)
主引用文献Structural Basis for Selective Binding of Export Cargoes by Exportin-5
Structure, 26, 2018
5B6C
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BU of 5b6c by Molmil
Structural Details of Ufd1 binding to p97
分子名称: Peptide from Ubiquitin fusion degradation protein 1 homolog, Transitional endoplasmic reticulum ATPase
著者Le, L.T.M, Yang, J.K.
登録日2016-05-26
公開日2017-01-04
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural Details of Ufd1 Binding to p97 and Their Functional Implications in ER-Associated Degradation
PLoS ONE, 11, 2016
2Z2Z
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BU of 2z2z by Molmil
Crystal structure of unautoprocessed form of Tk-subtilisin soaked by 10mM CaCl2
分子名称: CALCIUM ION, Tk-subtilisin precursor
著者Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S.
登録日2007-05-29
公開日2007-12-04
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Four new crystal structures of Tk-subtilisin in unautoprocessed, autoprocessed and mature forms: insight into structural changes during maturation
J.Mol.Biol., 372, 2007
2PHO
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BU of 2pho by Molmil
Crystal structure of human arginase I complexed with thiosemicarbazide at 1.95 resolution
分子名称: Arginase-1, HYDRAZINECARBOTHIOAMIDE, MANGANESE (II) ION
著者Di Costanzo, L, Christianson, D.W.
登録日2007-04-11
公開日2007-05-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of human arginase I complexed with thiosemicarbazide reveals an unusual thiocarbonyl mu-sulfide ligand in the binuclear manganese cluster.
J.Am.Chem.Soc., 129, 2007
5BCA
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BU of 5bca by Molmil
BETA-AMYLASE FROM BACILLUS CEREUS VAR. MYCOIDES
分子名称: CALCIUM ION, PROTEIN (1,4-ALPHA-D-GLUCAN MALTOHYDROLASE.)
著者Oyama, T, Kusunoki, M, Kishimoto, Y, Takasaki, Y, Nitta, Y.
登録日1999-03-12
公開日2000-03-15
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of beta-amylase from Bacillus cereus var. mycoides at 2.2 A resolution.
J.Biochem.(Tokyo), 125, 1999
2X89
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BU of 2x89 by Molmil
Structure of the Beta2_microglobulin involved in amyloidogenesis
分子名称: ANTIBODY, BETA-2-MICROGLOBULIN
著者Domanska, K, Srinivasan, V, Vanderhaegen, S, Pardon, E, Marquez, J.A, Bellotti, V, Wyns, L, Steyaert, J.
登録日2010-03-07
公開日2011-01-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Atomic Structure of a Nanobody-Trapped Domain-Swapped Dimer of an Amyloidogenic {Beta}2-Microglobulin Variant.
Proc.Natl.Acad.Sci.USA, 108, 2011
5BRO
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BU of 5bro by Molmil
Crystal structure of modified HexB (modB)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-hexosaminidase subunit beta, FORMIC ACID, ...
著者Kitakaze, K, Maita, N, Itoh, K.
登録日2015-06-01
公開日2016-05-04
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Protease-resistant modified human beta-hexosaminidase B ameliorates symptoms in GM2 gangliosidosis model.
J.Clin.Invest., 126, 2016
6HCF
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BU of 6hcf by Molmil
Structure of the rabbit 80S ribosome stalled on globin mRNA at the stop codon
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S12, ...
著者Juszkiewicz, S, Chandrasekaran, V, Lin, Z, Kraatz, S, Ramakrishnan, V, Hegde, R.S.
登録日2018-08-14
公開日2018-10-17
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献ZNF598 Is a Quality Control Sensor of Collided Ribosomes.
Mol. Cell, 72, 2018

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件を2024-08-21に公開中

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