PDB: 42250 件ウェブページステータス検索Chemie searchBIRD

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3A26	Crystal structure of P. horikoshii TYW2 in complex with MeSAdo 分子名称: 5'-DEOXY-5'-METHYLTHIOADENOSINE, TETRAETHYLENE GLYCOL, Uncharacterized protein PH0793 著者 Umitsu, M, Nishimasu, H, Ishitani, R, Nureki, O. 登録日 2009-04-28 公開日 2009-09-15 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural basis of AdoMet-dependent aminocarboxypropyl transfer reaction catalyzed by tRNA-wybutosine synthesizing enzyme, TYW2 Proc.Natl.Acad.Sci.USA, 106, 2009
6RQT	RNA Polymerase I-tWH-Rrn3-DNA 分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ... 著者 Mueller, C.W, Sadian, Y, Tafur, L. 登録日 2019-05-16 公開日 2019-12-11 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Molecular insight into RNA polymerase I promoter recognition and promoter melting. Nat Commun, 10, 2019
6J4C	Crystal structure of MarH, an epimerase for biosynthesis of Maremycins in Streptomyces, under 10 mM ZnSO4 分子名称: ACETIC ACID, Cupin superfamily protein, GLYCEROL, ... 著者 Hou, Y, Liu, B, Hu, K, Zhang, R. 登録日 2019-01-08 公開日 2020-01-15 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.58 Å) 主引用文献 Structural basis of the mechanism of beta-methyl epimerization by enzyme MarH. Org.Biomol.Chem., 17, 2019
6RUI	RNA Polymerase I Pre-initiation complex DNA opening intermediate 2 分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ... 著者 Mueller, C.W, Sadian, Y, Tafur, L. 登録日 2019-05-28 公開日 2019-12-11 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Molecular insight into RNA polymerase I promoter recognition and promoter melting. Nat Commun, 10, 2019
6JAH	Crystal structure of ABC transporter alpha-glycoside-binding protein in complex with glucose 分子名称: (2S)-heptane-1,2,7-triol, 1,2-ETHANEDIOL, ABC transporter, ... 著者 Kanaujia, S.P, Chandravanshi, M, Gogoi, P. 登録日 2019-01-24 公開日 2019-10-30 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.63 Å) 主引用文献 Structural and thermodynamic correlation illuminates the selective transport mechanism of disaccharide alpha-glycosides through ABC transporter. Febs J., 287, 2020
6JBB	Crystal structure of ABC transporter alpha-glycoside-binding mutant protein W287A in complex with sucrose 分子名称: 1,2-ETHANEDIOL, ABC transporter, periplasmic substrate-binding protein, ... 著者 Kanaujia, S.P, Chandravanshi, M, Gogoi, P. 登録日 2019-01-25 公開日 2019-10-30 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Structural and thermodynamic correlation illuminates the selective transport mechanism of disaccharide alpha-glycosides through ABC transporter. Febs J., 287, 2020
6S2N	Hen egg-white lysozyme by serial electron diffraction 分子名称: Lysozyme C 著者 Buecker, R, Mehrabi, P, Schulz, E.C, Hogan-Lamarre, P. 登録日 2019-06-21 公開日 2020-04-29 最終更新日 2024-10-23 実験手法 ELECTRON CRYSTALLOGRAPHY (1.8 Å) 主引用文献 Serial protein crystallography in an electron microscope. Nat Commun, 11, 2020
6J9Y	Crystal structure of ABC transporter alpha-glycoside-binding protein in complex with maltose 分子名称: 1,2-ETHANEDIOL, ABC transporter, periplasmic substrate-binding protein, ... 著者 Kanaujia, S.P, Chandravanshi, M, Gogoi, P. 登録日 2019-01-24 公開日 2019-10-30 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.63 Å) 主引用文献 Structural and thermodynamic correlation illuminates the selective transport mechanism of disaccharide alpha-glycosides through ABC transporter. Febs J., 287, 2020
6JAG	Crystal structure of ABC transporter alpha-glycoside-binding protein in complex with sucrose 分子名称: ABC transporter, periplasmic substrate-binding protein, CITRIC ACID, ... 著者 Kanaujia, S.P, Chandravanshi, M, Gogoi, P. 登録日 2019-01-24 公開日 2019-10-30 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Structural and thermodynamic correlation illuminates the selective transport mechanism of disaccharide alpha-glycosides through ABC transporter. Febs J., 287, 2020
6JB4	Crystal structure of ABC transporter alpha-glycoside-binding mutant protein W287A in complex with maltose 分子名称: 1,2-ETHANEDIOL, ABC transporter, periplasmic substrate-binding protein, ... 著者 Kanaujia, S.P, Chandravanshi, M, Gogoi, P. 登録日 2019-01-25 公開日 2019-10-30 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.63 Å) 主引用文献 Structural and thermodynamic correlation illuminates the selective transport mechanism of disaccharide alpha-glycosides through ABC transporter. Febs J., 287, 2020
6RKS	E. coli DNA Gyrase - DNA binding and cleavage domain in State 1 without TOPRIM insertion 分子名称: (3~{R})-3-[[4-(3,4-dihydro-2~{H}-pyrano[2,3-c]pyridin-6-ylmethylamino)piperidin-1-yl]methyl]-1,4,7-triazatricyclo[6.3.1.0^{4,12}]dodeca-6,8(12),9-triene-5,11-dione, DNA Strand 1, DNA Strand 2, ... 著者 Vanden Broeck, A, Lamour, V. 登録日 2019-04-30 公開日 2019-11-06 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Cryo-EM structure of the complete E. coli DNA gyrase nucleoprotein complex. Nat Commun, 10, 2019
6RLU	Trypanosoma brucei Seryl-tRNA Synthetase in Complex with 5'-O-(N-(L-seryl)-sulfamoyl)cytidine 分子名称: 5'-O-(N-(L-seryl)-sulfamoyl)cytidine, GLYCEROL, MALONATE ION, ... 著者 Pang, L, De Graef, S, Strelkov, S.V, Weeks, S.D. 登録日 2019-05-02 公開日 2020-01-08 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.88 Å) 主引用文献 Structural Insights into the Binding of Natural Pyrimidine-Based Inhibitors of Class II Aminoacyl-tRNA Synthetases. Acs Chem.Biol., 15, 2020
6JOE	Crystal structure of TrmD from Pseudomonas aeruginosa in complex with active-site inhibitor 分子名称: PHOSPHATE ION, S-ADENOSYLMETHIONINE, tRNA (guanine-N(1)-)-methyltransferase, ... 著者 Zhong, W, Pasunooti, K.K, Balamkundu, S, Wong, Y.W, Nah, Q, Liu, C.F, Lescar, J, Dedon, P.C. 登録日 2019-03-20 公開日 2019-09-04 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.21 Å) 主引用文献 Thienopyrimidinone Derivatives That Inhibit Bacterial tRNA (Guanine37-N1)-Methyltransferase (TrmD) by Restructuring the Active Site with a Tyrosine-Flipping Mechanism. J.Med.Chem., 62, 2019
6JHU	Crystal Structure Of Biotin Protein Ligase From Leishmania Major in complex with Biotinyl-5-AMP 分子名称: BIOTINYL-5-AMP, Biotin/lipoate protein ligase-like protein, SULFATE ION 著者 Rajak, M, Patel, A, Sundd, M. 登録日 2019-02-19 公開日 2020-04-08 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.97 Å) 主引用文献 Leishmania major biotin protein ligase forms a unique cross-handshake dimer Acta Crystallogr.,Sect.D, 77, 2021
6JPL	The X-ray structure of yeast tRNA methyltransferase Trm7-Trm734 in complex with S-adenosyl-L-methionine 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, S-ADENOSYLMETHIONINE, SULFATE ION, ... 著者 Hirata, A, Okada, K, Yoshii, K, Shiraisi, H, Saijo, S, Yonezawa, K, Shimizu, N, Hori, H. 登録日 2019-03-27 公開日 2019-10-02 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2.32 Å) 主引用文献 Structure of tRNA methyltransferase complex of Trm7 and Trm734 reveals a novel binding interface for tRNA recognition. Nucleic Acids Res., 47, 2019
6RVR	Atomic structure of the Epstein-Barr portal, structure I 分子名称: Portal protein 著者 Machon, C, Fabrega-Ferrer, M, Zhou, D, Cuervo, A, Carrascosa, J.L, Stuart, D.I, Coll, M. 登録日 2019-05-31 公開日 2019-09-18 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3.46 Å) 主引用文献 Atomic structure of the Epstein-Barr virus portal. Nat Commun, 10, 2019
6S6S	Structure of Azospirillum brasilense Glutamate Synthase in a4b4 oligomeric state. 分子名称: FE3-S4 CLUSTER, FLAVIN MONONUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, ... 著者 Chaves-Sanjuan, A, Bolognesi, M. 登録日 2019-07-03 公開日 2019-09-11 最終更新日 2025-07-09 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Cryo-EM Structures of Azospirillum brasilense Glutamate Synthase in Its Oligomeric Assemblies. J.Mol.Biol., 431, 2019
6RNW	The crystal structure of Thermosynechococcus elongatus protochlorophyllide oxidoreductase (POR) in complex with NADP. 分子名称: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, NADPH-protochlorophyllide oxidoreductase 著者 Levy, C.W. 登録日 2019-05-09 公開日 2019-10-30 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.92 Å) 主引用文献 Structural basis for enzymatic photocatalysis in chlorophyll biosynthesis. Nature, 574, 2019
6RPR	LEM domain of Emerin mutant T43I in complex with BAF dimer and the Igfold of the lamin A/C 分子名称: LEM domain of emerin mutant T43I, Prelamin-A/C, SULFATE ION, ... 著者 Essawy, N, Samson, C. 登録日 2019-05-14 公開日 2020-03-04 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.26 Å) 主引用文献 An Emerin LEM-Domain Mutation Impairs Cell Response to Mechanical Stress. Cells, 8, 2019
6JOF	Crystal structure of TrmD from Mycobacterium tuberculosis in complex with active-site inhibitor 分子名称: tRNA (guanine-N(1)-)-methyltransferase, ~{N}-[[4-[(4-azanylpiperidin-1-yl)methyl]phenyl]methyl]-4-oxidanylidene-3~{H}-thieno[2,3-d]pyrimidine-5-carboxamide 著者 Zhong, W, Pasunooti, K.K, Balamkundu, S, Wong, Y.W, Nah, Q, Liu, C.F, Lescar, J, Dedon, P.C. 登録日 2019-03-20 公開日 2019-09-04 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Thienopyrimidinone Derivatives That Inhibit Bacterial tRNA (Guanine37-N1)-Methyltransferase (TrmD) by Restructuring the Active Site with a Tyrosine-Flipping Mechanism. J.Med.Chem., 62, 2019
3A25	Crystal structure of P. horikoshii TYW2 in complex with AdoMet 分子名称: S-ADENOSYLMETHIONINE, Uncharacterized protein PH0793 著者 Umitsu, M, Nishimasu, H, Ishitani, R, Nureki, O. 登録日 2009-04-28 公開日 2009-09-15 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural basis of AdoMet-dependent aminocarboxypropyl transfer reaction catalyzed by tRNA-wybutosine synthesizing enzyme, TYW2 Proc.Natl.Acad.Sci.USA, 106, 2009
6JIT	Complex structure of an imine reductase at 2.05 Angstrom resolution 分子名称: 1-(2-phenylethyl)-3,4-dihydroisoquinoline, 6-phosphogluconate dehydrogenase NAD-binding protein, CHLORIDE ION, ... 著者 Li, H, Wu, L, Zheng, G.W, Zhou, J.H. 登録日 2019-02-23 公開日 2020-02-26 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.052 Å) 主引用文献 Complex structure of an imine reductase at 2.05 Angstrom resolution To Be Published
6RIC	Structure of the core Vaccinia Virus DNA-dependent RNA polymerase complex 分子名称: DNA-dependent RNA polymerase subunit rpo132, DNA-dependent RNA polymerase subunit rpo147, DNA-dependent RNA polymerase subunit rpo18, ... 著者 Grimm, C, Hillen, H.S, Bedenk, K, Bartuli, J, Neyer, S, Zhang, Q, Huettenhofer, A, Erlacher, M, Dienemann, C, Schlosser, A, Urlaub, H, Boettcher, B, Szalay, A, Cramer, P, Fischer, U. 登録日 2019-04-23 公開日 2019-12-18 最終更新日 2024-10-16 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Structural Basis of Poxvirus Transcription: Transcribing and Capping Vaccinia Complexes. Cell, 179, 2019
6J9E	Cryo-EM structure of Xanthomonos oryzae transcription elongation complex with NusA and the bacteriophage protein P7 分子名称: 45L, DNA (29-MER), DNA-directed RNA polymerase subunit alpha, ... 著者 You, L.L, Zhang, Y. 登録日 2019-01-22 公開日 2019-07-17 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.41 Å) 主引用文献 Structural basis for transcription antitermination at bacterial intrinsic terminator. Nat Commun, 10, 2019
6JAL	Crystal structure of ABC transporter alpha-glycoside-binding mutant protein R356A in ligand free form 分子名称: 1,2-ETHANEDIOL, ABC transporter, periplasmic substrate-binding protein, ... 著者 Kanaujia, S.P, Chandravanshi, M, Gogoi, P. 登録日 2019-01-24 公開日 2019-10-30 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.56 Å) 主引用文献 Structural and thermodynamic correlation illuminates the selective transport mechanism of disaccharide alpha-glycosides through ABC transporter. Febs J., 287, 2020

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