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4RRQ
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K121M mutant of N-terminal editing domain of threonyl-tRNA synthetase from Pyrococcus abyssi with L-Ser3AA
分子名称: SERINE-3'-AMINOADENOSINE, Threonine--tRNA ligase
著者Hussain, T, Kamarthapu, V, Sankaranarayanan, R.
登録日2014-11-06
公開日2015-07-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Specificity and catalysis hardwired at the RNA-protein interface in a translational proofreading enzyme.
Nat Commun, 6, 2015
4Q37
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BU of 4q37 by Molmil
Crystal structure of the hypothetical protein TM0182 Thermotoga maritima, N-terminal domain.
分子名称: PLATINUM (II) ION, Radical SAM protein
著者Hocker, B, Farias-Rico, J.A.
登録日2014-04-11
公開日2014-07-16
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.19 Å)
主引用文献Evolutionary relationship of two ancient protein superfolds.
Nat.Chem.Biol., 10, 2014
1NPE
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BU of 1npe by Molmil
Crystal structure of Nidogen/Laminin Complex
分子名称: CADMIUM ION, Laminin gamma-1 chain, nidogen
著者Takagi, J, Yang, Y.T, Liu, J.-H, Wang, J.-H, Springer, T.A.
登録日2003-01-17
公開日2003-08-12
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Complex between nidogen and laminin fragments reveals a paradigmatic beta-propeller interface
Nature, 424, 2003
3QU9
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BU of 3qu9 by Molmil
Crystal structure of pyrophosphatase from bacteroides thetaiotaomicron, asp13asn mutant complexed with magnesium and tartrate
分子名称: CHLORIDE ION, GLYCEROL, INORGANIC PYROPHOSPHATASE, ...
著者Patskovsky, Y, Huang, H, Toro, R, Gerlt, J.A, Burley, S.K, Dunaway-Mariano, D, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC), Enzyme Function Initiative (EFI)
登録日2011-02-23
公開日2011-04-27
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Divergence of Structure and Function in the Haloacid Dehalogenase Enzyme Superfamily: Bacteroides thetaiotaomicron BT2127 Is an Inorganic Pyrophosphatase.
Biochemistry, 50, 2011
4RR7
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BU of 4rr7 by Molmil
N-terminal editing domain of threonyl-tRNA synthetase from Aeropyrum pernix with L-Ser3AA (snapshot 2)
分子名称: MAGNESIUM ION, Probable threonine--tRNA ligase 2, SERINE-3'-AMINOADENOSINE
著者Ahmad, S, Muthukumar, S, Yerabham, A.S.K, Kamarthapu, V, Sankaranarayanan, R.
登録日2014-11-06
公開日2015-07-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Specificity and catalysis hardwired at the RNA-protein interface in a translational proofreading enzyme.
Nat Commun, 6, 2015
4RRG
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BU of 4rrg by Molmil
Editing domain of threonyl-tRNA synthetase from Methanococcus jannaschii with L-Thr3AA
分子名称: 3'-deoxy-3'-(L-threonylamino)adenosine, Threonine--tRNA ligase
著者Ahmad, S, Yerabham, A.S.K, Kamarthapu, V, Sankaranarayanan, R.
登録日2014-11-06
公開日2015-07-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Specificity and catalysis hardwired at the RNA-protein interface in a translational proofreading enzyme.
Nat Commun, 6, 2015
2B3Q
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BU of 2b3q by Molmil
Crystal structure of a well-folded variant of green fluorescent protein
分子名称: MAGNESIUM ION, green fluorescent protein
著者Pedelacq, J.D, Cabantous, S, Tran, T.H, Terwilliger, T.C, Waldo, G.S.
登録日2005-09-20
公開日2005-11-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Engineering and characterization of a superfolder green fluorescent protein.
Nat.Biotechnol., 24, 2006
1GQE
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BU of 1gqe by Molmil
Polypeptide Chain Release Factor 2 (RF2) from Escherichia coli
分子名称: RELEASE FACTOR 2
著者Vestergaard, B, Kjeldgaard, M.
登録日2001-11-22
公開日2002-04-04
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Bacterial Polypeptide Release Factor Rf2 is Structurally Distinct from Eukaryotic Erf1.
Mol.Cell, 8, 2001
4RRK
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BU of 4rrk by Molmil
Y115A mutant of N-terminal editing domain of threonyl-tRNA synthetase from Aeropyrum pernix with L-Thr3AA
分子名称: 3'-deoxy-3'-(L-threonylamino)adenosine, MAGNESIUM ION, Probable threonine--tRNA ligase 2
著者Ahmad, S, Muthukumar, S, Sankaranarayanan, R.
登録日2014-11-06
公開日2015-07-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Specificity and catalysis hardwired at the RNA-protein interface in a translational proofreading enzyme.
Nat Commun, 6, 2015
4RR9
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BU of 4rr9 by Molmil
N-terminal editing domain of threonyl-tRNA synthetase from Aeropyrum pernix with L-Ser3AA (snapshot 4)
分子名称: MAGNESIUM ION, Probable threonine--tRNA ligase 2, SERINE-3'-AMINOADENOSINE
著者Ahmad, S, Muthukumar, S, Yerabham, A.S.K, Kamarthapu, V, Sankaranarayanan, R.
登録日2014-11-06
公開日2015-07-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Specificity and catalysis hardwired at the RNA-protein interface in a translational proofreading enzyme.
Nat Commun, 6, 2015
4RRL
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BU of 4rrl by Molmil
E129A mutant of N-terminal editing domain of threonyl-tRNA synthetase from Aeropyrum pernix with L-Ser3AA
分子名称: Probable threonine--tRNA ligase 2, SERINE-3'-AMINOADENOSINE
著者Ahmad, S, Yerabham, A.S.K, Sankaranarayanan, R.
登録日2014-11-06
公開日2015-07-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.965 Å)
主引用文献Specificity and catalysis hardwired at the RNA-protein interface in a translational proofreading enzyme.
Nat Commun, 6, 2015
4RRC
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BU of 4rrc by Molmil
N-terminal editing domain of threonyl-tRNA synthetase from Aeropyrum pernix with L-Thr3AA (snapshot 3)
分子名称: 3'-deoxy-3'-(L-threonylamino)adenosine, Probable threonine--tRNA ligase 2
著者Ahmad, S, Muthukumar, S, Yerabham, A.S.K, Kamarthapu, V, Sankaranarayanan, R.
登録日2014-11-06
公開日2015-07-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Specificity and catalysis hardwired at the RNA-protein interface in a translational proofreading enzyme.
Nat Commun, 6, 2015
5ZKL
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BU of 5zkl by Molmil
Crystal structure of Streptococcus pneumoniae SP_0782 (residues 7-79) in complex with single-stranded DNA dT12
分子名称: DNA (5'-D(*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), SP_0782
著者Lu, G, Li, S, Zhu, J, Yang, Y, Gong, P.
登録日2018-03-24
公開日2019-03-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.951 Å)
主引用文献Structural insight into the length-dependent binding of ssDNA by SP_0782 from Streptococcus pneumoniae, reveals a divergence in the DNA-binding interface of PC4-like proteins.
Nucleic Acids Res., 48, 2020
1YAI
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BU of 1yai by Molmil
X-RAY STRUCTURE OF A BACTERIAL COPPER,ZINC SUPEROXIDE DISMUTASE
分子名称: COPPER (II) ION, COPPER, ZINC SUPEROXIDE DISMUTASE, ...
著者Bourne, Y, Redford, S.M, Lo, T.P, Tainer, J.A, Getzoff, E.D.
登録日1996-02-03
公開日1997-08-20
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Novel dimeric interface and electrostatic recognition in bacterial Cu,Zn superoxide dismutase.
Proc.Natl.Acad.Sci.USA, 93, 1996
4RRD
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BU of 4rrd by Molmil
N-terminal editing domain of threonyl-tRNA synthetase from Aeropyrum pernix with L-Thr3AA (snapshot 4)
分子名称: 3'-deoxy-3'-(L-threonylamino)adenosine, MAGNESIUM ION, Probable threonine--tRNA ligase 2
著者Ahmad, S, Muthukumar, S, Yerabham, A.S.K, Kamarthapu, V, Sankaranarayanan, R.
登録日2014-11-06
公開日2015-07-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Specificity and catalysis hardwired at the RNA-protein interface in a translational proofreading enzyme.
Nat Commun, 6, 2015
4RRR
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BU of 4rrr by Molmil
K121M mutant of N-terminal editing domain of threonyl-tRNA synthetase from Pyrococcus abyssi with L-Thr3AA
分子名称: 3'-deoxy-3'-(L-threonylamino)adenosine, Threonine--tRNA ligase
著者Hussain, T, Kamarthapu, V, Sankaranarayanan, R.
登録日2014-11-06
公開日2015-07-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Specificity and catalysis hardwired at the RNA-protein interface in a translational proofreading enzyme.
Nat Commun, 6, 2015
2BC9
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BU of 2bc9 by Molmil
Crystal-structure of the N-terminal large GTPase Domain of human Guanylate Binding protein 1 (hGBP1) in complex with non-hydrolysable GTP analogue GppNHp
分子名称: Interferon-induced guanylate-binding protein 1, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
著者Ghosh, A, Praefcke, G.J.K, Renault, L, Wittinghofer, A, Herrmann, C.
登録日2005-10-19
公開日2006-03-07
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献How guanylate-binding proteins achieve assembly-stimulated processive cleavage of GTP to GMP.
Nature, 440, 2006
4RRI
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BU of 4rri by Molmil
K116M mutant of N-terminal editing domain of threonyl-tRNA synthetase from Aeropyrum pernix with L-Thr3AA
分子名称: 3'-deoxy-3'-(L-threonylamino)adenosine, MAGNESIUM ION, Probable threonine--tRNA ligase 2
著者Ahmad, S, Muthukumar, S, Sankaranarayanan, R.
登録日2014-11-06
公開日2015-07-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Specificity and catalysis hardwired at the RNA-protein interface in a translational proofreading enzyme.
Nat Commun, 6, 2015
4B6S
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BU of 4b6s by Molmil
Structure of Helicobacter pylori Type II Dehydroquinase inhibited by (2S)-2-Perfluorobenzyl-3-dehydroquinic acid
分子名称: (1R,2S,4S,5R)-2-(2,3,4,5,6-pentafluorophenyl)methyl-1,4,5-trihydroxy-3-oxocyclohexane-1-carboxylic acid, 3-DEHYDROQUINATE DEHYDRATASE, PHOSPHATE ION
著者Otero, J.M, Llamas-Saiz, A.L, Lence, E, Tizon, L, Peon, A, Prazeres, V.F.V, Lamb, H, Hawkins, A.R, Gonzalez-Bello, C, van Raaij, M.J.
登録日2012-08-14
公開日2012-12-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Mechanistic basis of the inhibition of type II dehydroquinase by (2S)- and (2R)-2-benzyl-3-dehydroquinic acids.
ACS Chem. Biol., 8, 2013
4RRF
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BU of 4rrf by Molmil
Editing domain of threonyl-tRNA synthetase from Methanococcus jannaschii with L-Ser3AA
分子名称: CHLORIDE ION, MAGNESIUM ION, SERINE-3'-AMINOADENOSINE, ...
著者Ahmad, S, Yerabham, A.S.K, Kamarthapu, V, Sankaranarayanan, R.
登録日2014-11-06
公開日2015-07-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Specificity and catalysis hardwired at the RNA-protein interface in a translational proofreading enzyme.
Nat Commun, 6, 2015
4RRA
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BU of 4rra by Molmil
N-terminal editing domain of threonyl-tRNA synthetase from Aeropyrum pernix with L-Thr3AA (snapshot 1)
分子名称: 3'-deoxy-3'-(L-threonylamino)adenosine, MAGNESIUM ION, Probable threonine--tRNA ligase 2
著者Ahmad, S, Muthukumar, S, Yerabham, A.S.K, Kamarthapu, V, Sankaranarayanan, R.
登録日2014-11-06
公開日2015-07-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Specificity and catalysis hardwired at the RNA-protein interface in a translational proofreading enzyme.
Nat Commun, 6, 2015
4RR8
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BU of 4rr8 by Molmil
N-terminal editing domain of threonyl-tRNA synthetase from Aeropyrum pernix with L-Ser3AA (snapshot 3)
分子名称: MAGNESIUM ION, Probable threonine--tRNA ligase 2, SERINE-3'-AMINOADENOSINE
著者Ahmad, S, Muthukumar, S, Yerabham, A.S.K, Kamarthapu, V, Sankaranarayanan, R.
登録日2014-11-06
公開日2015-07-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Specificity and catalysis hardwired at the RNA-protein interface in a translational proofreading enzyme.
Nat Commun, 6, 2015
4RRJ
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BU of 4rrj by Molmil
Y115A mutant of N-terminal editing domain of threonyl-tRNA synthetase from Aeropyrum pernix with L-Ser3AA
分子名称: Probable threonine--tRNA ligase 2, SERINE-3'-AMINOADENOSINE
著者Ahmad, S, Muthukumar, S, Sankaranarayanan, R.
登録日2014-11-06
公開日2015-07-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Specificity and catalysis hardwired at the RNA-protein interface in a translational proofreading enzyme.
Nat Commun, 6, 2015
3G80
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BU of 3g80 by Molmil
Nodamura virus protein b2, RNA-binding domain
分子名称: Protein B2
著者Korber, S, Shaik Syed Ali, P, Chen, J.C.
登録日2009-02-11
公開日2010-01-05
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of the RNA-Binding Domain of Nodamura Virus Protein B2, a Suppressor of RNA Interference.
Biochemistry, 48, 2009
1JY0
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BU of 1jy0 by Molmil
Human acidic fibroblast growth factor. 141 amino acid form with amino terminal His tag and Cys 117 replaced with Val (C117V).
分子名称: FORMIC ACID, acidic fibroblast growth factor
著者Brych, S.R, Blaber, M.
登録日2001-09-10
公開日2003-08-12
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Accommodation of a highly symmetric core within a symmetric protein superfold.
Protein Sci., 12, 2003

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