7DKO
| De novo design protein AM2M | 分子名称: | de novo designed protein AM2M | 著者 | Bin, H. | 登録日 | 2020-11-25 | 公開日 | 2021-12-08 | 最終更新日 | 2024-05-29 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | A backbone-centred energy function of neural networks for protein design. Nature, 602, 2022
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8FRE
| Designed loop protein RBL4 | 分子名称: | 1,2-ETHANEDIOL, RBL4 | 著者 | Jude, K.M, Jiang, H, Baker, D, Garcia, K.C. | 登録日 | 2023-01-06 | 公開日 | 2024-04-17 | 最終更新日 | 2024-06-26 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | De novo design of buttressed loops for sculpting protein functions. Nat.Chem.Biol., 2024
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8FRF
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7DGU
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7DKK
| De novo design protein XM2H | 分子名称: | De novo design protein XM2H | 著者 | Bin, H. | 登録日 | 2020-11-24 | 公開日 | 2021-12-08 | 最終更新日 | 2024-05-29 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | A backbone-centred energy function of neural networks for protein design. Nature, 602, 2022
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7DGY
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7RMX
| Structure of De Novo designed tunable symmetric protein pockets | 分子名称: | Tunable symmetric protein, D_3_212 | 著者 | Bera, A.K, Hicks, D.R, Kang, A, Sankaran, B, Baker, D. | 登録日 | 2021-07-28 | 公開日 | 2022-08-03 | 最終更新日 | 2024-04-03 | 実験手法 | X-RAY DIFFRACTION (1.65 Å) | 主引用文献 | De novo design of protein homodimers containing tunable symmetric protein pockets. Proc.Natl.Acad.Sci.USA, 119, 2022
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6CZH
| Structure of a redesigned beta barrel, mFAP0, bound to DFHBI | 分子名称: | (5Z)-5-(3,5-difluoro-4-hydroxybenzylidene)-2,3-dimethyl-3,5-dihydro-4H-imidazol-4-one, mFAP0 | 著者 | Doyle, L.A, Stoddard, B.L. | 登録日 | 2018-04-09 | 公開日 | 2018-09-19 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | De novo design of a fluorescence-activating beta-barrel. Nature, 561, 2018
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6CZI
| Structure of a redesigned beta barrel, mFAP1, bound to DFHBI | 分子名称: | (5Z)-5-(3,5-difluoro-4-hydroxybenzylidene)-2,3-dimethyl-3,5-dihydro-4H-imidazol-4-one, mFAP1 | 著者 | Doyle, L.A, Stoddard, B.L. | 登録日 | 2018-04-09 | 公開日 | 2018-09-19 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | De novo design of a fluorescence-activating beta-barrel. Nature, 561, 2018
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7UPQ
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7UPO
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7UPP
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7L33
| X-ray Structure of a Cu-Bound De Novo Designed Peptide Trimer | 分子名称: | COPPER (II) ION, Cu-3SCC | 著者 | Chakraborty, S, Wawrzak, Z, Prasad, P, Mitra, S, Prakash, D. | 登録日 | 2020-12-17 | 公開日 | 2021-08-11 | 最終更新日 | 2023-10-18 | 実験手法 | X-RAY DIFFRACTION (1.45 Å) | 主引用文献 | De Novo Design of a Self-Assembled Artificial Copper Peptide that Activates and Reduces Peroxide Acs Catalysis, 11, 2021
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7LMX
| A HIGHLY SPECIFIC INHIBITOR OF INTEGRIN ALPHA-V BETA-6 WITH A DISULFIDE | 分子名称: | Integrin inhibitor | 著者 | Dong, X, Bera, A.K, Roy, A, Shi, L, Springer, T.A, Baker, D. | 登録日 | 2021-02-06 | 公開日 | 2022-08-10 | 最終更新日 | 2024-04-03 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | De novo design of highly selective miniprotein inhibitors of integrins alpha v beta 6 and alpha v beta 8. Nat Commun, 14, 2023
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7LMV
| SPECIFIC INHIBITOR OF INTEGRIN ALPHA-V BETA-6 | 分子名称: | Integrin inhibitor | 著者 | Dong, X, Bera, A.K, Roy, A, Shi, L, Springer, T.A, Baker, D. | 登録日 | 2021-02-05 | 公開日 | 2022-08-10 | 最終更新日 | 2024-04-03 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | De novo design of highly selective miniprotein inhibitors of integrins alpha v beta 6 and alpha v beta 8. Nat Commun, 14, 2023
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6MSQ
| Crystal structure of pRO-2.3 | 分子名称: | pRO-2.3 | 著者 | Boyken, S.E, Sankaran, B, Bick, M.J, Baker, D. | 登録日 | 2018-10-17 | 公開日 | 2019-05-08 | 最終更新日 | 2024-04-03 | 実験手法 | X-RAY DIFFRACTION (1.28 Å) | 主引用文献 | De novo design of tunable, pH-driven conformational changes. Science, 364, 2019
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6MSR
| Crystal structure of pRO-2.5 | 分子名称: | pRO-2.5 | 著者 | Bick, M.J, Sankaran, B, Boyken, S.E, Baker, D. | 登録日 | 2018-10-17 | 公開日 | 2019-05-08 | 最終更新日 | 2024-04-03 | 実験手法 | X-RAY DIFFRACTION (1.55 Å) | 主引用文献 | De novo design of tunable, pH-driven conformational changes. Science, 364, 2019
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7QDK
| A trimeric de novo coiled-coil assembly: CC-TypeN-LaLd | 分子名称: | (4S)-2-METHYL-2,4-PENTANEDIOL, CC-TypeN-LaLd, GLYCEROL, ... | 著者 | Kumar, P, Paterson, N.G, Woolfson, D.N. | 登録日 | 2021-11-27 | 公開日 | 2022-04-27 | 最終更新日 | 2022-07-27 | 実験手法 | X-RAY DIFFRACTION (1.41 Å) | 主引用文献 | De novo design of discrete, stable 3 10 -helix peptide assemblies. Nature, 607, 2022
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7UDJ
| Crystal structure of designed helical repeat protein RPB_PEW3_R4 bound to PAWx4 peptide | 分子名称: | 4xPAW peptide, De novo designed helical repeat protein RPB_PEW3_R4 | 著者 | Redler, R.L, Chang, Y, Bhabha, G, Ekiert, D. | 登録日 | 2022-03-20 | 公開日 | 2023-03-22 | 最終更新日 | 2024-04-03 | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | 主引用文献 | De novo design of modular peptide-binding proteins by superhelical matching. Nature, 616, 2023
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7M0Q
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8TCG
| Integrin alpha-v beta-6 in complex with minibinder B6_BP_dslf | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Integrin alpha-V heavy chain, ... | 著者 | Campbell, M.G, Fernandez, A, Roy, A, Kraft, J, Baker, D. | 登録日 | 2023-06-30 | 公開日 | 2023-09-27 | 実験手法 | ELECTRON MICROSCOPY (3.4 Å) | 主引用文献 | De novo design of highly selective miniprotein inhibitors of integrins alpha v beta 6 and alpha v beta 8. Nat Commun, 14, 2023
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2KI0
| NMR Structure of a de novo designed beta alpha beta | 分子名称: | DS119 | 著者 | Liang, H, Chen, H, Fan, K, Wei, P, Guo, X, Jin, C, Zeng, C, Tang, C, Lai, L. | 登録日 | 2009-04-18 | 公開日 | 2009-10-20 | 最終更新日 | 2024-05-29 | 実験手法 | SOLUTION NMR | 主引用文献 | De novo design of a beta alpha beta motif. Angew.Chem.Int.Ed.Engl., 48, 2009
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8TCF
| Integrin alpha-v beta-8 in complex with minibinder B8_BP_dsulf | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... | 著者 | Campbell, M.G, Fernandez, A, Roy, A, Kraft, J, Baker, D. | 登録日 | 2023-06-30 | 公開日 | 2023-09-27 | 実験手法 | ELECTRON MICROSCOPY (2.9 Å) | 主引用文献 | De novo design of highly selective miniprotein inhibitors of integrins alpha v beta 6 and alpha v beta 8. Nat Commun, 14, 2023
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5G37
| MR structure of the binary mosquito larvicide BinAB at pH 5 | 分子名称: | 41.9 KDA INSECTICIDAL TOXIN, LARVICIDAL TOXIN 51 KDA PROTEIN | 著者 | Colletier, J.P, Sawaya, M.R, Gingery, M, Rodriguez, J.A, Cascio, D, Brewster, A.S, Michels-Clark, T, Boutet, S, Williams, G.J, Messerschmidt, M, DePonte, D.P, Sierra, R.G, Laksmono, H, Koglin, J.E, Hunter, M.S, W Park, H, Uervirojnangkoorn, M, Bideshi, D.L, Brunger, A.T, Federici, B.A, Sauter, N.K, Eisenberg, D.S. | 登録日 | 2016-04-24 | 公開日 | 2016-10-05 | 最終更新日 | 2024-01-10 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | De Novo Phasing with X-Ray Laser Reveals Mosquito Larvicide Binab Structure. Nature, 539, 2016
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6N80
| S. aureus ClpP bound to anti-4a | 分子名称: | ATP-dependent Clp protease proteolytic subunit, N-[(1R)-1-borono-3-methylbutyl]-N~2~-(2-chloro-4-methoxybenzene-1-carbonyl)-L-leucinamide | 著者 | Lee, R.E, Griffith, E.C. | 登録日 | 2018-11-28 | 公開日 | 2019-06-26 | 最終更新日 | 2019-12-18 | 実験手法 | X-RAY DIFFRACTION (1.96 Å) | 主引用文献 | De Novo Design of Boron-Based Peptidomimetics as Potent Inhibitors of Human ClpP in the Presence of Human ClpX. J.Med.Chem., 62, 2019
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