PDB: 47065 件ウェブページステータス検索Chemie searchBIRD

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5A8I	Crystal structure of the FHA domain of ArnA from Sulfolobus acidocaldarius 分子名称: ARNA, GLYCEROL, SULFATE ION 著者 Hoffmann, L, Anders, K, Reimann, J, Linne, U, Essen, L.-O, Albers, S.-V. 登録日 2015-07-16 公開日 2016-06-22 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Phosphorylation-Dependent Interaction between an Archaeal Von Willebrand and Fha Domain Recruits Arna-Arnb Complex to DNA for Repression of Motility To be Published
3FOH	Fitting of gp18M crystal structure into 3D cryo-EM reconstruction of bacteriophage T4 extended tail 分子名称: Tail sheath protein Gp18 著者 Aksyuk, A.A, Leiman, P.G, Kurochkina, L.P, Shneider, M.M, Kostyuchenko, V.A, Mesyanzhinov, V.V, Rossmann, M.G. 登録日 2008-12-30 公開日 2009-03-10 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (15 Å) 主引用文献 The tail sheath structure of bacteriophage T4: a molecular machine for infecting bacteria. Embo J., 28, 2009
4GM3	Crystal structure of human WD repeat domain 5 with compound MM-101 分子名称: MM-101, WD repeat-containing protein 5 著者 Karatas, H, Townsend, E.C, Chen, Y, Bernard, D, Cao, F, Liu, L, Lei, M, Dou, Y, Wang, S. 登録日 2012-08-15 公開日 2013-07-31 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (3.393 Å) 主引用文献 High-affinity, small-molecule peptidomimetic inhibitors of MLL1/WDR5 protein-protein interaction. J.Am.Chem.Soc., 135, 2013
7JVB	Crystal structure of the SARS-CoV-2 spike receptor-binding domain (RBD) with nanobody Nb20 分子名称: CACODYLATE ION, Nanobody Nb20, Spike protein S1 著者 Xiang, Y, Xiao, Z, Liu, H, Sang, Z, Schneidman-Duhovny, D, Zhang, C, Shi, Y. 登録日 2020-08-20 公開日 2020-12-02 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (3.287 Å) 主引用文献 Versatile and multivalent nanobodies efficiently neutralize SARS-CoV-2. Science, 370, 2020
3FJF	Crystal structure of C83T mutant of Human acidic fibroblast growth factor 分子名称: FORMIC ACID, Heparin-binding growth factor 1 著者 Blaber, M, Lee, J. 登録日 2008-12-14 公開日 2009-10-06 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural basis of conserved cysteine in the fibroblast growth factor family: evidence for a vestigial half-cystine. J.Mol.Biol., 393, 2009
7QSP	Permutated C-terminal lobe of the ribose binding protein from Thermotoga maritima 分子名称: 1,2-ETHANEDIOL, Ribose ABC transporter, periplasmic ribose-binding protein 著者 Shanmugaratnam, S, Michel, F, Hocker, B. 登録日 2022-01-14 公開日 2023-01-11 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.36 Å) 主引用文献 Structures of permuted halves of a modern ribose-binding protein. Acta Crystallogr D Struct Biol, 79, 2023
2BXG	Human serum albumin complexed with ibuprofen 分子名称: IBUPROFEN, SERUM ALBUMIN 著者 Ghuman, J, Zunszain, P.A, Petitpas, I, Bhattacharya, A.A, Curry, S. 登録日 2005-07-26 公開日 2005-09-22 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural Basis of the Drug-Binding Specificity of Human Serum Albumin. J.Mol.Biol., 353, 2005
2X86	AGME bound to ADP-B-mannose 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADP-L-GLYCERO-D-MANNO-HEPTOSE-6-EPIMERASE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ... 著者 Kowatz, T, Morrison, J.P, Tanner, M.E, Naismith, J.H. 登録日 2010-03-06 公開日 2010-03-16 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 The Crystal Structure of the Y140F Mutant of Adp-L-Glycero-D-Manno-Heptose 6-Epimerase Bound to Adp-Beta-D-Mannose Suggests a One Base Mechanism. Protein Sci., 19, 2010
7JVO	Importin alpha bound to the C-terminus of ACE2 分子名称: ARG-LYS-LYS-LYS-ASN-LYS-ALA, Importin subunit alpha-1 著者 Forwood, J.K, Cross, E.M, Tsimbalyuk, S. 登録日 2020-08-22 公開日 2020-10-14 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Targeting novel LSD1-dependent ACE2 demethylation domains inhibits SARS-CoV-2 replication. Cell Discov, 7, 2021
7QNS	Peptide VYEKKP in complex with human cathepsin V C25S mutant 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Cathepsin L2, ... 著者 Loboda, J, Sosnowski, P, Tusar, L, Vidmar, R, Vizovisek, M, Horvat, J, Kosec, G, Impens, F, Demol, H, Turk, B, Gevaert, K, Turk, D. 登録日 2021-12-22 公開日 2023-01-18 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Peptide VYEKKP in complex with human cathepsin V C25S mutant To Be Published
2WK2	Chitinase A from Serratia marcescens ATCC990 in complex with Chitotrio-thiazoline dithioamide. 分子名称: 2-deoxy-2-(ethanethioylamino)-beta-D-glucopyranose-(1-4)-2-deoxy-2-(ethanethioylamino)-beta-D-glucopyranose, 3AR,5R,6S,7R,7AR-5-HYDROXYMETHYL-2-METHYL-5,6,7,7A-TETRAHYDRO-3AH-PYRANO[3,2-D]THIAZOLE-6,7-DIOL, CHITINASE A, ... 著者 Taylor, E.J, Dennis, R.J, Macdonald, J.M, Tarling, C.A, Knapp, S, Withers, S.G, Davies, G.J. 登録日 2009-06-04 公開日 2010-03-16 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Chitinase Inhibition by Chitobiose and Chitotriose Thiazolines. Angew.Chem.Int.Ed.Engl., 49, 2010
1PHA	INHIBITOR-INDUCED CONFORMATIONAL CHANGE IN CYTOCHROME P450-CAM 分子名称: 1-(N-IMIDAZOLYL)-2-HYDROXY-2-(2,3-DICHLOROPHENYL)OCTANE, CYTOCHROME P450-CAM, PROTOPORPHYRIN IX CONTAINING FE 著者 Poulos, T.L. 登録日 1992-07-27 公開日 1993-10-31 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.63 Å) 主引用文献 Inhibitor-induced conformational change in cytochrome P-450CAM. Biochemistry, 32, 1993
4N1B	STRUCTURE OF KEAP1 KELCH DOMAIN WITH(1S,2R)-2-[(1S)-1-[(1-oxo-2,3-dihydro-1H-isoindol-2-Yl)methyl]-1,2,3,4-tetrahydroisoquinoline-2-Carbonyl]cyclohexane-1-carboxylic acid 分子名称: (1S,2R)-2-{[(1S)-1-[(1-oxo-1,3-dihydro-2H-isoindol-2-yl)methyl]-3,4-dihydroisoquinolin-2(1H)-yl]carbonyl}cyclohexanecarboxylic acid, ACETATE ION, Kelch-like ECH-associated protein 1 著者 Smith, M.A, Duclos, S, Beaumont, E, Kwong, J, Brooks, M, Barker, J, Jnoff, E, Brookfield, F, Courade, J.P, Barker, O, Fryatt, T, Albrecht, C, Bromidge, S. 登録日 2013-10-03 公開日 2014-02-19 最終更新日 2017-11-15 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 Binding Mode and Structure-Activity Relationships around Direct Inhibitors of the Nrf2-Keap1 Complex. Chemmedchem, 9, 2014
7K19	CryoEM structure of DNA-PK catalytic subunit complexed with DNA (Complex I) 分子名称: DNA (5'-D(*AP*AP*GP*CP*AP*GP*TP*AP*GP*AP*GP*CP*AP*TP*GP*C)-3'), DNA (5'-D(*GP*CP*AP*TP*GP*CP*TP*CP*TP*AP*CP*TP*GP*CP*TP*TP*CP*GP*AP*TP*AP*TP*CP*G)-3'), DNA-dependent protein kinase catalytic subunit 著者 Chen, X, Gellert, M, Yang, W. 登録日 2020-09-07 公開日 2021-01-06 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Structure of an activated DNA-PK and its implications for NHEJ. Mol.Cell, 81, 2021
2ZCH	Crystal structure of human prostate specific antigen complexed with an activating antibody 分子名称: 2-acetamido-2-deoxy-alpha-D-glucopyranose, CHLORIDE ION, PHOSPHATE ION, ... 著者 Menez, R, Stura, E, Jolivet-Reynaud, C. 登録日 2007-11-08 公開日 2008-01-29 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.83 Å) 主引用文献 Crystal structure of a ternary complex between human prostate-specific antigen, its substrate acyl intermediate and an activating antibody J.Mol.Biol., 376, 2008
4FUA	L-FUCULOSE-1-PHOSPHATE ALDOLASE COMPLEX WITH PGH 分子名称: BETA-MERCAPTOETHANOL, L-FUCULOSE-1-PHOSPHATE ALDOLASE, PHOSPHOGLYCOLOHYDROXAMIC ACID, ... 著者 Dreyer, M.K, Schulz, G.E. 登録日 1996-02-14 公開日 1996-10-14 最終更新日 2024-06-05 実験手法 X-RAY DIFFRACTION (2.43 Å) 主引用文献 Catalytic mechanism of the metal-dependent fuculose aldolase from Escherichia coli as derived from the structure. J.Mol.Biol., 259, 1996
2ED2	Solution Structure of RSGI RUH-069, a GTF2I domain in human cDNA 分子名称: General transcription factor II-I 著者 Doi-Katayama, Y, Hirota, H, Izumi, K, Hayashi, F, Yoshida, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2007-02-14 公開日 2007-08-14 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution Structure of RSGI RUH-069, a GTF2I domain in human cDNA To be published
2X56	Yersinia Pestis Plasminogen Activator Pla (Native) 分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, COAGULASE/FIBRINOLYSIN 著者 Eren, E, Murphy, M, Goguen, J, van den Berg, B. 登録日 2010-02-05 公開日 2010-07-28 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 An Active Site Water Network in the Plasminogen Activator Pla from Yersinia Pestis Structure, 18, 2010
8WP9	Small-heat shock protein from Methanocaldococcus jannaschii, Hsp16.5 分子名称: Small heat shock protein HSP16.5 著者 Lee, J, Ryu, B, Kim, T, Kim, K.K. 登録日 2023-10-09 公開日 2023-12-27 実験手法 ELECTRON MICROSCOPY (2.49 Å) 主引用文献 Cryo-EM structure of a 16.5-kDa small heat-shock protein from Methanocaldococcus jannaschii. Int.J.Biol.Macromol., 258, 2024
7JY9	Structure of a 9 base pair RecA-D loop complex 分子名称: DNA (27-MER), DNA (42-MER), MAGNESIUM ION, ... 著者 Pavletich, N.P. 登録日 2020-08-29 公開日 2020-11-04 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Mechanism of strand exchange from RecA-DNA synaptic and D-loop structures. Nature, 586, 2020
5A2G	An esterase from anaerobic Clostridium hathewayi can hydrolyze aliphatic aromatic polyesters 分子名称: CARBOXYLIC ESTER HYDROLASE, PHOSPHATE ION 著者 Hromic, A, Pavkov Keller, T, Steinkellner, G, Gruber, K, Perz, V, Baumschlager, A, Bleymaier, K, Zitzenbacher, S, Zankel, A, Mayrhofer, C, Sinkel, C, Kueper, U, Schlegel, K.A, Ribitsch, D, Guebitz, G.M. 登録日 2015-05-19 公開日 2016-02-24 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.899 Å) 主引用文献 An Esterase from Anaerobic Clostridium Hathewayi Can Hydrolyze Aliphatic-Aromatic Polyesters. Environ.Sci.Tech., 50, 2016
2ZT8	Crystal structure of human Glycyl-tRNA synthetase (GlyRS) in complex with Gly-AMP analog 分子名称: Glycyl-tRNA synthetase, [(2S,3R,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl (aminoacetyl)sulfamate 著者 Guo, R.T, Yang, X.L, Schimmel, P. 登録日 2008-09-19 公開日 2009-08-25 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (3.35 Å) 主引用文献 Crystal structures and biochemical analyses suggest unique mechanism and role for human GlyRS in Ap4A homeostasis To be Published
2ZTI	Structures of dimeric nonstandard nucleotide triphosphate pyrophosphatase from Pyrococcus horikoshii OT3: functional significance of interprotomer conformational changes 分子名称: MANGANESE (II) ION, NTPASE 著者 Lokanath, N.K, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2008-10-06 公開日 2008-10-21 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structures of dimeric nonstandard nucleotide triphosphate pyrophosphatase from Pyrococcus horikoshii OT3: functional significance of interprotomer conformational changes J.Mol.Biol., 375, 2008
4GPH	Structure of HmuO, heme oxygenase from Corynebacterium diphtheriae, in complex with the putative reaction intermediates between Fe3+-biliverdin and biliverdin (data set IV) 分子名称: ASCORBIC ACID, BILIVERDINE IX ALPHA, FE (III) ION, ... 著者 Unno, M, Ikeda-Saito, M. 登録日 2012-08-21 公開日 2013-08-21 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Crystal Structures of the Substrate-Free and the Product-Bound forms of HmuO, a Heme Oxygenase from Corynebacterium diphtheriae To be Published
1PJD	Structure and Topology of a Peptide Segment of the 6th Transmembrane Domain of the Saccharomyces cerevisiae alpha-Factor Receptor in Phospholipid Bilayers 分子名称: Pheromone alpha factor receptor 著者 Valentine, K.G, Liu, S.-F, Marassi, F.M, Veglia, G, Nevzorov, A.A, Opella, S.J, Ding, F.-X, Wang, S.-H, Arshava, B, Becker, J.M, Naider, F. 登録日 2003-06-02 公開日 2003-09-16 最終更新日 2024-05-22 実験手法 SOLID-STATE NMR 主引用文献 Structure and Topology of a Peptide Segment of the 6th Transmembrane Domain of the Saccharomyces cerevisiae alpha-Factor Receptor in Phospholipid Bilayers Biopolymers, 59, 2001

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