Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8IQ6
DownloadVisualize
BU of 8iq6 by Molmil
Cryo-EM structure of Latanoprost-bound prostaglandin-F2-alpha receptor-miniGq-Nb35 complex
分子名称: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, ...
著者Lv, X, Gao, K, Nie, J, Zhang, X, Zhang, S, Ren, Y, Li, Q, Huang, J, Liu, L, Zhang, X, Sun, X, Zhang, W, Liu, X.
登録日2023-03-15
公開日2024-01-31
最終更新日2024-11-06
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structures of human prostaglandin F 2 alpha receptor reveal the mechanism of ligand and G protein selectivity.
Nat Commun, 14, 2023
7LSK
DownloadVisualize
BU of 7lsk by Molmil
Structure of HIV-1 Reverse Transcriptase in complex with DNA, L-dTTP, and CA(2+) ion
分子名称: 1-{2-deoxy-5-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-beta-L-erythro-pentofuranosyl}-5-methylpyrimidine-2,4(1H,3H)-dione, AMMONIUM ION, CALCIUM ION, ...
著者Hoang, A, Ruiz, F.X, Arnold, E.
登録日2021-02-18
公開日2022-02-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis of HIV inhibition by L-nucleosides: Opportunities for drug development and repurposing.
Drug Discov Today, 27, 2022
8IR5
DownloadVisualize
BU of 8ir5 by Molmil
XFEL structure of cyanobacterial photosystem II under dark conditions
分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
著者Li, H, Suga, M, Shen, J.R.
登録日2023-03-17
公開日2024-01-17
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Oxygen-evolving photosystem II structures during S 1 -S 2 -S 3 transitions.
Nature, 626, 2024
8FQ7
DownloadVisualize
BU of 8fq7 by Molmil
Nanobody with WIW inserted in CDR3 loop to Inhibit Growth of Alzheimer's Tau fibrils
分子名称: GLYCEROL, Nanobody with WIW insert in CDR3 loop to target tau fibrils
著者Abskharon, R, Sawaya, M.R, Cascio, D.C, Eisenberg, D.S.
登録日2023-01-05
公開日2023-10-04
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structure-based design of nanobodies that inhibit seeding of Alzheimer's patient-extracted tau fibrils.
Proc.Natl.Acad.Sci.USA, 120, 2023
8IRE
DownloadVisualize
BU of 8ire by Molmil
XFEL structure of cyanobacterial photosystem II following two flashes (2F) with a 200-nanosecond delay
分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
著者Li, H, Suga, M, Shen, J.R.
登録日2023-03-17
公開日2024-01-17
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Oxygen-evolving photosystem II structures during S 1 -S 2 -S 3 transitions.
Nature, 626, 2024
9DNW
DownloadVisualize
BU of 9dnw by Molmil
Human ClC-3:noTMEM9
分子名称: (2R)-1-{[(S)-hydroxy{[(1S,2R,3R,4S,5S,6R)-2,4,6-trihydroxy-3,5-bis(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}-3-(octadecanoyloxy)propan-2-yl (5E,8E,11E,13E)-icosa-5,8,11,13-tetraenoate, CHLORIDE ION, CHOLESTEROL, ...
著者Son, Y, Schrecker, M, Hite, R.K.
登録日2024-09-18
公開日2025-04-02
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural basis of ClC-3 inhibition by TMEM9 and PI(3,5)P 2.
Biorxiv, 2025
9DNZ
DownloadVisualize
BU of 9dnz by Molmil
Human ClC-3:TMEM9, TMEM9 Protomer A: Complete, TMEM9 Protomer B: No LD, No CD
分子名称: (2R)-1-{[(S)-hydroxy{[(1S,2R,3R,4S,5S,6R)-2,4,6-trihydroxy-3,5-bis(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}-3-(octadecanoyloxy)propan-2-yl (5E,8E,11E,13E)-icosa-5,8,11,13-tetraenoate, CHLORIDE ION, CHOLESTEROL, ...
著者Son, Y, Schrecker, M, Hite, R.K.
登録日2024-09-18
公開日2025-04-02
実験手法ELECTRON MICROSCOPY (3.16 Å)
主引用文献Structural basis of ClC-3 inhibition by TMEM9 and PI(3,5)P 2.
Biorxiv, 2025
8IR9
DownloadVisualize
BU of 8ir9 by Molmil
XFEL structure of cyanobacterial photosystem II following one flash (1F) with a 30-microsecond delay
分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
著者Li, H, Suga, M, Shen, J.R.
登録日2023-03-17
公開日2024-01-17
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Oxygen-evolving photosystem II structures during S 1 -S 2 -S 3 transitions.
Nature, 626, 2024
9DVJ
DownloadVisualize
BU of 9dvj by Molmil
"Structure of the phosphate exporter XPR1/SLC53A1
分子名称: 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CHOLESTEROL, PHOSPHATE ION, ...
著者Zhu, Q, Diver, M.M.
登録日2024-10-08
公開日2025-04-02
実験手法ELECTRON MICROSCOPY (2.52 Å)
主引用文献Transport and InsP 8 gating mechanisms of the human inorganic phosphate exporter XPR1.
Nat Commun, 16, 2025
9DNX
DownloadVisualize
BU of 9dnx by Molmil
Human ClC-3:TMEM9, TMEM9 Protomer A and B: Complete
分子名称: (2R)-1-{[(S)-hydroxy{[(1S,2R,3R,4S,5S,6R)-2,4,6-trihydroxy-3,5-bis(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}-3-(octadecanoyloxy)propan-2-yl (5E,8E,11E,13E)-icosa-5,8,11,13-tetraenoate, CHLORIDE ION, CHOLESTEROL, ...
著者Son, Y, Schrecker, M, Hite, R.K.
登録日2024-09-18
公開日2025-04-02
実験手法ELECTRON MICROSCOPY (2.86 Å)
主引用文献Structural basis of ClC-3 inhibition by TMEM9 and PI(3,5)P 2.
Biorxiv, 2025
8V99
DownloadVisualize
BU of 8v99 by Molmil
GII.26 Leon 4509 norovirus protruding domain
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Capsid protein VP1, ...
著者Kher, G, Reese, T, Pancera, M, Hansman, G.
登録日2023-12-07
公開日2024-06-19
最終更新日2024-07-31
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Development of a broad-spectrum therapeutic Fc-nanobody for human noroviruses.
J.Virol., 98, 2024
8IRA
DownloadVisualize
BU of 8ira by Molmil
XFEL structure of cyanobacterial photosystem II following one flash (1F) with a 200-microsecond delay
分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
著者Li, H, Suga, M, Shen, J.R.
登録日2023-03-17
公開日2024-01-17
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Oxygen-evolving photosystem II structures during S 1 -S 2 -S 3 transitions.
Nature, 626, 2024
9DVM
DownloadVisualize
BU of 9dvm by Molmil
Structure of the phosphate exporter XPR1/SLC53A1, InsP8-bound, intracellular gate open/intracellular gate closed state
分子名称: (1R,3S,4R,5S,6R)-2,4,5,6-tetrakis(phosphonooxy)cyclohexane-1,3-diyl bis[trihydrogen (diphosphate)], 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CHOLESTEROL, ...
著者Zhu, Q, Diver, M.M.
登録日2024-10-08
公開日2025-04-02
実験手法ELECTRON MICROSCOPY (2.92 Å)
主引用文献Transport and InsP 8 gating mechanisms of the human inorganic phosphate exporter XPR1.
Nat Commun, 16, 2025
8V47
DownloadVisualize
BU of 8v47 by Molmil
CryoEM structure of AriA-AriB complex (Form II)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, AriA antitoxin, AriB
著者Deep, A, Corbett, K.D.
登録日2023-11-28
公開日2024-06-26
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (4.08 Å)
主引用文献Architecture and activation mechanism of the bacterial PARIS defence system.
Nature, 634, 2024
8IQ4
DownloadVisualize
BU of 8iq4 by Molmil
Cryo-EM structure of Carboprost-bound prostaglandin-F2-alpha receptor-miniGq-Nb35 complex
分子名称: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, ...
著者Lv, X, Gao, K, Nie, J, Zhang, X, Zhang, S, Ren, Y, Li, Q, Huang, J, Liu, L, Zhang, X, Sun, X, Zhang, W, Liu, X.
登録日2023-03-15
公開日2024-01-31
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Structures of human prostaglandin F 2 alpha receptor reveal the mechanism of ligand and G protein selectivity.
Nat Commun, 14, 2023
8V46
DownloadVisualize
BU of 8v46 by Molmil
CryoEM structure of AriA-AriB complex (Form I)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, AriA antitoxin, AriB, ...
著者Deep, A, Corbett, K.D.
登録日2023-11-28
公開日2024-06-26
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (3.09 Å)
主引用文献Architecture and activation mechanism of the bacterial PARIS defence system.
Nature, 634, 2024
8IRD
DownloadVisualize
BU of 8ird by Molmil
XFEL structure of cyanobacterial photosystem II following two flashes (2F) with a 20-nanosecond delay
分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
著者Li, H, Suga, M, Shen, J.R.
登録日2023-03-17
公開日2024-01-17
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Oxygen-evolving photosystem II structures during S 1 -S 2 -S 3 transitions.
Nature, 626, 2024
8V98
DownloadVisualize
BU of 8v98 by Molmil
GII.24 Loreto 1972 norovirus protruding domain
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Capsid protein VP1
著者Kher, G, Prewitt, A, Pancera, M, Hansman, G.
登録日2023-12-07
公開日2024-06-19
最終更新日2024-07-31
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Development of a broad-spectrum therapeutic Fc-nanobody for human noroviruses.
J.Virol., 98, 2024
9DVP
DownloadVisualize
BU of 9dvp by Molmil
Structure of the phosphate exporter XPR1/SLC53A1, Pi and InsP8-bound, intracellular gate closed state
分子名称: (1R,3S,4R,5S,6R)-2,4,5,6-tetrakis(phosphonooxy)cyclohexane-1,3-diyl bis[trihydrogen (diphosphate)], 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CHOLESTEROL, ...
著者Zhu, Q, Diver, M.M.
登録日2024-10-08
公開日2025-04-02
実験手法ELECTRON MICROSCOPY (2.81 Å)
主引用文献Transport and InsP 8 gating mechanisms of the human inorganic phosphate exporter XPR1.
Nat Commun, 16, 2025
7L8P
DownloadVisualize
BU of 7l8p by Molmil
Integrin alphaIIbbeta3 in complex with sibrafiban
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Lin, F.-Y, Springer, T.A.
登録日2020-12-31
公開日2022-06-15
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.34995365 Å)
主引用文献A general chemical principle for creating closure-stabilizing integrin inhibitors.
Cell, 185, 2022
8VRV
DownloadVisualize
BU of 8vrv by Molmil
GII.4c H2-tri HBGA norovirus protruding domain
分子名称: 1,2-ETHANEDIOL, Capsid protein, FORMIC ACID, ...
著者Kher, G, Prewitt, A, Pancera, M, Hansman, G.
登録日2024-01-22
公開日2024-06-19
最終更新日2025-01-01
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Development of a broad-spectrum therapeutic Fc-nanobody for human noroviruses.
J.Virol., 98, 2024
8AVN
DownloadVisualize
BU of 8avn by Molmil
Mutant of Superoxide dismutase SodFM1 from CPR Parcubacteria Wolfebacteria
分子名称: MANGANESE (II) ION, Superoxide dismutase
著者Basle, A, Barwinska-Sendra, A, Sendra, K.M, Waldron, K.
登録日2022-08-26
公開日2023-04-19
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献An ancient metalloenzyme evolves through metal preference modulation.
Nat Ecol Evol, 7, 2023
8V9A
DownloadVisualize
BU of 8v9a by Molmil
GII.NA1 Loreto 1257 norovirus protruding domain
分子名称: 1,2-ETHANEDIOL, Capsid protein VP1
著者Kher, G, Kim, I, Pancera, M, Hansman, G.
登録日2023-12-07
公開日2024-06-19
最終更新日2024-07-31
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Development of a broad-spectrum therapeutic Fc-nanobody for human noroviruses.
J.Virol., 98, 2024
9DVO
DownloadVisualize
BU of 9dvo by Molmil
Structure of the phosphate exporter XPR1/SLC53A1, Pi and InsP8-bound, intracellular gate open/intracellular gate closed state
分子名称: (1R,3S,4R,5S,6R)-2,4,5,6-tetrakis(phosphonooxy)cyclohexane-1,3-diyl bis[trihydrogen (diphosphate)], 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CHOLESTEROL, ...
著者Zhu, Q, Diver, M.M.
登録日2024-10-08
公開日2025-04-02
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Transport and InsP 8 gating mechanisms of the human inorganic phosphate exporter XPR1.
Nat Commun, 16, 2025
8IRC
DownloadVisualize
BU of 8irc by Molmil
XFEL structure of cyanobacterial photosystem II following one flash (1F) with a 5-millisecond delay (Single conformation)
分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
著者Li, H, Suga, M, Shen, J.R.
登録日2023-03-17
公開日2024-01-17
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Oxygen-evolving photosystem II structures during S 1 -S 2 -S 3 transitions.
Nature, 626, 2024

235666

件を2025-05-07に公開中

PDB statisticsPDBj update infoContact PDBjnumon