Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6RTA
DownloadVisualize
BU of 6rta by Molmil
Tetragonal lysozyme grown with 300g/L Ficoll
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION
著者Pereira, P.J.B, Ferreira, C, Martins, P.M.
登録日2019-05-22
公開日2019-06-26
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Protein crystals as a key for deciphering macromolecular crowding effects on biological reactions.
Phys Chem Chem Phys, 22, 2020
5AC2
DownloadVisualize
BU of 5ac2 by Molmil
human aldehyde dehydrogenase 1A1 with duocarmycin analog
分子名称: 1-[(1S)-1-methyl-5-oxidanyl-1,2-dihydrobenzo[e]indol-3-yl]hexan-1-one, RETINAL DEHYDROGENASE 1, YTTERBIUM (III) ION, ...
著者Koch, M.F, Harteis, S, Blank, I.D, Pestel, G, Tietze, L.F, Ochsenfeld, C, Schneider, S, Sieber, S.A.
登録日2015-08-11
公開日2015-08-26
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural, Biochemical, and Computational Studies Reveal the Mechanism of Selective Aldehyde Dehydrogenase 1A1 Inhibition by Cytotoxic Duocarmycin Analogues.
Angew.Chem.Int.Ed.Engl., 54, 2015
6RTO
DownloadVisualize
BU of 6rto by Molmil
Thioredoxin glutathione reductase from Schistosoma mansoni in complex with 1-[(dimethylamino)methyl]-2-naphthol at 4 hours of soaking
分子名称: 1-methylidenenaphthalen-2-one, FLAVIN-ADENINE DINUCLEOTIDE, TRIETHYLENE GLYCOL, ...
著者Angelucci, F, Silvestri, I, Fata, F, Williams, D.L.
登録日2019-05-24
公開日2020-01-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Ectopic suicide inhibition of thioredoxin glutathione reductase.
Free Radic Biol Med, 147, 2020
2MMZ
DownloadVisualize
BU of 2mmz by Molmil
Solution structure of the apo form of human glutaredoxin 5
分子名称: Glutaredoxin-related protein 5, mitochondrial
著者Banci, L, Brancaccio, D, Ciofi-Baffoni, S, Del Conte, R, Gadepalli, R, Mikolajczyk, M, Neri, S, Piccioli, M, Winkelmann, J.
登録日2014-03-25
公開日2014-04-16
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献[2Fe-2S] cluster transfer in iron-sulfur protein biogenesis.
Proc.Natl.Acad.Sci.USA, 111, 2014
4ZVW
DownloadVisualize
BU of 4zvw by Molmil
Structure of apo human ALDH7A1 in space group C2
分子名称: Alpha-aminoadipic semialdehyde dehydrogenase
著者Tanner, J.J.
登録日2015-05-18
公開日2015-08-26
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural Basis of Substrate Recognition by Aldehyde Dehydrogenase 7A1.
Biochemistry, 54, 2015
2Z8V
DownloadVisualize
BU of 2z8v by Molmil
Structure of an IgNAR-AMA1 complex
分子名称: Apical membrane antigen 1, New antigen receptor variable domain
著者Streltsov, V.A, Henderson, K.A, Batchelor, A.H, Coley, A.M, Nuttall, S.D.
登録日2007-09-11
公開日2007-11-27
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structure of an IgNAR-AMA1 Complex: Targeting a Conserved Hydrophobic Cleft Broadens Malarial Strain Recognition
Structure, 15, 2007
5AEC
DownloadVisualize
BU of 5aec by Molmil
Type II Baeyer-Villiger monooxygenase.The oxygenating constituent of 3,6-diketocamphane monooxygenase from CAM plasmid of Pseudomonas putida in complex with FMN.
分子名称: 3,6-DIKETOCAMPHANE 1,6 MONOOXYGENASE, CHLORIDE ION, GLYCEROL, ...
著者Isupov, M.N, Schroeder, E, Gibson, R.P, Beecher, J, Donadio, G, Saneei, V, Dcunha, S, McGhie, E.J, Sayer, C, Davenport, C.F, Lau, P.C, Hasegawa, Y, Iwaki, H, Kadow, M, Loschinski, K, Bornscheuer, U.T, Bourenkov, G, Littlechild, J.A.
登録日2015-08-28
公開日2015-09-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献The Oxygenating Constituent of 3,6-Diketocamphane Monooxygenase from the Cam Plasmid of Pseudomonas Putida: The First Crystal Structure of a Type II Baeyer-Villiger Monooxygenase.
Acta Crystallogr.,Sect.D, 71, 2015
5XJG
DownloadVisualize
BU of 5xjg by Molmil
Crystal structure of Vac8p bound to Nvj1p
分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, Nucleus-vacuole junction protein 1, ...
著者Jeong, H, Park, J, Jun, Y, Lee, C.
登録日2017-05-01
公開日2017-06-07
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Mechanistic insight into the nucleus-vacuole junction based on the Vac8p-Nvj1p crystal structure.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
2IN0
DownloadVisualize
BU of 2in0 by Molmil
crystal structure of Mtu recA intein splicing domain
分子名称: Endonuclease PI-MtuI
著者Van Roey, P.
登録日2006-10-05
公開日2007-05-01
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystallographic and mutational studies of Mycobacterium tuberculosis recA mini-inteins suggest a pivotal role for a highly conserved aspartate residue.
J.Mol.Biol., 367, 2007
6IQS
DownloadVisualize
BU of 6iqs by Molmil
Crystal structure of Prc with L245A and L340G mutations in complex with NlpI
分子名称: Lipoprotein NlpI, Tail-specific protease
著者Chuech, C.K, Chang, C.I.
登録日2018-11-08
公開日2019-07-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献Structural Basis for the Differential Regulatory Roles of the PDZ Domain in C-Terminal Processing Proteases.
Mbio, 10, 2019
2MM8
DownloadVisualize
BU of 2mm8 by Molmil
Structural and biochemical characterization of Jaburetox
分子名称: Urease
著者Dobrovolska, O, Lopez, F, Ciurli, S, Zambelli, B, Carlini, C.
登録日2014-03-12
公開日2015-01-28
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献1H, 13C, 15N resonance assignments of reduced Jaburetox
To be Published
6RY7
DownloadVisualize
BU of 6ry7 by Molmil
Crystal structure of Dfg5 from Chaetomium thermophilum in complex with laminaribiose
分子名称: CALCIUM ION, Mannan endo-1,6-alpha-mannosidase, TRIETHYLENE GLYCOL, ...
著者Essen, L.-O, Vogt, M.S.
登録日2019-06-10
公開日2020-08-12
最終更新日2020-09-16
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural base for the transfer of GPI-anchored glycoproteins into fungal cell walls.
Proc.Natl.Acad.Sci.USA, 117, 2020
6RRJ
DownloadVisualize
BU of 6rrj by Molmil
GOLGI ALPHA-MANNOSIDASE II in complex with 5-(Adamantan-1yl-methoxy)-pentyl 2,5-dideoxy-2,5-imino-D-talo-hexonamide
分子名称: (2~{S},3~{R},4~{S},5~{R})-~{N}-[5-(1-adamantylmethoxy)pentyl]-5-(hydroxymethyl)-3,4-bis(oxidanyl)pyrrolidine-2-carboxamide, 1,2-ETHANEDIOL, Alpha-mannosidase 2, ...
著者Armstrong, Z, Lahav, D, Johnson, R, Kuo, C.L, Beenakker, T.J.M, de Boer, C, Wong, C.S, van Rijssel, E.R, Debets, M, Geurink, P.P, Ovaa, H, van der Stelt, M, Codee, J.D.C, Aerts, J.M.F.G, Wu, L, Overkleeft, H.S, Davies, G.J.
登録日2019-05-20
公開日2020-07-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Manno- epi -cyclophellitols Enable Activity-Based Protein Profiling of Human alpha-Mannosidases and Discovery of New Golgi Mannosidase II Inhibitors.
J.Am.Chem.Soc., 142, 2020
7AK6
DownloadVisualize
BU of 7ak6 by Molmil
Cryo-EM structure of ND6-P25L mutant respiratory complex I from Mus musculus at 3.8 A
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, ADENOSINE-5'-TRIPHOSPHATE, ...
著者Yin, Z, Bridges, H.R, Grba, D, Hirst, J.
登録日2020-09-29
公開日2021-02-03
最終更新日2021-02-10
実験手法ELECTRON MICROSCOPY (3.82 Å)
主引用文献Structural basis for a complex I mutation that blocks pathological ROS production.
Nat Commun, 12, 2021
2MEF
DownloadVisualize
BU of 2mef by Molmil
CONTRIBUTION OF HYDROPHOBIC EFFECT TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME
分子名称: LYSOZYME, SODIUM ION
著者Funahashi, J, Takano, K, Yamagata, Y, Yutani, K.
登録日1998-05-04
公開日1998-07-15
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Contribution of amino acid substitutions at two different interior positions to the conformational stability of human lysozyme
Protein Eng., 12, 1999
6RRU
DownloadVisualize
BU of 6rru by Molmil
GOLGI ALPHA-MANNOSIDASE II in complex with (5R,6R,7S,8S)-5,6,7,8-tetrahydro-5-(hydroxymethyl)-3-(3-phenylpropyl)imidazo[1,2-a]pyridine-6,7,8-triol
分子名称: (5~{R},6~{R},7~{S},8~{S})-5-(hydroxymethyl)-2-(3-phenylpropyl)-5,6,7,8-tetrahydroimidazo[1,2-a]pyridine-6,7,8-triol, Alpha-mannosidase 2, ZINC ION
著者Armstrong, Z, Lahav, D, Johnson, R, Kuo, C.L, Beenakker, T.J.M, de Boer, C, Wong, C.S, van Rijssel, E.R, Debets, M, Geurink, P.P, Ovaa, H, van der Stelt, M, Codee, J.D.C, Aerts, J.M.F.G, Wu, L, Overkleeft, H.S, Davies, G.J.
登録日2019-05-20
公開日2020-07-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Manno- epi -cyclophellitols Enable Activity-Based Protein Profiling of Human alpha-Mannosidases and Discovery of New Golgi Mannosidase II Inhibitors.
J.Am.Chem.Soc., 142, 2020
5AC0
DownloadVisualize
BU of 5ac0 by Molmil
ovis aries Aldehyde Dehydrogenase 1A1 in complex with a duocarmycin analog
分子名称: 1-[(1S)-1-methyl-5-oxidanyl-1,2-dihydrobenzo[e]indol-3-yl]hexan-1-one, MAGNESIUM ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Koch, M.F, Harteis, S, Blank, I.D, Pestel, G, Tietze, L.F, Ochsenfeld, C, Schneider, S, Sieber, S.A.
登録日2015-08-10
公開日2015-08-26
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural, Biochemical, and Computational Studies Reveal the Mechanism of Selective Aldehyde Dehydrogenase 1A1 Inhibition by Cytotoxic Duocarmycin Analogues.
Angew.Chem.Int.Ed.Engl., 54, 2015
2ZOY
DownloadVisualize
BU of 2zoy by Molmil
The multi-drug binding transcriptional repressor CgmR (CGL2612 protein) from C.glutamicum
分子名称: GLYCEROL, Transcriptional regulator
著者Itou, H, Yao, M, Watanabe, N, Tanaka, I.
登録日2008-06-20
公開日2008-07-08
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The CGL2612 protein from Corynebacterium glutamicum is a drug resistance-related transcriptional repressor: structural and functional analysis of a newly identified transcription factor from genomic DNA analysis
J.Biol.Chem., 280, 2005
5XMZ
DownloadVisualize
BU of 5xmz by Molmil
Verticillium effector PevD1
分子名称: CALCIUM ION, CHLORIDE ION, Effector protein PevD1
著者Liu, X, Zhou, R.
登録日2017-05-17
公開日2017-07-05
最終更新日2017-09-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献The asparagine-rich protein NRP interacts with the Verticillium effector PevD1 and regulates the subcellular localization of cryptochrome 2
J. Exp. Bot., 68, 2017
5A9S
DownloadVisualize
BU of 5a9s by Molmil
NADPH complex of Imine Reductase from Amycolatopsis orientalis
分子名称: CALCIUM ION, IMINE REDUCTASE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Man, H, Aleku, G, Turner, N.J, Grogan, G.
登録日2015-07-22
公開日2016-06-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Stereoselectivity and Structural Characterization of an Imine Reductase (IRED) from Amycolatopsis orientalis
Acs Catalysis, 6, 2016
6S0O
DownloadVisualize
BU of 6s0o by Molmil
Crystal Structure of Two-Domain Laccase from Streptomyces griseoflavus produced at 0.25 mM copper sulfate in growth medium
分子名称: 1,2-ETHANEDIOL, COPPER (II) ION, GLYCEROL, ...
著者Gabdulkhakov, A.G, Tishchenko, T.V, Kolyadenko, I.A.
登録日2019-06-17
公開日2019-07-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Investigations of Accessibility of T2/T3 Copper Center of Two-Domain Laccase fromStreptomyces griseoflavusAc-993.
Int J Mol Sci, 20, 2019
6RT9
DownloadVisualize
BU of 6rt9 by Molmil
Orthorhombic lysozyme grown with 300g/L sucrose
分子名称: CHLORIDE ION, Lysozyme C, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose
著者Pereira, P.J.B, Ferreira, C, Martins, P.M.
登録日2019-05-22
公開日2019-06-05
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Protein crystals as a key for deciphering macromolecular crowding effects on biological reactions.
Phys Chem Chem Phys, 22, 2020
7AOA
DownloadVisualize
BU of 7aoa by Molmil
Structure of the extended MTA1/HDAC1/MBD2/RBBP4 NURD deacetylase complex
分子名称: Histone deacetylase 1, Histone-binding protein RBBP4, INOSITOL HEXAKISPHOSPHATE, ...
著者Millard, C.J, Fairall, L, Ragan, T.J, Savva, C.G, Schwabe, J.W.R.
登録日2020-10-14
公開日2020-11-11
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (19.4 Å)
主引用文献The topology of chromatin-binding domains in the NuRD deacetylase complex.
Nucleic Acids Res., 48, 2020
6RTJ
DownloadVisualize
BU of 6rtj by Molmil
Thioredoxin glutathione reductase from Schistosoma mansoni in complex with 1-[(dimethylamino)methyl]-2-naphthol at 1 hour of soaking
分子名称: 1-[(dimethylamino)methyl]naphthalen-2-ol, CALCIUM ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Angelucci, F, Silvestri, I, Fata, F, Williams, D.L.
登録日2019-05-24
公開日2020-01-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Ectopic suicide inhibition of thioredoxin glutathione reductase.
Free Radic Biol Med, 147, 2020
6RTU
DownloadVisualize
BU of 6rtu by Molmil
Piperideine-6-carboxylate dehydrogenase from Streptomyces clavuligerus complexed with alpha-aminoadipic acid
分子名称: 2-AMINOHEXANEDIOIC ACID, ACETATE ION, GLYCEROL, ...
著者Hasse, D, Huelsemann, J, Carlsson, G, Andersson, I.
登録日2019-05-26
公開日2019-12-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure and mechanism of piperideine-6-carboxylate dehydrogenase from Streptomyces clavuligerus.
Acta Crystallogr D Struct Biol, 75, 2019

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon