PDB: 45459 件ウェブページステータス検索Chemie searchBIRD

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7Q98	MHC Class I A02 Allele presenting NLSALGIFST 分子名称: 1,2-ETHANEDIOL, ASN-LEU-SER-ALA-LEU-GLY-ILE-PHE-SER-THR, Beta-2-microglobulin, ... 著者 Rizkallah, P.J, Sewell, A.K. 登録日 2021-11-12 公開日 2023-02-22 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Targeting of multiple tumor-associated antigens by individual T cell receptors during successful cancer immunotherapy. Cell, 186, 2023
7QYA	Proteasome-ZFAND5 Complex Z-B state 分子名称: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ... 著者 Zhu, Y, Lu, Y. 登録日 2022-01-27 公開日 2023-02-08 実験手法 ELECTRON MICROSCOPY (4.8 Å) 主引用文献 Mechanism of 26S proteasome activation by the 19S-interacting protein ZFAND5 To Be Published
8EP9	The capsid structure of Human Parvovirus 4 分子名称: Human Parvovirus 4 著者 Mietzsch, M, McKenna, R. 登録日 2022-10-05 公開日 2022-11-09 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.12 Å) 主引用文献 Capsid Structure of Aleutian Mink Disease Virus and Human Parvovirus 4: New Faces in the Parvovirus Family Portrait. Viruses, 14, 2022
5CZ8	Yeast 20S proteasome beta5-L(-49)S-K33A mutant in complex with Carfilzomib 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, MAGNESIUM ION, ... 著者 Huber, E.M, Groll, M. 登録日 2015-07-31 公開日 2016-03-23 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 A unified mechanism for proteolysis and autocatalytic activation in the 20S proteasome. Nat Commun, 7, 2016
5D0Z	Yeast 20S proteasome beta5-T1S mutant in complex with Carfilzomib 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, MAGNESIUM ION, ... 著者 Huber, E.M, Groll, M. 登録日 2015-08-03 公開日 2016-03-23 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 A unified mechanism for proteolysis and autocatalytic activation in the 20S proteasome. Nat Commun, 7, 2016
7QOI	Unique vertex of the phicrAss001 virion 分子名称: Auxiliary capsid protein gp36, Cargo protein 1 gp45, Head fiber trimer protein gp21, ... 著者 Bayfield, O.W, Shkoporov, A.N, Yutin, N, Khokhlova, E.V, Smith, J.L.R, Hawkins, D.E.D.P, Koonin, E.V, Hill, C, Antson, A.A. 登録日 2021-12-24 公開日 2023-03-29 最終更新日 2023-05-24 実験手法 ELECTRON MICROSCOPY (3.62 Å) 主引用文献 Structural atlas of a human gut crassvirus. Nature, 617, 2023
8TDI	Structure of P2B11 Glucuronide-3-dehydrogenase 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, P2B11 Glucuronide-3-dehydrogenase, ... 著者 Lazarski, A.C, Worrall, L.J, Strynadka, N.C.J. 登録日 2023-07-03 公開日 2024-06-12 最終更新日 2024-07-17 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 An alternative broad-specificity pathway for glycan breakdown in bacteria. Nature, 631, 2024
5DGV	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog 分子名称: 25S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ... 著者 Melnikov, S, Mailliot, J, Shin, B.-S, Rigger, L, Yusupova, G, Micura, R, Dever, T.E, Yusupov, M. 登録日 2015-08-28 公開日 2016-12-14 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome To Be Published
6NQY	Flagellar protein FcpA from Leptospira biflexa / ab-centered monoclinic form 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, Flagellar coiling protein A, ... 著者 Mechaly, A, Larrieux, N, Trajtenberg, F, Buschiazzo, A. 登録日 2019-01-22 公開日 2020-01-29 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 An asymmetric sheath controls flagellar supercoiling and motility in the Leptospira spirochete. Elife, 9, 2020
8G2U	Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Bhattacharjee, S, Brown, P.Z, Frank, J. 登録日 2023-02-06 公開日 2023-12-06 最終更新日 2024-02-14 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Time resolution in cryo-EM using a PDMS-based microfluidic chip assembly and its application to the study of HflX-mediated ribosome recycling. Cell, 187, 2024
8G34	Time-resolved cryo-EM study of the 70S recycling by the HflX:1st intermediate 分子名称: 16S, 23S, 30S ribosomal protein S10, ... 著者 Bhattacharjee, S, Brown, P.Z, Frank, J. 登録日 2023-02-06 公開日 2023-12-06 最終更新日 2024-02-14 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Time resolution in cryo-EM using a PDMS-based microfluidic chip assembly and its application to the study of HflX-mediated ribosome recycling. Cell, 187, 2024
8TPJ	Top cylinder bound to OCP from high-resolution phycobilisome quenched by OCP (local refinement) 分子名称: Allophycocyanin alpha chain, Allophycocyanin beta chain, Orange carotenoid-binding protein, ... 著者 Sauer, P.V, Sutter, M, Cupellini, L. 登録日 2023-08-04 公開日 2024-04-17 実験手法 ELECTRON MICROSCOPY (2.1 Å) 主引用文献 Structural and quantum chemical basis for OCP-mediated quenching of phycobilisomes. Sci Adv, 10, 2024
8G38	Time-resolved cryo-EM study of the 70S recycling by the HflX:3rd Intermediate 分子名称: 16S, 23S, 30S ribosomal protein S10, ... 著者 Bhattacharjee, S, Brown, P.Z, Frank, J. 登録日 2023-02-07 公開日 2023-12-06 最終更新日 2024-02-14 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Time resolution in cryo-EM using a PDMS-based microfluidic chip assembly and its application to the study of HflX-mediated ribosome recycling. Cell, 187, 2024
6NSZ	X-ray reduced Catalase 3 from N.Crassa (0.526 MGy) 分子名称: 1,2-ETHANEDIOL, ACETATE ION, Catalase-3, ... 著者 Zarate-Romero, A, Rudino-Pinera, E, Stojanoff, V. 登録日 2019-01-27 公開日 2019-05-01 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 X-ray driven reduction of Cpd I of Catalase-3 from N. crassa reveals differential sensitivity of active sites and formation of ferrous state. Arch.Biochem.Biophys., 666, 2019
7QTT	Structural organization of a late activated human spliceosome (Baqr, core region) 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, BUD13 homolog, Cell division cycle 5-like protein, ... 著者 Cretu, C, Pena, V. 登録日 2022-01-15 公開日 2023-05-10 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural basis of catalytic activation in human splicing. Nature, 617, 2023
5CZ7	Yeast 20S proteasome beta5-T1A beta5-K81R double mutant in complex with Bortezomib, propeptide expressed in cis 分子名称: CHLORIDE ION, MAGNESIUM ION, N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE, ... 著者 Huber, E.M, Groll, M. 登録日 2015-07-31 公開日 2016-03-23 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 A unified mechanism for proteolysis and autocatalytic activation in the 20S proteasome. Nat Commun, 7, 2016
1DQA	COMPLEX OF THE CATALYTIC PORTION OF HUMAN HMG-COA REDUCTASE WITH HMG, COA, AND NADP+ 分子名称: 3-HYDROXY-3-METHYL-GLUTARIC ACID, COENZYME A, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ... 著者 Istvan, E.S, Palnitkar, M, Buchanan, S.K, Deisenhofer, J. 登録日 1999-12-30 公開日 2000-03-08 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structure of the catalytic portion of human HMG-CoA reductase: insights into regulation of activity and catalysis. EMBO J., 19, 2000
5D0X	Yeast 20S proteasome beta5-T1S mutant in complex with Bortezomib 分子名称: CHLORIDE ION, MAGNESIUM ION, N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE, ... 著者 Huber, E.M, Groll, M. 登録日 2015-08-03 公開日 2016-03-23 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 A unified mechanism for proteolysis and autocatalytic activation in the 20S proteasome. Nat Commun, 7, 2016
8TTJ	Tryptophan-6-halogenase BorH complexed with 6-chlorotryptophan 分子名称: 6-CHLORO-L-TRYPTOPHAN, SULFATE ION, Tryptophan 6-halogenase 著者 Lingkon, K, Bellizzi, J.J. 登録日 2023-08-14 公開日 2023-08-30 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.98 Å) 主引用文献 Crystallographic and thermodynamic evidence of negative cooperativity of flavin and tryptophan binding in the flavin-dependent halogenases AbeH and BorH. Biorxiv, 2023
8EYZ	Engineered glutamine binding protein bound to GLN and a cobaloxime ligand 分子名称: AZIDOBIS (DIMETHYLGLYOXIMATO) PYRIDINECOBALT, Amino acid ABC transporter substrate-binding protein, GLUTAMINE, ... 著者 Bridwell-Rabb, J, Boggs, D.G, Olshansky, L, Fatima, S, Thompson, P. 登録日 2022-10-29 公開日 2022-11-23 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.99 Å) 主引用文献 Engineering a Conformationally Switchable Artificial Metalloprotein. J.Am.Chem.Soc., 144, 2022
8TU2	The Capsid of Rat Bocavirus 分子名称: VP2 著者 Velez, M, Mietzsch, M, McKenna, R. 登録日 2023-08-15 公開日 2023-08-30 最終更新日 2023-10-11 実験手法 ELECTRON MICROSCOPY (2.52 Å) 主引用文献 Structural Characterization of Canine Minute Virus, Rat and Porcine Bocavirus. Viruses, 15, 2023
8EUG	Ytm1 associated nascent 60S ribosome State 3 分子名称: 60S ribosomal protein L10-A, 60S ribosomal protein L11-A, 60S ribosomal protein L13, ... 著者 Zhou, X, Bilokapic, S, Deshmukh, A.A, Halic, M. 登録日 2022-10-18 公開日 2022-11-30 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Chromatin localization of nucleophosmin organizes ribosome biogenesis. Mol.Cell, 82, 2022
8G6F	Structure of the Plasmodium falciparum 20S proteasome beta-6 A117D mutant complexed with inhibitor WLW-vs 分子名称: (2S)-N-[(E,2S)-1-(1H-indol-3-yl)-4-methylsulfonyl-but-3-en-2-yl]-2-[[(2S)-3-(1H-indol-3-yl)-2-(2-morpholin-4-ylethanoylamino)propanoyl]amino]-4-methyl-pentanamide, Proteasome endopeptidase complex, Proteasome subunit alpha type-1, ... 著者 Hsu, H.-C, Li, H. 登録日 2023-02-15 公開日 2023-12-20 最終更新日 2024-01-03 実験手法 ELECTRON MICROSCOPY (2.58 Å) 主引用文献 Structures revealing mechanisms of resistance and collateral sensitivity of Plasmodium falciparum to proteasome inhibitors. Nat Commun, 14, 2023
8ESQ	Ytm1 associated nascent 60S ribosome State 2 分子名称: 25S rRNA (cytosine-C(5))-methyltransferase nop2, 60S ribosomal protein L13, 60S ribosomal protein L14, ... 著者 Zhou, X, Bilokapic, S, Deshmukh, A.A, Halic, M. 登録日 2022-10-14 公開日 2022-11-30 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Chromatin localization of nucleophosmin organizes ribosome biogenesis. Mol.Cell, 82, 2022
8G31	Time-resolved cryo-EM study of the 70S recycling by the HflX:2nd Intermediate 分子名称: 16S, 23S, 30S ribosomal protein S10, ... 著者 Bhattacharjee, S, Brown, P.Z, Frank, J. 登録日 2023-02-06 公開日 2023-12-06 最終更新日 2024-02-14 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Time resolution in cryo-EM using a PDMS-based microfluidic chip assembly and its application to the study of HflX-mediated ribosome recycling. Cell, 187, 2024

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