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4RDO
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BU of 4rdo by Molmil
Structure of YTH-YTHDF2 in the free state
分子名称: SULFATE ION, YTH domain-containing family protein 2
著者Li, F.D, Zhao, D.B, Wu, J.H, Shi, Y.Y.
登録日2014-09-19
公開日2014-12-24
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structure of the YTH domain of human YTHDF2 in complex with an m(6)A mononucleotide reveals an aromatic cage for m(6)A recognition.
Cell Res., 24, 2014
4RDN
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BU of 4rdn by Molmil
Structure of YTH-YTHDF2 in complex with m6A
分子名称: N-methyladenosine, SULFATE ION, YTH domain-containing family protein 2
著者Li, F.D, Zhao, D.B, Wu, J.H, Shi, Y.Y.
登録日2014-09-19
公開日2014-12-24
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of the YTH domain of human YTHDF2 in complex with an m(6)A mononucleotide reveals an aromatic cage for m(6)A recognition.
Cell Res., 24, 2014
5YII
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BU of 5yii by Molmil
Crystal Structure of 45 amino acid deleted from N-terminal of Phosphoserine Aminotransferase (PSAT) of Entamoeba histolytica
分子名称: Phosphoserine aminotransferase, THIOCYANATE ION
著者Singh, R.K, Gourinath, S.
登録日2017-10-04
公開日2018-10-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献N-terminal residues are crucial for quaternary structure and active site conformation for the phosphoserine aminotransferase from enteric human parasite E. histolytica.
Int.J.Biol.Macromol., 132, 2019
4R2Z
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BU of 4r2z by Molmil
Molecular Analysis of the PDZ4 Domain of Mouse PDZK1
分子名称: 2-(2-METHOXYETHOXY)ETHANOL, GLYCEROL, Na(+)/H(+) exchange regulatory cofactor NHE-RF3
著者Birrane, G, Kocher, O, Krieger, M.
登録日2014-08-13
公開日2015-08-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Molecular Analysis of the PDZ4 domain from Mouse PDZK1
To be Published
7CPU
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BU of 7cpu by Molmil
Cryo-EM structure of 80S ribosome from mouse kidney
分子名称: 40S ribosomal protein S10, 40S ribosomal protein S11, 40S ribosomal protein S13, ...
著者Huo, Y.G, He, X, Jiang, T, Qin, Y, Guo, X.J, Sha, J.H.
登録日2020-08-08
公開日2022-02-02
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.82 Å)
主引用文献A male germ-cell-specific ribosome controls male fertility.
Nature, 612, 2022
7N85
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BU of 7n85 by Molmil
Inner ring spoke from the isolated yeast NPC
分子名称: Nucleoporin ASM4, Nucleoporin NIC96, Nucleoporin NSP1, ...
著者Akey, C.W, Rout, M.P, Ouch, C, Echevarria, I, Fernandez-Martinez, J, Nudelman, I.
登録日2021-06-13
公開日2022-01-26
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (7.6 Å)
主引用文献Comprehensive structure and functional adaptations of the yeast nuclear pore complex.
Cell, 185, 2022
4RMM
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BU of 4rmm by Molmil
Crystal Structure of the Q7NVP2_CHRVO protein from Chromobacterium violaceum. Northeast Structural Genomics Consortium Target CvR191
分子名称: Putative uncharacterized protein
著者Vorobiev, S, Su, M, Seetharaman, J, Mao, L, Xiao, R, Ciccosanti, C, Foote, E.L, Wang, D, Everett, J.K, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2014-10-21
公開日2014-11-05
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure of the Q7NVP2_CHRVO protein from Chromobacterium violaceum.
To be Published
3MHK
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BU of 3mhk by Molmil
Human tankyrase 2 - catalytic PARP domain in complex with 2-(2-pyridyl)-7,8-dihydro-5h-thiino[4,3-d]pyrimidin-4-ol
分子名称: 2-pyridin-2-yl-7,8-dihydro-5H-thiopyrano[4,3-d]pyrimidin-4-ol, GLYCEROL, Tankyrase-2, ...
著者Karlberg, T, Schutz, P, Arrowsmith, C.H, Berglund, H, Bountra, C, Collins, R, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, I, Kotenyova, T, Markova, N, Moche, M, Nordlund, P, Nyman, T, Persson, C, Siponen, M.I, Svensson, L, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Weigelt, J, Welin, M, Wisniewska, M, Schuler, H, Structural Genomics Consortium (SGC)
登録日2010-04-08
公開日2010-05-05
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Family-wide chemical profiling and structural analysis of PARP and tankyrase inhibitors
Nat.Biotechnol., 30, 2012
7EWP
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BU of 7ewp by Molmil
Cryo-EM structure of human GPR158 in complex with RGS7-Gbeta5 in a 2:1:1 ratio
分子名称: Guanine nucleotide-binding protein subunit beta-5, Probable G-protein coupled receptor 158, Regulator of G-protein signaling 7
著者Kim, Y, Jeong, E, Jeong, J, Cho, Y.
登録日2021-05-25
公開日2021-12-01
最終更新日2024-11-06
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Structure of the class C orphan GPCR GPR158 in complex with RGS7-G beta 5.
Nat Commun, 12, 2021
7EWR
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BU of 7ewr by Molmil
Cryo-EM structure of human GPR158 in complex with RGS7-Gbeta5 in a 2:2:2 ratio
分子名称: Guanine nucleotide-binding protein subunit beta-5, Probable G-protein coupled receptor 158, Regulator of G-protein signaling 7
著者Kim, Y, Jeong, E, Jeong, J, Cho, Y.
登録日2021-05-26
公開日2021-12-01
最終更新日2022-02-16
実験手法ELECTRON MICROSCOPY (4.7 Å)
主引用文献Structure of the class C orphan GPCR GPR158 in complex with RGS7-G beta 5.
Nat Commun, 12, 2021
7VF8
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BU of 7vf8 by Molmil
Crystal Structure of HasAp with Co-5-octaethyloxaporphyrinium cation
分子名称: CITRIC ACID, Co-5-octaethyloxaporphyrinium cation, DI(HYDROXYETHYL)ETHER, ...
著者Takiguchi, A, Sakakibara, E, Sugimoto, H, Shoji, O, Shinokubo, H.
登録日2021-09-10
公開日2022-09-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Crystal Structure of HasAp with Co-5-octaethyloxaporphyrinium cation
To Be Published
3X2S
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BU of 3x2s by Molmil
Crystal structure of pyrene-conjugated adenylate kinase
分子名称: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, MAGNESIUM ION, ...
著者Fujii, A, Sekiguchi, Y, Matsumura, H, Inoue, T, Chung, W.-S, Hirota, S, Matsuo, T.
登録日2014-12-31
公開日2015-04-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Excimer Emission Properties on Pyrene-Labeled Protein Surface: Correlation between Emission Spectra, Ring Stacking Modes, and Flexibilities of Pyrene Probes.
Bioconjug.Chem., 26, 2015
5VN9
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BU of 5vn9 by Molmil
Structure of bacteriorhodopsin from crystals grown at 4 deg C using GlyNCOC15+4 as an LCP host lipid
分子名称: Bacteriorhodopsin
著者Ishchenko, A, Peng, L, Zinovev, E, Vlasov, A, Lee, S.C, Kuklin, A, Mishin, A, Borshchevskiy, V, Zhang, Q, Cherezov, V.
登録日2017-04-28
公開日2017-07-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.594 Å)
主引用文献Chemically Stable Lipids for Membrane Protein Crystallization.
Cryst Growth Des, 17, 2017
5VXF
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BU of 5vxf by Molmil
Crystal structure of Xanthomonas campestris OleA E117Q
分子名称: 3-oxoacyl-[ACP] synthase III, GLYCEROL
著者Jensen, M.R, Wilmot, C.M.
登録日2017-05-23
公開日2017-10-25
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献OleA Glu117 is key to condensation of two fatty-acyl coenzyme A substrates in long-chain olefin biosynthesis.
Biochem. J., 474, 2017
5VXD
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BU of 5vxd by Molmil
Crystal structure of Xanthomonas campestris OleA E117A
分子名称: 3-oxoacyl-[ACP] synthase III, GLYCEROL
著者Jensen, M.R, Wilmot, C.M.
登録日2017-05-23
公開日2017-10-25
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.968 Å)
主引用文献OleA Glu117 is key to condensation of two fatty-acyl coenzyme A substrates in long-chain olefin biosynthesis.
Biochem. J., 474, 2017
5A6L
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BU of 5a6l by Molmil
High resolution structure of the thermostable glucuronoxylan endo-Beta-1, 4-xylanase, CtXyn30A, from Clostridium thermocellum with two xylobiose units bound
分子名称: CARBOHYDRATE BINDING FAMILY 6, DI(HYDROXYETHYL)ETHER, PHOSPHATE ION, ...
著者Freire, F, Verma, A.K, Bule, P, Goyal, A, Fontes, C.M.G.A, Najmudin, S.
登録日2015-06-30
公開日2016-10-19
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Conservation in the Mechanism of Glucuronoxylan Hydrolysis Revealed by the Structure of Glucuronoxylan Xylano-Hydrolase (Ctxyn30A) from Clostridium Thermocellum
Acta Crystallogr.,Sect.D, 72, 2016
4ZEF
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BU of 4zef by Molmil
Crystal structure of substrate binding domain 2 (SBD2) OF ABC transporter GLNPQ from Enterococcus faecalis
分子名称: Amino acid ABC transporter amino acid-binding/permease, GLUTAMINE
著者Fulyani, F, Guskov, A, Poolman, B.
登録日2015-04-20
公開日2016-06-29
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal structure of substrate binding domain 2 (SBD2) OF ABC transporter GLNPQ from Enterococcus faecalis
To Be Published
2XDC
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BU of 2xdc by Molmil
Structure of linear gramicidin D obtained using Type I crystals grown in a lipid cubic phase.
分子名称: GRAMICIDIN A, POLYETHYLENE GLYCOL (N=34), SODIUM ION
著者Hoefer, N, Aragao, D, Caffrey, M.
登録日2010-04-30
公開日2010-08-11
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystallizing Transmembrane Peptides in Lipidic Mesophases
Biophys.J., 99, 2010
5A6M
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BU of 5a6m by Molmil
Determining the specificities of the catalytic site from the very high resolution structure of the thermostable glucuronoxylan endo-Beta-1, 4-xylanase, CtXyn30A, from Clostridium thermocellum with a xylotetraose bound
分子名称: CARBOHYDRATE BINDING FAMILY 6, DI(HYDROXYETHYL)ETHER, PHOSPHATE ION, ...
著者Freire, F, Verma, A.K, Bule, P, Goyal, A, Fontes, C.M.G.A, Najmudin, S.
登録日2015-06-30
公開日2016-10-19
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.17 Å)
主引用文献Conservation in the Mechanism of Glucuronoxylan Hydrolysis Revealed by the Structure of Glucuronoxylan Xylano-Hydrolase (Ctxyn30A) from Clostridium Thermocellum
Acta Crystallogr.,Sect.D, 72, 2016
5G52
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BU of 5g52 by Molmil
Crystallographic structure of full particle of Deformed Wing Virus
分子名称: URIDINE-5'-MONOPHOSPHATE, VP1, VP2, ...
著者Skubnik, K, Novacek, J, Fuzik, T, Pridal, A, Paxton, R, Plevka, P.
登録日2016-05-18
公開日2017-03-22
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.802 Å)
主引用文献Structure of deformed wing virus, a major honey bee pathogen.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5VN7
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BU of 5vn7 by Molmil
Structure of bacteriorhodopsin from crystals grown at 20 deg Celcius using GlyNCOC15+4 as an LCP host lipid
分子名称: Bacteriorhodopsin
著者Ishchenko, A, Peng, L, Zinovev, E, Vlasov, A, Lee, S.C, Kuklin, A, Mishin, A, Borshchevskiy, V, Zhang, Q, Cherezov, V.
登録日2017-04-28
公開日2017-07-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Chemically Stable Lipids for Membrane Protein Crystallization.
Cryst Growth Des, 17, 2017
3A5S
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BU of 3a5s by Molmil
Benzalacetone synthase (I207L/L208F)
分子名称: Benzalacetone synthase
著者Morita, H, Kato, R, Abe, I, Sugio, S, Kohno, T.
登録日2009-08-10
公開日2010-01-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A structure-based mechanism for benzalacetone synthase from Rheum palmatum
Proc.Natl.Acad.Sci.USA, 107, 2010
1UFO
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BU of 1ufo by Molmil
Crystal Structure of TT1662 from Thermus thermophilus
分子名称: hypothetical protein TT1662
著者Murayama, K, Shirouzu, M, Terada, T, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-06-03
公開日2003-12-03
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of TT1662 from Thermus thermophilus HB8: a member of the alpha/beta hydrolase fold enzymes.
Proteins, 58, 2005
1V4S
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BU of 1v4s by Molmil
Crystal structure of human glucokinase
分子名称: 2-AMINO-4-FLUORO-5-[(1-METHYL-1H-IMIDAZOL-2-YL)SULFANYL]-N-(1,3-THIAZOL-2-YL)BENZAMIDE, SODIUM ION, alpha-D-glucopyranose, ...
著者Kamata, K, Mitsuya, M, Nishimura, T, Eiki, J, Nagata, Y.
登録日2003-11-19
公開日2004-03-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for allosteric regulation of the monomeric allosteric enzyme human glucokinase
Structure, 12, 2004
1ALX
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BU of 1alx by Molmil
GRAMICIDIN D FROM BACILLUS BREVIS (METHANOL SOLVATE)
分子名称: GRAMICIDIN A, METHANOL
著者Burkhart, B.M, Langs, D.A, Smith, G.D, Courseille, C, Precigoux, G, Hospital, M, Pangborn, W.A, Duax, W.L.
登録日1997-06-05
公開日1998-03-04
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Heterodimer Formation and Crystal Nucleation of Gramicidin D
Biophys.J., 75, 1998

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