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1X1K
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Host-guest peptide (Pro-Pro-Gly)4-(Pro-alloHyp-Gly)-(Pro-Pro-Gly)4
分子名称: Host-guest peptide (Pro-Pro-Gly)4-(Pro-alloHyp-Gly)-(Pro-Pro-Gly)4
著者Jiravanichanun, N, Hongo, C, Wu, G, Noguchi, K, Okuyama, K, Nishino, N, Silva, T.
登録日2005-04-05
公開日2005-06-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Unexpected puckering of hydroxyproline in the guest triplets, hyp-pro-gly and pro-allohyp-gly sandwiched between pro-pro-gly sequence
Chembiochem, 6, 2005
1X1L
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Interaction of ERA,a GTPase protein, with the 3'minor domain of the 16S rRNA within the THERMUS THERMOPHILUS 30S subunit.
分子名称: GTP-binding protein era, RNA (130-MER)
著者Sharma, M.R, Barat, C, Agrawal, R.K.
登録日2005-04-06
公開日2005-05-17
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (13.5 Å)
主引用文献Interaction of Era with the 30S Ribosomal Subunit Implications for 30S Subunit Assembly
Mol.Cell, 18, 2005
1X1M
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Solution Structure of the N-terminal Ubiquitin-like Domain in Mouse Ubiquitin-like Protein SB132
分子名称: Ubiquitin-like protein SB132
著者Zhao, C, Tomizawa, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-04-07
公開日2005-10-07
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution Structure of the N-terminal Ubiquitin-like Domain in Mouse Ubiquitin-like Protein SB132
To be Published
1X1N
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Structure determination and refinement at 1.8 A resolution of Disproportionating Enzyme from Potato
分子名称: 4-alpha-glucanotransferase, CALCIUM ION, GLYCEROL
著者Imamura, K, Matsuura, T, Takaha, T, Fujii, K, Nakagawa, A, Kusunoki, M, Nitta, Y.
登録日2005-04-08
公開日2006-04-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure determination and refinement at 1.8 A resolution of Disproportionating Enzyme from Potato
to be published
1X1O
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Crystal structure of project ID TT0268 from Thermus thermophilus HB8
分子名称: nicotinate-nucleotide pyrophosphorylase
著者Shimizu, K, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-04-08
公開日2006-04-04
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of project ID TT0268 from Thermus thermophilus HB8
To be Published
1X1P
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Crystal structure of Tk-RNase HII(1-197)-A(28-42)
分子名称: Ribonuclease HII
著者Takano, K, Endo, S, Mukaiyama, A, Chon, H, Matsumura, H, Koga, Y, Kanaya, S.
登録日2005-04-11
公開日2006-01-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of amyloid beta fragments in aqueous environments
Febs J., 273, 2006
1X1Q
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Crystal structure of tryptophan synthase beta chain from Thermus thermophilus HB8
分子名称: CHLORIDE ION, tryptophan synthase beta chain
著者Asada, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-04-11
公開日2006-08-01
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of tryptophan synthase beta chain from Thermus thermophilus HB8
To be Published
1X1R
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Crystal structure of M-Ras in complex with GDP
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Ras-related protein M-Ras
著者Ye, M, Shima, F, Muraoka, S, Liao, J, Okamoto, H, Yamamoto, M, Tamura, A, Yagi, N, Ueki, T, Kataoka, T.
登録日2005-04-12
公開日2005-07-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal Structure of M-Ras Reveals a GTP-bound "Off" State Conformation of Ras Family Small GTPases
J.Biol.Chem., 280, 2005
1X1S
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Crystal structure of M-Ras in complex with GppNHp
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Ras-related protein M-Ras
著者Ye, M, Shima, F, Muraoka, S, Liao, J, Okamoto, H, Yamamoto, M, Tamura, A, Yagi, N, Ueki, T, Kataoka, T.
登録日2005-04-13
公開日2005-07-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure of M-Ras Reveals a GTP-bound "Off" State Conformation of Ras Family Small GTPases
J.Biol.Chem., 280, 2005
1X1T
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Crystal Structure of D-3-Hydroxybutyrate Dehydrogenase from Pseudomonas fragi Complexed with NAD+
分子名称: CACODYLATE ION, D(-)-3-hydroxybutyrate dehydrogenase, MAGNESIUM ION, ...
著者Ito, K, Nakajima, Y, Ichihara, E, Ogawa, K, Yoshimoto, T.
登録日2005-04-13
公開日2006-01-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献d-3-Hydroxybutyrate Dehydrogenase from Pseudomonas fragi: Molecular Cloning of the Enzyme Gene and Crystal Structure of the Enzyme
J.Mol.Biol., 355, 2006
1X1U
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Water-mediate interaction at aprotein-protein interface
分子名称: Barstar, Ribonuclease
著者Ikura, T, Urakubo, Y, Ito, N.
登録日2005-04-13
公開日2005-04-26
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Water-mediated interaction at a protein-protein interface
Chem.Phys., 307, 2004
1X1V
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Structure Of Banana Lectin- Methyl-Alpha-Mannose Complex
分子名称: HEXANE-1,6-DIOL, ZINC ION, lectin, ...
著者Singh, D.D, Saikrishnan, K, Kumar, P, Surolia, A, Sekar, K, Vijayan, M.
登録日2005-04-14
公開日2005-11-08
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Unusual sugar specificity of banana lectin from Musa paradisiaca and its probable evolutionary origin. Crystallographic and modelling studies
Glycobiology, 15, 2005
1X1W
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Water-mediate interaction at aprotein-protein interface
分子名称: Barstar, Ribonuclease
著者Ikura, T, Urakubo, Y, Ito, N.
登録日2005-04-14
公開日2005-04-26
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Water-mediated interaction at a protein-protein interface
Chem.Phys., 307, 2004
1X1X
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BU of 1x1x by Molmil
Water-mediate interaction at aprotein-protein interface
分子名称: Barstar, Ribonuclease
著者Ikura, T, Urakubo, Y, Ito, N.
登録日2005-04-15
公開日2005-04-26
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Water-mediated interaction at a protein-protein interface
Chem.Phys., 307, 2004
1X1Y
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Water-mediate interaction at aprotein-protein interface
分子名称: Barstar, Ribonuclease
著者Ikura, T, Urakubo, Y, Ito, N.
登録日2005-04-15
公開日2005-04-26
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Water-mediated interaction at a protein-protein interface
Chem.Phys., 307, 2004
1X1Z
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Orotidine 5'-monophosphate decarboxylase (odcase) complexed with BMP (produced from 6-cyanoump)
分子名称: 6-HYDROXYURIDINE-5'-PHOSPHATE, GLYCEROL, Orotidine 5'-phosphate decarboxylase
著者Fujihashi, M, Bello, A.M, Poduch, E, Wei, L, Annedi, S.C, Pai, E.F, Kotra, L.P.
登録日2005-04-15
公開日2005-12-06
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献An unprecedented twist to ODCase catalytic activity
J.Am.Chem.Soc., 127, 2005
1X22
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Solution structure of a novel moricin analogue, an antibacterial peptide from a lepidopteran insect, Spodoptera litura
分子名称: moricin
著者Oizumi, Y, Hemmi, H, Minami, M, Asaoka, A, Yamakawa, M.
登録日2005-04-18
公開日2005-09-06
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Isolation, gene expression and solution structure of a novel moricin analogue, antibacterial peptide from a lepidopteran insect, Spodoptera litura
Biochim.Biophys.Acta, 1752, 2005
1X23
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Crystal structure of ubch5c
分子名称: Ubiquitin-conjugating enzyme E2 D3
著者Nakanishi, M, Teshima, N, Mizushima, T, Murata, S, Tanaka, K, Yamane, T.
登録日2005-04-19
公開日2005-05-03
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure of ubch5c
To be Published
1X24
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Prl-1 (ptp4a)
分子名称: protein tyrosine phosphatase 4a1
著者Zhang, Z.Y, Sun, J.P, Liu, S, Wang, W.Q, Yang, H.
登録日2005-04-20
公開日2005-10-11
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structure and Biochemical Properties of PRL-1, a Phosphatase Implicated in Cell Growth, Differentiation, and Tumor Invasion(,)
Biochemistry, 44, 2005
1X25
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Crystal Structure of a Member of YjgF Family from Sulfolobus Tokodaii (ST0811)
分子名称: Hypothetical UPF0076 protein ST0811
著者Miyakawa, T, Lee, W.C, Hatano, K, Kato, Y, Sawano, Y, Miyazono, K, Nagata, K, Tanokura, M.
登録日2005-04-20
公開日2006-02-07
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the YjgF/YER057c/UK114 family protein from the hyperthermophilic archaeon Sulfolobus tokodaii strain 7
Proteins, 62, 2006
1X26
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Solution structure of the AA-mismatch DNA complexed with naphthyridine-azaquinolone
分子名称: 5'-D(*CP*AP*TP*TP*CP*AP*GP*TP*TP*AP*G)-3', 5'-D(*CP*TP*AP*AP*CP*AP*GP*AP*AP*TP*G)-3', N~3~-{3-[(7-METHYL-1,8-NAPHTHYRIDIN-2-YL)AMINO]-3-OXOPROPYL}-N~1~-[(7-OXO-7,8-DIHYDRO-1,8-NAPHTHYRIDIN-2-YL)METHYL]-BET A-ALANINAMIDE
著者Nakatani, K, Hagihara, S, Goto, Y, Kobori, A, Hagihara, M, Hayashi, G, Kyo, M, Nomura, M, Mishima, M, Kojima, C.
登録日2005-04-20
公開日2006-04-04
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Small-molecule ligand induces nucleotide flipping in (CAG)n trinucleotide repeats
Nat.Chem.Biol., 1, 2005
1X27
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Crystal Structure of Lck SH2-SH3 with SH2 binding site of p130Cas
分子名称: CRK-associated substrate, Proto-oncogene tyrosine-protein kinase LCK, SODIUM ION
著者Nasertorabi, F, Tars, K, Becherer, K, Kodandapani, R, Liljas, L, Vuori, K, Ely, K.R.
登録日2005-04-20
公開日2006-02-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Molecular basis for regulation of Src by the docking protein p130Cas
J.MOL.RECOG., 19, 2006
1X28
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Crystal Structure of e.coli AspAT complexed with N-phosphopyridoxyl-L-glutamic acid
分子名称: Aspartate aminotransferase, N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)-L-glutamic acid
著者Goto, M.
登録日2005-04-21
公開日2005-06-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Binding of C5-dicarboxylic substrate to aspartate aminotransferase: implications for the conformational change at the transaldimination step.
Biochemistry, 44, 2005
1X29
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Crystal Structure of e.coli AspAT complexed with N-phosphopyridoxyl-2-methyl-L-glutamic acid
分子名称: Aspartate aminotransferase, N-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)-2-METHYL-L-GLUTAMIC ACID
著者Goto, M.
登録日2005-04-21
公開日2005-06-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Binding of C5-dicarboxylic substrate to aspartate aminotransferase: implications for the conformational change at the transaldimination step.
Biochemistry, 44, 2005
1X2A
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Crystal Structure of e.coli AspAT complexed with N-phosphopyridoxyl-D-glutamic acid
分子名称: Aspartate aminotransferase, N-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)-D-GLUTAMIC ACID
著者Goto, M.
登録日2005-04-21
公開日2005-06-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Binding of C5-dicarboxylic substrate to aspartate aminotransferase: implications for the conformational change at the transaldimination step.
Biochemistry, 44, 2005

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